Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200004"

Accession numberr200004 [export]
Locus namereplicase readthrough
Recode1 namepol_r_vir_mnesv
Descriptionviral or mobile polyprotein
Recode statusProvisional

Organism

Genomic classViral Genome (Virus)
OrganismMaize necrotic streak virus [details]

Sequence

GenBank IDsAF266518.1
SequenceRNA of 2367 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 802)
Descriptionproduction of fusion protein and set the ratio between two protein products. MNeSV; Accession no. AF266518
ATGGAGCTCC TCAACAAGCT CTTTGGCACG GAGAGGCCTA TATATGTGGG TGATTTTGCA ATAGGGGTCA ACAAACCGAG AAACATCGAT ATGTTTGACC TCGTTTGCAG ACTGGCTCTC AAATATATTA GGACGGGACG TGTGGAGCGG GACGTGGGCA CCCTTACGGA ATTCCTGGTG GTCATCGCGA AGAATGACTG TGCTGCCAAG TGGGACTGGT TGATGCGGCG TGGCAAAGGG AGGGATTACA TCAAACCTGC CATAGTGGCA GGCATTGGTA TCCTGCTCCC TCTGCTATTC GCCAAACGCT GGTACACTAG GATGGCAACA GCCGTTGTGA CCCTCCCATT AACAGCTGTG GCTACTTACG CCACACTGCC AAGGGAGAGT CTGTCAGCGT TCAAGATGCG TAAGGAGGCC ATGGCGGACA TGGGGGACGA GAGTGACGCA ACCGAATGCT TAGAGGTATG GAAGGCAAAA TCAATCAAGG GACCTGATGG TGAGGAGGTG GTTACAGGCA GTCGCATTAC TAGGGTAGTA GCGAAAGTGA AACCCAGACG CAACCGCTAT GCCGCCAAGA TCGCCCAAGT CGCTAGATCT AAGGTAGGTT ACCTCAGCAA CACACCCGAG AACAGACTTA TCTATCAGAG GGTTCTCATA GAGATAATGG ACAAGGACTG CGTTAGGTAC TGTGACAGGG ATGCCCTGTT ACCTGTAGCT ATCGGGCTTT GTTTCGTATA CCAGGAAGGT GTGAGGGAAG CGTCTCAACT CTGGGGCTCT ACGGAGTCCC TGGGGTTGAA ATAGGGAGGC CTAGTGCGCC TGCCTGGCAC TGTGACACGC ATCAACAATG ATATCCCATC CGGTGTCTTA CAGAGTCAGG AGGTGTTTCA GGTCCGCATA GGACCTCCCG TATCCAAGGA GCGCAGTATA TACATGGTTT CAGGTTGTCC ATCACAGGCG CGCTTCTTGG TTCACAATCA TTGCCTGGCA AACCTGAAAA GGGGTCTTGT GGAGAGGGTT TTCTGTGTCG AGAAAAACGG GAAACTCGTT CGCACTCCAC AACCTGCTAA AGGAGCCTTT GCTAGTCTTT CCCCGTTCAG GAAAGCGGTA GTGGAAGAGG TCGGAACTGC CCACCGCCTT GGTTATGACG GGTTTCTGTC ATACTATAGC GGCGCGAAGT TGCGTACTTA TTCGAATGCC GTGGAGAGTT TGCATATCCA ATCTGTAAAC GAGAGAGATA GTCATCTGAC AACTTTCGTT AAAGCAGAGA AGATATCGAC TAGCAAAGGT GACCCAGCGC CTAGGGTGAT CCAGCCTCGA TCACCTAGGT ACAATGTTGA GTTGGGGCGT TATCTGCGGC ATTTAGAGTC CAAGTTGATG AAAGCCGTTG ACACTGTATA TGGTGAGACC ACGTGCATTA AAGGATACAC AGCCGATGAG GTTGGCATGA TCTTCAAGAA CAAGTGGGAC AGGTTTCACA AGCCTGTTGC CATTGGCCTT GACGCCTCAC GGTTTGATCA GCACTGCTCT GTGGAGGCCC TCCAGTTTGA ACATGGGTTC TACAAGGCAC TTTACCCCAA TAATAAGCTC TTGGACAAAT TGTTGTCTTG GCAGTTGGTT AATAAAGGAA AGGGGTATGT ACCTGATGGT GGAATTTCCT ATGTAAAAGA GGGTTGTCGC ATGAGTGGGG ACATCAATAC CTCTTTAGGT AATTATTTGC TGATGTGTTC TATGGTGTAT GGGTTTATGA GATTCGTGGG CATCAACGAG TACAGCCTCG CCAATTGTGG TGATGACTGT GTGCTAATTG TCGAATCTCG TAACTTGGAT CAGGTTCAGT CTAAACTCCC GGAATATTTT TTTAGGCTTG GTTTCACCAT GAAGGTGGAG AAGCCTGTGT ATTATCTCGA GGAGATTGAG TTTTGCCAAG CCCACCCAGT ACAGTTTCAA GGCGGTTGGA AGATGGTTCG TAATGTCAGA ACGGCCATGT CTAAGGATGT ACACTGTGTC AACAATATAC GTGATATACC AACGCGTAAG GCCTGGAGTA ATGCACAGCA TGTGGGAGGC ATGGCCCTCT CATCTGGCAT ACCAGTGGTA GAGACCTTCT ACTCACGCTT CAGGACCTAT GATGTTGTAA AACACCAGAG AATTGACACA GTCACAAACC AACATAAGTG GCGTGGTGCC GGTGGGGCCT ATGTGGTTAC CCCCGAAAGC CGCGCATCTT TTTGGCAGGC GTTCCGATTA ACTGGAGATG AGCAACAGGC TCTGGAGGAC CGTCTAATGA GATGGGAGAT GGACTTATGT GGAATCGAGG GCACAGACTC GTGTGAGCCT AGTGTCCTAG ATTTCGCCGC AGCATGA

Products

Productgag
MELLNKLFGT ERPIYVGDFA IGVNKPRNID MFDLVCRLAL KYIRTGRVER DVGTLTEFLV VIAKNDCAAK WDWLMRRGKG RDYIKPAIVA GIGILLPLLF AKRWYTRMAT AVVTLPLTAV ATYATLPRES LSAFKMRKEA MADMGDESDA TECLEVWKAK SIKGPDGEEV VTGSRITRVV AKVKPRRNRY AAKIAQVARS KVGYLSNTPE NRLIYQRVLI EIMDKDCVRY CDRDALLPVA IGLCFVYQEG VREASQLWGS TESLGLK
Productgag-pol
DescriptionRNA-dependent RNA polymerase
Modifications802..804,aa:OTHER
MELLNKLFGT ERPIYVGDFA IGVNKPRNID MFDLVCRLAL KYIRTGRVER DVGTLTEFLV VIAKNDCAAK WDWLMRRGKG RDYIKPAIVA GIGILLPLLF AKRWYTRMAT AVVTLPLTAV ATYATLPRES LSAFKMRKEA MADMGDESDA TECLEVWKAK SIKGPDGEEV VTGSRITRVV AKVKPRRNRY AAKIAQVARS KVGYLSNTPE NRLIYQRVLI EIMDKDCVRY CDRDALLPVA IGLCFVYQEG VREASQLWGS TESLGLKQGG LVRLPGTVTR INNDIPSGVL QSQEVFQVRI GPPVSKERSI YMVSGCPSQA RFLVHNHCLA NLKRGLVERV FCVEKNGKLV RTPQPAKGAF ASLSPFRKAV VEEVGTAHRL GYDGFLSYYS GAKLRTYSNA VESLHIQSVN ERDSHLTTFV KAEKISTSKG DPAPRVIQPR SPRYNVELGR YLRHLESKLM KAVDTVYGET TCIKGYTADE VGMIFKNKWD RFHKPVAIGL DASRFDQHCS VEALQFEHGF YKALYPNNKL LDKLLSWQLV NKGKGYVPDG GISYVKEGCR MSGDINTSLG NYLLMCSMVY GFMRFVGINE YSLANCGDDC VLIVESRNLD QVQSKLPEYF FRLGFTMKVE KPVYYLEEIE FCQAHPVQFQ GGWKMVRNVR TAMSKDVHCV NNIRDIPTRK AWSNAQHVGG MALSSGIPVV ETFYSRFRTY DVVKHQRIDT VTNQHKWRGA GGAYVVTPES RASFWQAFRL TGDEQQALED RLMRWEMDLC GIEGTDSCEP SVLDFAAA

Publication