Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200043"

Accession numberr200043 [export]
Locus nameselT
Recode1 nameselT_s_euk_mmus
Descriptionfunction unknown
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsBC019970.1,BC038867.1,XM_283848.3,AK047958.1,AK032838.1,AK013022.1
SequencemRNA of 972 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 172)
Descriptionselenocysteine incorporation.
GCGGCCGGAG CGGCTGTCTC AATTACGATG AGGCTCCTGC TGCTTCTGCT GGTGGCGGCG TCGGCGGTGG TCCGCAGCGA GGCCTCTGCC AACCTGGGCG GCGTGCCCAG CAAGAGATTA AAGATGCAGT ACGCCACCGG GCCGCTGCTC AAGTTCCAGA TTTGTGTATC CTGAGGGTAC CGGCGGGTGT TTGAGGAGTA CATGCGGGTT ATCAGCCAGC GGTATCCAGA CATCCGCATT GAAGGCGAGA ATTATCTCCC TCAACCAATT TATAGACACA TAGCATCTTT CCTGTCAGTC TTCAAACTAG TATTAATAGG CTTAATAATT GTTGGCAAAG ATCCTTTTGC TTTTTTCGGC ATGCAAGCTC CTAGCATCTG GCAGTGGGGC CAAGAAAATA AGGTTTATGC ATGTATGATG GTTTTCTTCC TGAGCAACAT GATTGAGAAC CAGTGTATGT CAACAGGTGC ATTTGAGATA ACTTTAAATG ATGTGCCAGT GTGGTCTAAG CTGGAATCTG GACATCTTCC ATCCATGCAA CAACTTGTTC AAATTCTTGA CAATGAAATG AAACTCAATG TGCATATGGA TTCAATCCCA CATCATCGAT CATAGCCCTA CCTATCAGCA CCGAAAACTC TTTTACACTA AGGGATTTTG CAAGAGCAGC GTGACTGACA TTATGAAGGC CTGTACTGAA GACAGCAAGC TGTTAGTACA GACCAGATGT TTCTTGGCAG GCTCGTTGTA CCTCTTGGAA AACCTCAGTG CAAGACAGTT TTCCATGCTG GCCCATGCTG AATTCTGCAC ATACATGTAG TGCAGTGATC CTGTGTAGCT TCCCCAGCCC ACTGGTCATA GTTTCTTCTT GACACAGCAT TACTACTTGT AATTCTTTTC TTGGTCATGT GTGAGAAAGC ACAGCATTGA GTTATAACTT GAGTTTTTTT CAACATGAAA AAAAAAAAAA AA

Product

ProductselT
DescriptionSelenoprotein T; function unknown
Modifications172..174,aa:Sec
MQYATGPLLK FQICVSUGYR RVFEEYMRVI SQRYPDIRIE GENYLPQPIY RHIASFLSVF KLVLIGLIIV GKDPFAFFGM QAPSIWQWGQ ENKVYACMMV FFLSNMIENQ CMSTGAFEIT LNDVPVWSKL ESGHLPSMQQ LVQILDNEMK LNVHMDSIPH HRS

Publication