Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200026"

Accession numberr200026 [export]
Locus namefdhA-I
Recode1 namefdhA1_s_pro_eaci
Descriptionformate dehydrogenase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEubacterium acidaminophilum [details]

Sequence

GenBank IDsAJ312124.1
SequenceDNA of 2682 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 1048)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGTGTTAG TCAAGATAGA CGGCCGCGAG CTCGAGGTGC CCAAGGACTA TACTATACTC AAGGCGTGCG AGGCGGCGGG AGCGAAAATA CCCACTTTCT GCTACGACGA GAGGCTTTCA AGGCACGGAG CCGGGGCATG CAGGATATGT CTTGTAGAGA TTGAAGGGCA AAGAAACCTC ATGCCATCAT GTACTGAGAA GGTATGGGAA GGAATCTCTG TATTTACAAA GAGCGAGAGG GTCATAAAGG AGAGGAAGGG CATACTCGAG CTGATGGTTC AAAACCATCC GCTGGACTGC CTTACATGCG AAAAATCGGG AGACTGCAAG CTGCAGGACT ACTGCTATGA GTATGGTGTG ACAGGTATAA AAGGGCTCGA AGAGAGAGTT CTGCCTGTAG ACGAGAGCAA TCCGTTCTAC ACGTTCGATC CCGACAAGTG CATACTATGC GGCAAGTGCG TAAGGGTGTG CGAAGAGCTG CAGGGCACAA GAGCCATACT AATATCTGAA AGAGGTCCTG TTGCCAAGGT TTCGACTCAG TTCGAGGAGG GCCTTGAAAA TTCGCCGTGT GTATCATGCG GAAACTGCGT TTCCTACTGC CCTGTGGGAG CCTTGCTGCC AAAGAGCAAG ACTGAACACA GGGTATGGGA AACGAAAAAG GTCAGGACAA CATGTTCATA TTGCGGCGTA GGCTGCCAGC TTGAGCTTAT AGTTAAGGGA GACGAGGTTG TGGGTGTGCA GCCTGCAATG GGAGCTGGGA ATGACGGACT GCTTTGCGTT AAGGGCAAGT TTGCCTATAA CTTTGTAAAT CACCCTGACA GGCTCAAAAA ACCGCTGATC AGAAAGGACG GAGTCCTTGT GGAGGCGACC TGGGAAGAGG CTCTTTCGCT AGTGGCTAAA AAGATCAGCG ATATAAAAAG TCAGCACGGG GCCGATTCAA TTGCGGGTCT TACCTCTGCA AGATGCACAA ACGAGGAGAA CTATCTTTTT CAGAAGCTCC TGCGGGCTGT TGTGGGGACA AACAACGTGG ACCACTGCGC AAGGCTCTGA CATGCTTCCA CTGTTGCAGG TCTTGCAACA ACACTTGGAA GCGGTGCTAT GACTAACAGC ATAGCTGAGA CGAGATACAA CGATGTGATA TTCGTTACAG GCTCAAACAC AACAGAAAAC CATCCTGTAA TAGCTGCGCA AATGAAGCAG GCAGTCAAGA ATGGAGCCAA GCTGATAGTG GCTGATCCAA GGAGAATTGA GCTGGCCGAC TATGCGGACG TCTTCCTGCA GATAACGCCT GGCACAAACA TAGCGCTTTT GAATGCCATG ATGAACGTAA TAATAAGCGA AGGTCTTCAG GATAAGAAGT ATATAGAAGA CAAGACGGAA AACTACGAAG AGCTTGTTGG GCTTGCAAAA AGGTACACTC CGGAAGAGGC TGCCAGAATA TGCGGAGTTG ACGCGGAGGA CATTAGAAAA GCAGCAAGAA TATATGCAAG TGCAGACAAA GCAGGAATAT ACTATGCCAT GGGAATAACG CAGCATATAA GCGGTACGGA TAATGTAATG TCGATATCCA ACCTGGCGCT GCTTTGCGGC AACATAGGCA AGGAGGCGGC GGGAGTCAAC CCTTTGAGAG GCCAAAACAA CGTTCAGGGC GCCTGCGACA TGGGAGGACT TCCGGGAGAC CTTCCGGGGT ACCAGAAGGT TATAAGTCCT GAGGTCATAG AGAAGTTTGA AGCGGTATGG AGCGCGAAGC TTTCCAGCAA GGTGGGACTT ACTGTGCCGG AGATGCTGAC TGAAGCCTCA AACGGCAACA TAAGGATGAT TTATATAATG GGAGAAAACC CAATGGTTTC AGACCCTGAC ATAACCCATG TAAAACATGC GCTGGAACAT CTGGATTTCC TCGTGGTGCA GGATATTTTC CTGACCGAGA CTGCTGAGCT GGCAGACGTA GTGCTTCCGG CGGCGTCGTT TGCCGAAAAG GACGGCACTT TCTCGAACAC TGAAAGAAGG GTTCAGAGGG TGAGGAAAGC CGTGAATCCG GTTGGTGATT CAAAGCCGGA TTACGAGATA TTGATTAACT TAATGAAAAA GCTGGGTTAC AATGCTTTTT ACAAGGATGC GTCTGAAATA TTCGATGAAA TAGCAAGCGT AACTCCGCAA TATGCGGGCA TAGACTATAA AAGGCTAGAG GACATAAACG GACTCCAGTG GCCATGCCCC ACAAAAGAGC ATCCGGGAAC AAAATACCTT CACTCCAAGG GATGCGCCAG AGGCAAGGGT CTGTTCGTGC CTTGCGAGTA TGCTCAAAGC GCGGAGATGC CGGACAGTAC ATATCCGCTT GTGCTTACAA CAGGCAGGAT ACTCTACCAG TATCACACTA CTACAATGAC CGGAAAGACT GAGGGTATAA GCAGTAACTA TTCCGAATCG TTTATAGAGG TCAATCCTTC TACCGCAAAC AAGCTCGGAA TAGAAGACGG GGAGATGGTA AGGGTGGTGT CAAGAAGGGG CAGCGTTGAG ACGAACGTGA GAGTCACAGA GATAGTTGAG GAAGATGTAG TATTCATGCC TTTCCACTTT GCAAAGGGCG CGGCCAACAT GATAACAAAC TCAAAGCTCG ATCCTAAGGC GAAGATTCCC GAGCTAAAGG TTTGCGCAGT GAGGATAGAA CGTATAAAAT AA

Product

ProductfdhA1
Descriptioncatalytic subunit of formate dehydrogenase
Modifications1048..1050,aa:Sec
MVLVKIDGRE LEVPKDYTIL KACEAAGAKI PTFCYDERLS RHGAGACRIC LVEIEGQRNL MPSCTEKVWE GISVFTKSER VIKERKGILE LMVQNHPLDC LTCEKSGDCK LQDYCYEYGV TGIKGLEERV LPVDESNPFY TFDPDKCILC GKCVRVCEEL QGTRAILISE RGPVAKVSTQ FEEGLENSPC VSCGNCVSYC PVGALLPKSK TEHRVWETKK VRTTCSYCGV GCQLELIVKG DEVVGVQPAM GAGNDGLLCV KGKFAYNFVN HPDRLKKPLI RKDGVLVEAT WEEALSLVAK KISDIKSQHG ADSIAGLTSA RCTNEENYLF QKLLRAVVGT NNVDHCARLU HASTVAGLAT TLGSGAMTNS IAETRYNDVI FVTGSNTTEN HPVIAAQMKQ AVKNGAKLIV ADPRRIELAD YADVFLQITP GTNIALLNAM MNVIISEGLQ DKKYIEDKTE NYEELVGLAK RYTPEEAARI CGVDAEDIRK AARIYASADK AGIYYAMGIT QHISGTDNVM SISNLALLCG NIGKEAAGVN PLRGQNNVQG ACDMGGLPGD LPGYQKVISP EVIEKFEAVW SAKLSSKVGL TVPEMLTEAS NGNIRMIYIM GENPMVSDPD ITHVKHALEH LDFLVVQDIF LTETAELADV VLPAASFAEK DGTFSNTERR VQRVRKAVNP VGDSKPDYEI LINLMKKLGY NAFYKDASEI FDEIASVTPQ YAGIDYKRLE DINGLQWPCP TKEHPGTKYL HSKGCARGKG LFVPCEYAQS AEMPDSTYPL VLTTGRILYQ YHTTTMTGKT EGISSNYSES FIEVNPSTAN KLGIEDGEMV RVVSRRGSVE TNVRVTEIVE EDVVFMPFHF AKGAANMITN SKLDPKAKIP ELKVCAVRIE RIK

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