Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200037"

Accession numberr200037 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_bydvsgv1
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

VariantSGV
GenBank IDsU06866.1
SequenceRNA of 1929 nucleotides [sequence]
OrganisationSequence (2)

Recoding event

Event typeReadthrough (position: 589)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCTC AAGGCCCTAG GCGCAACACA CGAAGAAATG TCAGAAGGCG CACTCGATCA GTTCGGCCAG TGGTTGTGGT CCAAGCCCCC GGAACCGGAC GAAGACGAAG AAATGGACGT CGTCCAGCAA GAAGACGGGC AAATAATTTA TCAAGACCAA CAGGCAGGAC TGAGGTATTC ACTTTTTCAG TCAACGACAT CAAAGGCAAC TCCAGCGGGG TCATCAAATT CGGCCCCAGC CTTTCGCAAT GTCCTGCACT TTCAGACGGA ATACTTAAGT CCTACCACGA TTACGCGATC ACAAATGTCC AAGTATTCTA TAGATCGCAC GCCAGCTCCG AAACTGAGGG CGCACTCTTT ATTGAACTCG ACAACTCGTG CACACAATCA GCCCTGGGTA GCTACATTAA CTCATTCACC ATCACAAGCT CCGGATCGAA AACCTTCACG GCGGGCTCTA TTAACGGGAC CACGATGAAG AACTATTTAT CTGACCAATT CTACCTCCTA TACAAAGGCA ACAGTTCTAA GGCCACTGTT GCAGGTCAGT TCATTATCAC GATCCGTGTG AAAATGGCCA ACCCCAAATA GGTAGACCCC TCGCCGTCCC CCGCTCCTAC TCCAACACCA ACCCCGACAC CCCAACCTCA ACCATCTCCC CAACCGCAGC CAGAACCTAC AAAACCCAGA TTCTACGCGA ATTACTCTGG AACTCCAATT GTCAACATTA GTACCAGAGA AACCACTGAT AGTATATCTG TCAAGAAGCT GGGTTTGCAA ACTCTCATGT ACAACTCCGA CGAAGTCCAT GAAAACCGCC AGATCCGTTC GTGGTGGTAT TCAGATAACA ACGTTGAGTC ACAGGCTGCG TTTGTCTTCC CTGTTCCAGA AGGGGAGTTT TCTGTGCAAG TCACTGCCGA AGGATTACAA TCAGTAGACC ATATTGGTGG CAATTACGAT GGCTACTGGA TTGGGCTTAT TGCATACGGC AATGACACAT CTGATAACTG GGGAATTGGA ATCTATAACC GGTGCTCAAT TACTGATCTA ATCAATACCG CTTCTTGGCG GCCTGGGCAC AAAGATATGG AACTCAATGG GTGCAAATTC TCGGACCAAG TTGTAGAACG TGACGCAATT ATGTCATTTA AAATCCATGC TCAAAAGGAC GCGTCTTTCT ACTTGGTTGC GCCAAAAACA AAGAAATCAG ACAAGTACAA CTATGTTGTA TCTTATGGCG GCTACACCGA GAAACGAATG GAGTTTGGAA CCATCTCTGT GACCATAGAT GAAAGGAACG ACGAGGCAAG ATCACAATGG CACACACAGC AACTCTTCAG GCCAGGTCAG TCTGAAATAC TACATGAACG TGCCAATCCT TTATCTACCT TCGTGCCAGT ACCGGACACT AATTTTGAAA GAAATGAGGA CACCAATCCT CCTGTTAGTG TCTCATCCCC AGAACCTGAG GTTAACCTCA ACCTGGAGGA TATTTCGCAC GAGCTGACTG AAAAGGGTAG GGAACCTACA CCCGACCCGC AGGACGACTT AGCCAGAAGG CTGGAAGAGT ATGAAAGAGC AGCCAGTGAG GTGCCTGATT TTGCATTGAC CCAGGATGGC GAGGAGACTC CTTCGATCTC CTTGGCGCCA CCAAAACCCC CTGGTTTGCC AAAATCACCA GAACCAGCCC AAACCTACCG GCCCGATCCT GTTACAATTC CCAACTACAC CAAAAGCAAA GCTAACAGCC GATTACTCTC CCGATTCTTG GAGGGAAACC GTTCCAATAA AATCGCTGAC GGATCTACCG CTACCACCTC AAGACTGACT TCAGAACAAA ATCTGGAGTA TTACCGTATA AGACGGTCAC AAGGTAAAAC CGCAGCTGAT AAGTACAAAA CTGAGTGTTT GAATGAACAA GCAATCTAG

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNSQGPRRNT RRNVRRRTRS VRPVVVVQAP GTGRRRRNGR RPARRRANNL SRPTGRTEVF TFSVNDIKGN SSGVIKFGPS LSQCPALSDG ILKSYHDYAI TNVQVFYRSH ASSETEGALF IELDNSCTQS ALGSYINSFT ITSSGSKTFT AGSINGTTMK NYLSDQFYLL YKGNSSKATV AGQFIITIRV KMANPK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications589..591,aa:OTHER
MNSQGPRRNT RRNVRRRTRS VRPVVVVQAP GTGRRRRNGR RPARRRANNL SRPTGRTEVF TFSVNDIKGN SSGVIKFGPS LSQCPALSDG ILKSYHDYAI TNVQVFYRSH ASSETEGALF IELDNSCTQS ALGSYINSFT ITSSGSKTFT AGSINGTTMK NYLSDQFYLL YKGNSSKATV AGQFIITIRV KMANPKQVDP SPSPAPTPTP TPTPQPQPSP QPQPEPTKPR FYANYSGTPI VNISTRETTD SISVKKLGLQ TLMYNSDEVH ENRQIRSWWY SDNNVESQAA FVFPVPEGEF SVQVTAEGLQ SVDHIGGNYD GYWIGLIAYG NDTSDNWGIG IYNRCSITDL INTASWRPGH KDMELNGCKF SDQVVERDAI MSFKIHAQKD ASFYLVAPKT KKSDKYNYVV SYGGYTEKRM EFGTISVTID ERNDEARSQW HTQQLFRPGQ SEILHERANP LSTFVPVPDT NFERNEDTNP PVSVSSPEPE VNLNLEDISH ELTEKGREPT PDPQDDLARR LEEYERAASE VPDFALTQDG EETPSISLAP PKPPGLPKSP EPAQTYRPDP VTIPNYTKSK ANSRLLSRFL EGNRSNKIAD GSTATTSRLT SEQNLEYYRI RRSQGKTAAD KYKTECLNEQ AI

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