Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200017"

Accession numberr200017 [export]
Locus namecoat protein readthrough
Recode1 namepol_r_vir_bydv6
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismCereal yellow dwarf virus - RPS [details]

Sequence

VariantMex
GenBank IDsAF235168.2
SequenceRNA of 1839 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 613)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAGTACGG TCGTCCTTAG ATCCAATGGC AATGGTTCGC GCAGACGCAG ACAGAGAGTC GCTCGGCGAA GGCCTGCTGT CAGAACGCAG CCAGTGGTTG TGGTCACTCC CAACGGCCCA GCCAGGCGCG GAAGACGCCG AGGACCAGCT CGTCCTCGGC GAAGAAGAAC TCCAGGACTC GGAGGAGGGG GCCGTGGCGA GACATTTGTT TTCACAAAGG ACTCACTCGC GGGCAACTCC TCTGGAAGTA TCACCTTCGG GCCGTCTTTA TCAGACTATC CGGCATTCCA GAATGGAGTA CTCAAGGCCT ACCATGAGTA TAAGATCACA GGTTGTATCT TACAGTTCGT CAGCGAGGCC TCTTCCACAG CAGCCGGTTC CATCGCTTAT GAATTGGACC CCCATTGCAA AATCTCTTCG CTCGCATCAA CCAACAATAA GTTCACAATC ACCAAAACTG GTGCGCGGAG CTTCCCAGCG AAGATGATTA ACGGGTTAGA GTGGCACCCT TCAGACGAAG ATCAATTCCG TATCCTCTAT AAAGGGAACG GTGCCTCTTC CGTAGCTGGT TCTTTTAAGA TCACACTTCG TGTACAGCTA CAAAACCCGA AATAGGTAGA CGCGGAACCC GGCCCTAGTC CAGGGCCATC ACCCGACCCC CCCCCCCCTT CCCCATCCCC AGAACCAGCT CCTGCCAAGG AGGAACGCTT CATCGTTTAC TCTGGGGTGG CTCACACGGT CATCACTGCT CAAGGCACTG ATGATTCTAT CATAGTTAAA GATATCCCCG ACCAGCGATT TAGATACGTT GAGAACGAAA ACTTCTACTG GTTTCAGATA GCTGCTCAAT GGTACTCAAA TACAAATACT AAAGCAGTTC CGATGTTTGT CTTTCCAGTT CCCATTGGAG AATGGTCAGT CGAAATATCA ACTGAGGGAT ATCAAGCCAC ATCCAGCATG ACTGACCCTA ACAAGGGCCG CATCGATGGG CTCATAGCTT ATGATAACTC AAATGAAGGG TGGAATATTG GGGCTGGAAG TAATGTCACC ATCACAAACA ATAAAGCTGA CAATAGTTGG AAGTACGGTC ATCCCGACCT GGAAATCAAC TCTTGTCACT TTAACCAAAA CCAAGTTTTG GAGAAAGATG GTCTTATTTC CTTTCACATC AAAGCCACAG AGAAAGAAGC GAACTTCTTT CTGGTGGCTC CGCCTGTCCA GAAAACTTCA AAGTACAATT ACGCCGTCTC ATATGGCGCC TGGACAGACA GAGATATGGA ATTCGGGTTG ATTTCGGTTA CGCTTGATGA GAAGCGTAGC TCGGGTTCCC CCACTCGTAA AAGCTTGCGT GCCGGACACA CGCAAGTGGC GTCCACTACC GACTTGGTGG CGTCACCGGA GAAGGACAAC TCCGGTATAC AAACATCTGA AACCCCGGCA GTTCCGGTCA CCAGCTCAAA AGCACCGATT CCAATGGTTT CGGATTCGGA GTCAGAAGAC GACCCGCTGT CAGCCGCACC CGATGTGGGA TTCGGCGGAA CTCGTCTTTT ACTGGATACT GATATCCAGA CCGTACCCAA TCCGGAAGTT GCAGAGGCCT TCTTGAACAG CGCTCATGTG GGTTACGACC CTTGGGCCGA GATCCGAGCG TTCAAGAACG CTCAGAAACC TGTTCGAGGG CCATCATCGG TCGCTAGCGG CTCCATTACT GGAGGATCGC TTCGAGGGAC ACTTCGCCCG GCTTCCGAGC CTGCGCGAGA AACCCCATAC GAGAGAGACG AAAACAAAAC GACTCGTCGT CAGAAATCAC GTTTCTCGTT TGGTGGTGGT CGCTCCTAA

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MSTVVLRSNG NGSRRRRQRV ARRRPAVRTQ PVVVVTPNGP ARRGRRRGPA RPRRRRTPGL GGGGRGETFV FTKDSLAGNS SGSITFGPSL SDYPAFQNGV LKAYHEYKIT GCILQFVSEA SSTAAGSIAY ELDPHCKISS LASTNNKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY KGNGASSVAG SFKITLRVQL QNPK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications613..615,aa:OTHER
MSTVVLRSNG NGSRRRRQRV ARRRPAVRTQ PVVVVTPNGP ARRGRRRGPA RPRRRRTPGL GGGGRGETFV FTKDSLAGNS SGSITFGPSL SDYPAFQNGV LKAYHEYKIT GCILQFVSEA SSTAAGSIAY ELDPHCKISS LASTNNKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY KGNGASSVAG SFKITLRVQL QNPKQVDAEP GPSPGPSPDP PPPSPSPEPA PAKEERFIVY SGVAHTVITA QGTDDSIIVK DIPDQRFRYV ENENFYWFQI AAQWYSNTNT KAVPMFVFPV PIGEWSVEIS TEGYQATSSM TDPNKGRIDG LIAYDNSNEG WNIGAGSNVT ITNNKADNSW KYGHPDLEIN SCHFNQNQVL EKDGLISFHI KATEKEANFF LVAPPVQKTS KYNYAVSYGA WTDRDMEFGL ISVTLDEKRS SGSPTRKSLR AGHTQVASTT DLVASPEKDN SGIQTSETPA VPVTSSKAPI PMVSDSESED DPLSAAPDVG FGGTRLLLDT DIQTVPNPEV AEAFLNSAHV GYDPWAEIRA FKNAQKPVRG PSSVASGSIT GGSLRGTLRP ASEPARETPY ERDENKTTRR QKSRFSFGGG RS

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