Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200045"

Accession numberr200045 [export]
Locus namecoat protein
Recode1 namepol_r_vir_bnyvv
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismBeet necrotic yellow vein virus [details]
AcronymBYNVV

Sequence

GenBank IDsX04197.1
SequenceRNA of 2220 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 709)
Descriptionproduction of fusion protein and set the ratio between two protein products
AAATTCTAAC TATTATCTCC ATTGAATAGA ATTTCACCGT CTGTCGGTTC TTATTTTGTT CTGGGGGCAA TTTTATTCAG GGCCCTACTT TAAATATAGG TGCGAGTAAT AAGTAGCCGC CGTCCAGAAG AAGATAGTAC CAACATGTCG AGTGAAGGTA GATATATGAC ATGGAAGGAT ATGTCACATA ATAAGTTTAT GACCGATCGA TGGGCTCGTG TTTCGGACGT CGTGAGTGTT ATTAAACAAT CGCATGCTAT GGACTTGTCC AAGGCTGCGA ATCTATCTAT AATTAAAACT GCTTTGGCAG GATTAGGCTC GGGTTGGTCT GACAGTAATC CTTTTGTGTC TCCGATGACC CGTTTTCCAC AGACACTAAC TATGTATGGT GCACTTGTGT TATATGTTAA TCTGTCTGAC CCAGAATTTG CGTTGATAAT GACTAAGGTA AATACTTTAA CTGATTCAGG GTTAGCAGAT AATGCATCTG CTAATGTACG TAGAGATGTG GTGTCTGGAA ATAAAGCTGA ATCATCCGGT AAAACTGCTG GTACTAATGA GAACTCTGCT TATACGCTTA CTGTCAGTCT TGCTGGTTTA GCTCAAGCTC TTAGGCTTGA AGAATTAATG TGGACCCGGG ATAAATTTGA GGACCGGTTC AAATTACCAT GGACACCTGT TCAAGGTAGA ACCAGTCCAC CCGGACAATA GCAATTAGCT GCTGCTCGGG TGACGGCACA CATTCGAGCG GCGAAGCGGG CACTATTATA TCCTGGTGAT AGTCCCGAGT GGGTTGGTTG GAAACATTTC TATCCTCCTC CACCATATGA CGTGTATGAT GTGCCACCGC TGGATATTAT TAATGCCAAA TTGGCTGCTG ATGATATTGG CGGTCTTGTT ACTCCCACAC CGGCATCCTC ACATGGTCTT CCTTTTGAAG TTTCTGAGGA AGTTGAGCAG GCAAATAGAA ATAGCCTATG GCTAACAGTT GGATTACTAT TAGCTGCTTT GGCAATTGGT ATTGGTGTTA CTGCTTATCA TAGGAAGAAG CTCCAAAGTA GATTACGTGA GTTAAAATTA CTATGGGGCT CTACTGGTGG GTCTGGTGGT GGTGGTGGTT TCGGCACTGA GCTGCACACG CGTGCTACAG ATACCGTTAG TTTGGGAACC ACTCTTTCAG AGCATGTTGC TCCAGCTCCG TCAGGATTGC GGCACCGACC TGCCGCTACT GATAGCGGAC CTCACGAAGT ACTGCCGTTT GAGGTGTGGG TGTTTGATAA TCTAGCCGTA GTGTATGATT CGATTGGTAT GAGTGATTTA TTTTACACTG TTAGAGAGTT TGTTGGGGTG TTTAACGGTG AGTTTGAAGG GCTTATAGAG CTGTTAGAGT CACCTGATGA TGATGATGGT GTGTATACAA ATGCTCCTAG AGACACTGCT ATTGATGCCT ACGAATCTCA AGAAAATTAC GATCGTATTG ATGTTGAGAC TGTTTTGATT GAGAGGCGGA TAAACTTGAA AAAGTTGCTC CTTGAAGAAG CAGAGCTAGA ACGACGAGAG CGAGATATGA CTATGATTGC TGATGAAGAA CAAAGAACAT TATTGCATAG GCTGGAAAGT TCTAGGGTCG AAGCAACTCA TGTAGTTACC AAAGCTGAAG CTGATGCTCG GGCGGCTGTG GCTATGGCTG CTCTTGCGTC TAAGGAAGCT AATGACTATG ATAGCAAGAT GGCTTTTGAC AGGTCCTGTA AAGAACAGGA ATTACGGTTG CGCGAACTTG AAGTGAATAG TATGCCGAGT AAAACAGAAA GGTATGTTCA TACTGGTATA CAAGGTGGTG CGCAATTGGC TGGAGCTATG GCTGTTGGTG CTATGCTGCG ACGTGGGGCT AGTTCTTCTT CTCAAAATGT CTCTGGTGGT GCTAATATTG GTTCTCGTTC GCAGAGTTTG ACTCGTGGTC GTAGTGCATC ACAACCTTTG TCATCGGTTG GTGGTTCTAC TCGTGGGGTT AATAATAATA ATATTAGTAA TACTAATCTT GTTAGGGCTG GTAATAGTGC TGCAGTTTCT GCTGGTAGAT CTACTAATAG TGGTAATAGT AATTTTTGGT CCAAATTGCG TGTTGGTGAA GGATGGTCCA AGTACAGCGT AGAACGGGCG GCGACAAGGG CGCAAAGGGC AATCGTGCCT CCAGCGCCCC CGTCCGCTCC CGCCGGATGA

Products

ProductCP
Descriptioncoat protein
MSSEGRYMTW KDMSHNKFMT DRWARVSDVV SVIKQSHAMD LSKAANLSII KTALAGLGSG WSDSNPFVSP MTRFPQTLTM YGALVLYVNL SDPEFALIMT KVNTLTDSGL ADNASANVRR DVVSGNKAES SGKTAGTNEN SAYTLTVSLA GLAQALRLEE LMWTRDKFED RFKLPWTPVQ GRTSPPGQ
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications709..711,aa:OTHER
MSSEGRYMTW KDMSHNKFMT DRWARVSDVV SVIKQSHAMD LSKAANLSII KTALAGLGSG WSDSNPFVSP MTRFPQTLTM YGALVLYVNL SDPEFALIMT KVNTLTDSGL ADNASANVRR DVVSGNKAES SGKTAGTNEN SAYTLTVSLA GLAQALRLEE LMWTRDKFED RFKLPWTPVQ GRTSPPGQQQ LAAARVTAHI RAAKRALLYP GDSPEWVGWK HFYPPPPYDV YDVPPLDIIN AKLAADDIGG LVTPTPASSH GLPFEVSEEV EQANRNSLWL TVGLLLAALA IGIGVTAYHR KKLQSRLREL KLLWGSTGGS GGGGGFGTEL HTRATDTVSL GTTLSEHVAP APSGLRHRPA ATDSGPHEVL PFEVWVFDNL AVVYDSIGMS DLFYTVREFV GVFNGEFEGL IELLESPDDD DGVYTNAPRD TAIDAYESQE NYDRIDVETV LIERRINLKK LLLEEAELER RERDMTMIAD EEQRTLLHRL ESSRVEATHV VTKAEADARA AVAMAALASK EANDYDSKMA FDRSCKEQEL RLRELEVNSM PSKTERYVHT GIQGGAQLAG AMAVGAMLRR GASSSSQNVS GGANIGSRSQ SLTRGRSASQ PLSSVGGSTR GVNNNNISNT NLVRAGNSAA VSAGRSTNSG NSNFWSKLRV GEGWSKYSVE RAATRAQRAI VPPAPPSAPA G

Publications