Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200010"

Accession numberr200010 [export]
Locus namehdc
Recode1 namehdc_r_euk_dmel
Descriptionheadcase protein
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismDrosophila melanogaster [details]

Sequence

GenBank IDsZ50097.1
SequencemRNA of 4650 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 2,981)
Descriptionproduction of fusion protein and set the ratio between two protein products
GAATTCCCCC CCCAGTTTGA ATTTCGCTTT CGATCTGGTT GGTTGTGTTT TTTGGCTTCT CTCTGCGTGC GCCGCTCGTG GTGGGAAAAA ACGGAAAACA GGAGAACTAG CAAAACCGAA TAAATCGAAG AGGAACACTC CAGTTTACAA TTGTCCTGCG ACTAAAAACC AATCGGAAAT TTACACTATC CTCTAATCCT TTTTGTTTGC CGGTAAAAAA AAATAAGAGG CGCAATAAAA TAAACGCAGA AAGCGAAGCA AAATGTGAAA AATTGCCGAA CATGGCGCCG CGTGTGTGAA AGAGAGCGAA CGATCGTGTG AGAGGGAGAT AGGGACGAAG CGAAGATAAA CAAGATAAAT AATAAAAAAA AAAACAATTT TTGATACTTA AAGTTCTACA ACAACAATAA ACTCAGCTCA GGTACAACAA CAAAACAGAA AATTACGCAA AACACAACAA ACTGCATTGA CGGGAATTTT TCGAAGTATT TTTGATACAC ACAGCAAGGA GGTGTACGAT TTTTAAAGCA ATAAGTGAAA GCAATTACCC ATCAAGTTAA AAATAATACC AATCTCGGTA GAAACCCACT CGGAAAATCC ATCTGAAAAC AATTGAAAAA GGCAACCGAA AAGTTAAAAC CTAAACAGAC TAAATCGCTA AAATAACAAG CATTTACTAT ACACAAAAAA ATTTAATTCC GTATAAAATC AGACTTTTGT CTGCAAAATT TCTAAAAATT TACAAAAACC CACTAAAATT CACGAAAACT CACTGGATCT GCCAAAACCA TCAGTTGAAA TATATTCTGG AATCGGTTCA AAAATAAATA AATATATGCC AGCAGCATTT ATATAGAACG CAAATCGCAC CATAAATCGC GAAAAATCAA CAAGCAATAT TTTGAAATTC ATAATCGTTG GCAAAATGCT GATTCGAAAT AGAGATTGAG GATTCTCGAG GACAGCCAAC CCAGCCAACC AACCAAGTTT TTCGCCGCAA CGAGTGCATA TTAAGAGGAA AAAACACAAA TTTATGGCTC CGCGTCGCAA CAGCAACATC AGCAGCAGCG GCAACAGCAC CCAGCAGCAG CACCAGCAAC AGTTGCAGCA GCAGCACCAG ACGCAGCAGC ATCAACTGCT GCAGTTCTAC GCGGAGAACG TGAATTCTTC AGGCGTCCTA ATGGCGCCCA TGCAGGGAAC CGGTGGCGTT GGTGGCGTTG GCGGCGGGGG CATGGTCCAC TGCTGCCTGC CCAGCGGAGA CTGTCGCAAA CTGGACACCC TGATACCCCT GAACGAGCTC TCCCTGGCGG ACTGCATCCG TGTGCTGTGC AACAACGAGA ACTGCAGCGC GGGCCAGTAC ATGCATCGCG AGTGCTTCGA GTGGTGGGAG GCGAGCGTGC TGCAGGCACT GAAGGCCAAC GGCCGTGCTC GATCCTGGTC GGAGCGGCAG CGTCTGCAGC ACCTGTGGAC CAAGAAGGGC TACGAGCTGG TCCAGAAGGC CTGCAGCTGC AAGTGCGGCA GGGGACAATT GCGCAAGGAC CTCGACTGGG TGCCGCCGAG CAGCCAGGGC GTCATATACC TCAACGGGTC TGGCAACCGG TCCAATCTGG CCAATGGCAG CCTCAGCGAG GACGACGACA AGAAGAAGGC CAAGAAGAAG AGGAACCGCA ACAACAACAA CAACAACGGC GGCGGCGGCG GTGGTGGTGG TGGTGTCAAT GGCAACACCA AAACCCCCTT GAGCAACAAC AACGGCAACC ATGACGCCGG ACTCACGCCC AATCCCAATG TGGGCGTCAT AGGGTCGGGT TTGCCCCACA ACAACGGCAA CACCGCCAGC AATGGCAGCA GTGGCAACAA CGGCTCTCCG GCGTGCTGCA GACCAGTGCG CTGGCCACTT TCAGCAACAT CCTCAATACG AACAATGTCT TGGCCTGGAC CTGCGCGCCA GGGCTGGCAG CTATCCTCCA GTGGAGCTGG CAGTGGATCC ACCTCGCCCT CGGACTCCCA GTCCAGTGGC GAGATATCCG TGTCGCCGGT GCAGCAATTG CTCGCACAGC AGCAGCAACA ACAGCAGCAG TCGCTCGTGA TCCAGCCTCT GGGTCCAGCT TTCGGCAGCA ACCTTTTGCA AAATGGATTG GGTTTGTCCA AGAATCTGCT GATTGCTCCC CAGCAGCCGC AGCAGCAGCA GCTGCAACAA CAGCAGCAGC AGCAGAATAA TCTGCCTGCT TTGGCCAATA TCAGCAACTT CAAGCCATTG GCCAGCTACG AGCAGCAGCA ACTTGTGCAG CAGCAGAAGA ACAAGGAGGT CGAACTCTAT TCCGAGCGAG TGCGCTCCAC ATCTGGCTGC AATGGGATCT TTTCGCGTCG CCTGGACTTT TCGTCGTTCA ATTTGCTGCC AAAGACTCGT TTGAATTCTT ATCAAGTCAA GATTGAGGAC GAGGGCAACC ACGGCAACGA TGAGACGCGC CTGTTCATCC TCTCCTCGCT GGCCCAATCC CAGATGAGCC GGGTGGCCTG CATTCTGTGC GAGGAGCCGC TGCTCGTATT CGATCGCTAT CCACTGGTCG ATGGCTCCTT CTTTCTGAGT CCCAAGCAGC ATTCCAGCGG CTGCATCGAG GTTAAATACG AGGGACGCAC TCTCTACTTG ACCTGTGTTT GCATGAGCTG CCTGGACGGA ACCTCCAGCA GCCGGGCCAT CAACTGCAGA TTCTGCAAGG AGCCGTGGGA TGGCTCCAGC CTGGTTTTGG GCACCATGTA CGCCTACGAC ATCTTTGCGG CCATGCCCTG TTGCGCCGAG CGGTTCAAGT GCAATAACTG CTTCAAGATG CTAATGCATC CGCAGCAGCG TCTGAGCTTC TACAGTGACT ACTCGCACGG AGTGACCTGT CCGTATTGCA ACACGCAGGA CACGCACTTC GTTAAGCCGC TGACCTTCTG CTACGCCAAG AGCACGGCGA CGCGGCTGCC GACGCTCGCA TAACATGAGG CCCCGTTGGA GTCGCCCGTG GGAACAGGTG CCACCACCAC TCAGGTGCCA AATGCCCAGG GCTCTCCAAC GGCCTCCGGC TGCAGCAGCA ACACCATCGC CAGCAAGCAG CCACCGAAGC AGCAGCTCTA CAATGCCGCC ATCGATTACT CGGCACCGCT GCAGCAGCAA ATTAATCCGG ACTTGATTGG AGCCCATCCG CATGCCCAGC AGCATCAGCA GCAGGTGCGG CAGCAGCAAC AGCAGCAGCA GCAGCAGCAA CCACAGCAGC AACAACAACA GCAGCAGCAA CAGACACAAC AACAACAGTC ACAACAACAA CAGCAGCAGC AGCAGCAGCA ACATCAGCCT GTGGTCAGCA CTTTTCAGAG GGGCAACTTC CCTCAACAGT CCCATAAAAC CATGAACATG ATGGCCATGG CGGATGTGAT GAGCAAGTAC CAGCAGCAGC AGCACCAACA GCAGCAGCAA CAGCGCCAGC AGCAACACAA CCTGCAGCCA CAGCAGCAAC ATGCAACGCA GAAAGGACTC GAGGGCCTTC TATTGACCAA CACAAACACA AGCAACAACA ATAGCAGCAG CAGCAGCAGC AGCAGCAGTA TTAGTAACTT AATCATTAGC CATAATTCAG CCAGCAATAC AGGCAACAAA ATGCAGCCCA CTTGGGGCCA GAGTGATGCC ATCTCGGCAT TGTGGGGCTG CTCCAGCAGC AGCAGCGGCT GCTCCTCGGG CAGTGGATCG CAGCCCTCGT TGAGTCCGAC GGCCAGCAGC AATGGCAACG ATGGCTCCAA GATGATGTTG TGGGCGGCCC AAAGTTCGCC GCAAAATGCT GCAACACTCA GGGATGGATT CAAGGAGTTG CAGCGCCAGC AGCCACCGCA GCAGCAGGTG CCACAGCAAC AGCCACATGC AGCCTCGCCC ACAGCTTCGC TGACCAGTTC CAGTTCCTCC TCGAACGGAT GGAGCGCCTC GCATTATGGC AAGCCCAACA TCTGGGAGCT GCCAGGATCC ACCGGGCAAC GGACACCGGC CAGCAGCCAC GACATCTTCA CCGATCTCCT GTGCAACCTG AGCATCAGTC AGGACAACAG CAGCCAGCAG GCCAGCAGCA AGGCCGATGC CTCCGACGTC AGCTCGAATT CCTCCTCGTC GGCCGGGGAA CTCCTGGAGG CGGCCAATAT CTGGAGGTTT CCAGAGTACG CCAGTAGTCA GCTCTACATG GAGGAGCCGA CTGGTGGCGC ACGTGCCTGC ATGCAGCTCT TCAACGACTA TCTCAACATG AACTAAAACG AAGAATTGGG AGCCACAACA GCCTGCCGCA TTTGTTACTC TAGCTAAATT GAAAAACAAA AATTGAGGAA AAAGGAGTAA GCAGGCGGAG GAGAGGCCGT ATACGAGCCA CTCTCCTGAA GCGAGTGTTT TAGTTTTTTA AAATCATTTG ATTTTTTTTA TATACACACA CACAACACAC ATCTAAAACC GAGAGAAAAC AAAGCAAACT AAAAACGAAT TTCTTGTTAT TTTTGTTGAG TTTTTTAGTT CTTTGTTTAC ACACACCTAC CTAAACGAAA AAAAAAGCAA TTTTTAGTTT TATTTTATAA AGCAAATTTT TTATACATTT TACCAAAAAA AAAAAAACGA ATGCTGCGGC CGCCGAATTC

Products

Producthdc45
Descriptionunknown function
MAPRRNSNIS SSGNSTQQQH QQQLQQQHQT QQHQLLQFYA ENVNSSGVLM APMQGTGGVG GVGGGGMVHC CLPSGDCRKL DTLIPLNELS LADCIRVLCN NENCSAGQYM HRECFEWWEA SVLQALKANG RARSWSERQR LQHLWTKKGY ELVQKACSCK CGRGQLRKDL DWVPPSSQGV IYLNGSGNRS NLANGSLSED DDKKKAKKKR NRNNNNNNGG GGGGGGGVNG NTKTPLSNNN GNHDAGLTPN PNVGVIGSGL PHNNGNTASN GSSGNNGSPA CCRPVRWPLS ATSSIRTMSW PGPARQGWQL SSSGAGSGST SPSDSQSSGE ISVSPVQQLL AQQQQQQQQS LVIQPLGPAF GSNLLQNGLG LSKNLLIAPQ QPQQQQLQQQ QQQQNNLPAL ANISNFKPLA SYEQQQLVQQ QKNKEVELYS ERVRSTSGCN GIFSRRLDFS SFNLLPKTRL NSYQVKIEDE GNHGNDETRL FILSSLAQSQ MSRVACILCE EPLLVFDRYP LVDGSFFLSP KQHSSGCIEV KYEGRTLYLT CVCMSCLDGT SSSRAINCRF CKEPWDGSSL VLGTMYAYDI FAAMPCCAER FKCNNCFKML MHPQQRLSFY SDYSHGVTCP YCNTQDTHFV KPLTFCYAKS TATRLPTLA
Producthdc50
Descriptionhdc, headcase protein
Modifications2981..2983,aa:OTHER
MAPRRNSNIS SSGNSTQQQH QQQLQQQHQT QQHQLLQFYA ENVNSSGVLM APMQGTGGVG GVGGGGMVHC CLPSGDCRKL DTLIPLNELS LADCIRVLCN NENCSAGQYM HRECFEWWEA SVLQALKANG RARSWSERQR LQHLWTKKGY ELVQKACSCK CGRGQLRKDL DWVPPSSQGV IYLNGSGNRS NLANGSLSED DDKKKAKKKR NRNNNNNNGG GGGGGGGVNG NTKTPLSNNN GNHDAGLTPN PNVGVIGSGL PHNNGNTASN GSSGNNGSPA CCRPVRWPLS ATSSIRTMSW PGPARQGWQL SSSGAGSGST SPSDSQSSGE ISVSPVQQLL AQQQQQQQQS LVIQPLGPAF GSNLLQNGLG LSKNLLIAPQ QPQQQQLQQQ QQQQNNLPAL ANISNFKPLA SYEQQQLVQQ QKNKEVELYS ERVRSTSGCN GIFSRRLDFS SFNLLPKTRL NSYQVKIEDE GNHGNDETRL FILSSLAQSQ MSRVACILCE EPLLVFDRYP LVDGSFFLSP KQHSSGCIEV KYEGRTLYLT CVCMSCLDGT SSSRAINCRF CKEPWDGSSL VLGTMYAYDI FAAMPCCAER FKCNNCFKML MHPQQRLSFY SDYSHGVTCP YCNTQDTHFV KPLTFCYAKS TATRLPTLAQ HEAPLESPVG TGATTTQVPN AQGSPTASGC SSNTIASKQP PKQQLYNAAI DYSAPLQQQI NPDLIGAHPH AQQHQQQVRQ QQQQQQQQQP QQQQQQQQQQ TQQQQSQQQQ QQQQQQHQPV VSTFQRGNFP QQSHKTMNMM AMADVMSKYQ QQQHQQQQQQ RQQQHNLQPQ QQHATQKGLE GLLLTNTNTS NNNSSSSSSS SSISNLIISH NSASNTGNKM QPTWGQSDAI SALWGCSSSS SGCSSGSGSQ PSLSPTASSN GNDGSKMMLW AAQSSPQNAA TLRDGFKELQ RQQPPQQQVP QQQPHAASPT ASLTSSSSSS NGWSASHYGK PNIWELPGST GQRTPASSHD IFTDLLCNLS ISQDNSSQQA SSKADASDVS SNSSSSAGEL LEAANIWRFP EYASSQLYME EPTGGARACM QLFNDYLNM

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