Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200036"

Accession numberr200036 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_bydv3
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

GenBank IDsAF235167.1
SequenceRNA of 1953 nucleotides [sequence]
OrganisationSequence (2)

Recoding event

Event typeReadthrough (position: 601)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCAG TAGGCCGTAG AGGACCTAGA CGCGCAAATC AAAATGGCAC AAGAAGGAAA CGCCGTAGAA CAGTTCGGCC AGTGGTTGTG GTCCAACCCA ATCGAGCAGG ACCCAGACGA CGAAATGGTC GACGCAAGGG AAGAGGAGGG GCAAATCCTG TATTTAGACC AACAGGCGGG ACTGAGGTAT TCGTGTTCTC AGTCGATAAC CTTAAAGCCA ACTCTTCCGG GGCAATCAAA TTCGGCCCCA GTCTATCGCA ATGCCCAGCG CTTTCAGACG GAATACTTAA GTCCTACCAC CGTTACAAGA TCACAAGTAT CCGTGTTGAG TTTAAGTCAC ACGCGTCCGC AACTACGGCC GGCGCTATCT TTGTTGAACT CGACACCGCG TGCAAACAAT CAGCCCTGGC TAGCTACATT AATTCCTTCA CAATCAGCAG GACCGCCTCA AAGGTCTTCA GAGCCGAAGC GATTAACGGC AAGGAATTCC AGGAATCAAC GATAGACCAG TTTTGGATGC TCTACAAGGC CAATGGAACT ACCACTGACA CGGCAGGACA ATTCATTATC ACGATGAGTG TCAGTTTGAT GACGGCCAAA TAGGTAGACT CCTCAACACC GGAACCGAAA CCTGCACCAG AACCAACACC AACCCCACAG CCAGAGCCAG CCCCACAGCC CGCACCCGAA CCGACTCCTG CACCTGTCCC CAAAAGATTC TTTGAGTATA TCGGCACTCC AACCGGTACA ATCTCAACAA GAGAGAACTC TGACAGTATT TCTGTTAGCA AGCTCGGTGG GCAGTCAATG CAGTACATTG AGAATGAGAA ATGTGAAACA AAGGTCATTG ACTCCTTCTG GAGCACTAAC AACAACGTGT CTGCACAGGC AGCCTTCGTT TACCCAGTGC CAGAAGGATC ATACAGTGTG AACATTTCGT GCGAAGGCTT TCAATCCGTT GACCACATAG GAGGCAACGA GGATGGCTAT TGGATTGGTT TAATTGCCTA CTCCAATTCG ACAGGAGACA ATTGGGGGGT AGGCAACTAC AAAGGATGCA GTTTCAAGAA CTTCTTGGCA ACTAATACTT GGAGACCAGG CCATAAGGAT CTCAAGTTGA ACGATTGCCA GTTCACAGAT GGACAAATAG TTGAAAGGGA TGCCGTGATG TCTTTCCATG TGGAAGCAAC AGGTACTGAC GCCTGTTTTT ATCTCATGGC TCCCAAAACA ATGAAAACTG ACAAATACAA CTATGTTGTC TCATATGGAG GGTACACAAA CAAGCGAATG GAATTTGGTA CCATATCTGT GACATGTGAT GAATCCGATG TTGAGGCAGA ACGCATAACA AGGCACGCTG AAACACCCAT ACGTTCCAAA CACATTCTTG TGTCCGAACA GTATGAGCAA CCTCTACCCA CCATAATCGA TCAAGGCTTG TGTGACGTGC AAACTCCCGA GCAAGAACAA ACACTGGTGG ATGAAGAAGA CAAACAGACT GTTTCCACAG AACCTGATAT AGCACTCATG GAATATGAAG CTGCAACAGC CGAAATTCCG GATGCTGAAG AGGATGTCTT GCCCTCCAAG GAACAGCTGT CTTCTAAACC GGTGGACACG TCCGGCTACA AGATACCTAA GCCCAAGGAA CCTGAAGTAC TTGGAACATA CCAGGGACAG AATATTTACC CTGAAGACGT GCCACCAATT GCGCGGCAAA AACTACGTGA AGCCGCAAAT GCACCCTCCA CATTGCTCTA CGAGAGGGCT CCCAAGAAGA GCCATAATTT CTTGACTCGT TTTGTGGAGG CGAATAGGTC CCCTACCACT CCAGCTGCCC CAACAGTGTC AACTGTATCA AACATGACAA GGGAACAGCT TGCGGAGTAC ACTAGAATTA GGAAATCCCT TGGACTCACA GCAGCGAAGG AATACAAGGC GCAATTTCAG TGA

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNSVGRRGPR RANQNGTRRK RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANPVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASATTA GAIFVELDTA CKQSALASYI NSFTISRTAS KVFRAEAING KEFQESTIDQ FWMLYKANGT TTDTAGQFII TMSVSLMTAK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications601..603,aa:OTHER
MNSVGRRGPR RANQNGTRRK RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANPVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASATTA GAIFVELDTA CKQSALASYI NSFTISRTAS KVFRAEAING KEFQESTIDQ FWMLYKANGT TTDTAGQFII TMSVSLMTAK QVDSSTPEPK PAPEPTPTPQ PEPAPQPAPE PTPAPVPKRF FEYIGTPTGT ISTRENSDSI SVSKLGGQSM QYIENEKCET KVIDSFWSTN NNVSAQAAFV YPVPEGSYSV NISCEGFQSV DHIGGNEDGY WIGLIAYSNS TGDNWGVGNY KGCSFKNFLA TNTWRPGHKD LKLNDCQFTD GQIVERDAVM SFHVEATGTD ACFYLMAPKT MKTDKYNYVV SYGGYTNKRM EFGTISVTCD ESDVEAERIT RHAETPIRSK HILVSEQYEQ PLPTIIDQGL CDVQTPEQEQ TLVDEEDKQT VSTEPDIALM EYEAATAEIP DAEEDVLPSK EQLSSKPVDT SGYKIPKPKE PEVLGTYQGQ NIYPEDVPPI ARQKLREAAN APSTLLYERA PKKSHNFLTR FVEANRSPTT PAAPTVSTVS NMTREQLAEY TRIRKSLGLT AAKEYKAQFQ

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