Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200020"

Accession numberr200020 [export]
Locus nameselN
Recode1 nameselN_s_euk_hsap
Descriptionfunction unknown
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismHomo sapiens [details]

Sequence

GenBank IDsAF166125.1,AJ306399.1,NM_020451.1
SequencemRNA of 3950 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 1028)
DescriptionSelenocysteine incorporation at UGA codon. translational start site unknown
GTACATCAGC CCTGAGGAGT TCAAACCCAT TGCTGAGAAG CTAACAGGGT CAACTCCCGC GGCCAGCTAC GAGGAGGAGG AGTTGCCCCC TGACCCTAGC GAGGAGACGC TCACCATAGA AGCCCGATTC CAGCCTCTGC TCCCGGAGAC CATGACCAAG AGCAAAGATG GCTTCCTAGG GGTCTCCCGC CTCGCCCTGT CCGGCCTCCG AAACTGGACA GCCGCCGCCT CACCAAGTGC AGTGTTTGCC ACCCGCCACT TCCAGCCCTT CCTTCCCCCG CCAGGCCAGG AGCTGGGTGA GCCCTGGTGG ATCATCCCCA GTGAGCTGAG CATGTTCACT GGCTACCTGT CCAACAACCG CTTCTATCCA CCGCCGCCCA AGAGCAAGGA GGTCATCATC CACCGGCTCC TGAGCATGTT CCACCCTCGG CCCTTTGTGA AGACCCGCTT TGCCCCTCAG GGAGCTGTGG CCTGCCTGAC TGCCATCAGC GACTTCTACT ACACTGTGAT GTTCCGGATC CATGCCGAGT TCCAGCTCAG TGAGCCGCCC GACTTCCCCT TTTGGTTCTC CCCTGCTCAG TTCACCGGCC ACATCATCCT CTCCAAAGAC GCCACCCACG TCCGCGACTT CCGGCTCTTC GTGCCCAACC ACAGGTCTCT GAATGTGGAC ATGGAGTGGC TTTACGGGGC CAGTGAAAGC AGCAACATGG AGGTGGACAT CGGCTACATA CCCCAGATGG AGCTGGAGGC CACGGGCCCC TCTGTGCCCT CCGTGATCCT GGATGAGGAT GGCAGCATGA TCGACAGCCA CCTGCCCTCA GGGGAGCCCC TGCAGTTTGT GTTTGAGGAG ATCAAGTGGC AGCAGGAGCT GAGCTGGGAG GAGGCTGCCC GGCGCCTGGA GGTGGCCATG TACCCCTTCA AGAAGGTCTC CTACTTGCCG TTCACTGAGG CCTTCGACCG AGCCAAGGCT GAGAACAAGC TGGTGCACTC AATCCTGCTG TGGGGGGCCC TGGATGACCA GTCCTGCTGA GGTTCAGGGC GGACTCTCCG GGAGACTGTC CTGGAAAGTT CGCCCATCCT CACCCTGCTC AACGAGAGCT TCATCAGCAC CTGGTCCCTG GTGAAGGAGC TGGAGGAACT GCAGAACAAA CAGGAGAACT CGTCCCACCA GAAGCTGGCT GGCCTGCACC TGGAGAAGTA CAGCTTCCCC GTGGAGATGA TGATCTGCCT GCCCAATGGC ACCGTGGTCC ATCACATCAA TGCCAACTAC TTCTTGGACA TCACCTCCGT GAAGCCCGAG GAAATCGAGA GCAATCTCTT CAGCTTCTCA TCCACCTTTG AAGACCCGTC CACGGCCACC TACATGCAGT TCCTGAAGGA GGGACTCCGG CGTGGCCTGC CCCTCCTCCA GCCCTAGAGT GCCTGGACGG GATCTGATGC ACAGGCCCCC ACGCCTCAGA GCCAGAGTGG TCCTCAGCCC ATTTCAGACT GCAGATGCCG CCCACTCCCA CCCCACTCCT AGGCTGCCTT GGAGGGTACA AGATCCACTG AGGGTGGCCA CCACAGCCTT GGCTCCATGG TGGCGGGTAG ACAAGGGATG CCTGGGCTGA CTGGGCAGAG GAACCTCTAG CTCTGACTGT CACTCGGCTC TCCCTACCCA TTTGGCTCTG GAAGCTGCTT GGCCCCCCCA GATCAGGGCC TGGGTGAACT CCCTGGACCT TTCCTAGCCA GCCGCACAGT CTAGGCCCTT GTGGGGTGAA GAATGGAGGG AGGAGCAGGC TAGGAAGACG GGGCCACCAC CCTCTCCTTG CTTTCAGCCC TTCCCACAGG AAACATCAAG AAGCCCCAGC CAGGAGGGGC CAGGCTGCCA AGGCGGCTCC CCTGTTTATC TAGAGCCTTC GTTCCTGGCC ATACCCCGGA CTGCCCTCCT GTGCCTGATG TCCCCAGCTG GGGTCAGTCT CAACAGGAGC CAGTCTTCTG GAGCCTCTGG GCAGAACCCT CCATCAGAGT GGAAATCAGA CGGGACCCCC TGCAGCTTCC CTGACCACGC CACTGACCAG CTATCTGGGG AAGTTTACTG TGAAGGGGTT TCTGCCTTTA GCAATGGGGT TCACTAAGGG GGTTCCCGAG GCCCAGGGCC AAGGCACTCC CACCGCCTAC CTTAGCACAG GGTCTCTGCA GGACTGCGGG AGCCAGCGCT CCTGCCGCCC CTCTTGCCCC TCAGACCTTG CATCCACAGA AGCACAACCC AGCCAAACAC CACAGCCTTC TCCAGAGCCG GCACTGTCCC GGCAACCAGG GGTGCCCCAG GCTAGCTCTT CTACCTCTGG GGCACCACGG ACTCCCCTTG GCCACTCTTG GGACTTTGGT CCACGTCCTG AGCCACTGAC CACGGCCAGT CTCTCTTTTT ATATGTGCAG AAAAGTGTTT TTACACAAAC TTTCTCATGG TTTGTAGGTA TTTTTTTATA ACCCCAGTGC TGAGGAGAAA GGAGGGGCAG TGGCTTCCCC GGCAGCAGCC CCATGATGGC TGAATCCGAA ATCCTCGATG GGTCCAGCTT GATGTCTTTG CAGCTGCACC TATGGGAAGA AGTAGTCCTC TCTTCCTTCT CCTCTTCAGC TTTTTAAAAA CAGTCCTCAG AGGATCCATG ATCCCCAGCA CTGTCCCATC CTCCACAAAG GCCCACAGGC ATGCCTGTAC TCTCTTTCAT TAAGGTCTTG AAGTCAGGCT GCCCCCTCCC CAGCCCCCAG TTCTCTCCCC ACCCCCTCAC CCCACCCGGG GCTCACTCAG CCTGGCAGAG GAAGAAGGAA GGCAGACATC TCCGCAGCCA CTCCTGGGCC TTTTATGTGC CGAGTTACCC CACTTGCCTT GGGCGTGTCC ACTGAGCCTT CCCCAGCCAG TCTTGTTCTC AATTTTGTTT TGTTTTGTTT TGTTTTGAGA CGGAGTCTTG CTCTGTCACC CAGGCTGGAG TGCTATGGCT CGATCTTGGC TCACTGCAAC CTCCACCTCC CAGGTTCAAG CAATTCTCTT GCCCCAGCCT CCCGAGTAGC TGGGATTACA GGTGCATGCC ACCATGGCTG GCTAATTTTT GTATTTTTAG TAGAGATGGG GTTTCACCAT ATTGGTCAGG CTGATCTGGA ACTCCTGACC TCAGGTGATC CACCTGCCTC AGCCTCCCAA AGTGCTGGGA TTACAGGCGT GAGCAATCGT GCCCAGCCTT GTTCTTAATT TTGTATCATC CAGTCATCGC TAATATTACA CGCACCTTCT CACTTAATCC TCACGACAAG CCTGTGAGGC AGATGCTCAT TGTTCCCATC TTGATGAAAC TTGAGTCTCA GGGAAGTGAA GTGACTTGCC CAGGGTCACT CAGGTAGAGT TGAGATTCAA ACCCACATGT GGCTCCAAAG TCTGCATCTG GATTTGGGGG TGTTTTTTGG CATGGCACCC TCACCTCTCT CCCTGCCTGT TTTCCCCAAA GTGGAAAGGA AGGCCTTTCA AACCAGAGTG TCTCACTCCC CTCTGACCTC CAGACCAGAT GGGGCATGAG CCAGCCAGCT CAGCCAGGCT CCCTGTGTCC TGGGAGGAAG TGTCCCCATC CCCCATGCCC CTTATGGGGA GGGAGGGCGT CTGATGCTCT CTCTCTGCCT CCCCCCCATC CTGTCAGGCA CAGGTGACGG GGGCAGCCCA TGCGAGCCCT TCTCCTGCTG CTCTGGGAGG GCCAGTTCCA CATTGAGCCA GCCTGGTCCC ATGGAAAATG ATGGCCTGGG CTTTCTGAGG CCTTATCTGA TGCCTCTGCA GTTCATGTCC CCCACCAGGC CTCGAGGCTC AGGGTGGGAG AGGGCCCCGG GCTGCCCTGT CACTCCTCTA ACACTTCCCT CCCCTATCCC CAACATGCCC TGTAATAAAA TTAGAGAAGA CTAAAAAAAA AAAAAAAAAA AAAAAAAAAA

Product

ProductselN
Descriptionselenoprotein N; function unknown
Modifications1028..1030,aa:Sec
YISPEEFKPI AEKLTGSTPA ASYEEEELPP DPSEETLTIE ARFQPLLPET MTKSKDGFLG VSRLALSGLR NWTAAASPSA VFATRHFQPF LPPPGQELGE PWWIIPSELS MFTGYLSNNR FYPPPPKSKE VIIHRLLSMF HPRPFVKTRF APQGAVACLT AISDFYYTVM FRIHAEFQLS EPPDFPFWFS PAQFTGHIIL SKDATHVRDF RLFVPNHRSL NVDMEWLYGA SESSNMEVDI GYIPQMELEA TGPSVPSVIL DEDGSMIDSH LPSGEPLQFV FEEIKWQQEL SWEEAARRLE VAMYPFKKVS YLPFTEAFDR AKAENKLVHS ILLWGALDDQ SCUGSGRTLR ETVLESSPIL TLLNESFIST WSLVKELEEL QNKQENSSHQ KLAGLHLEKY SFPVEMMICL PNGTVVHHIN ANYFLDITSV KPEEIESNLF SFSSTFEDPS TATYMQFLKE GLRRGLPLLQ P

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