Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200047"

Accession numberr200047 [export]
Locus name60
Recode1 name60_h_bac_bt4
DescriptionDNA topoisomerase
Recode statusValidated

Organism

Genomic classViral Genome (Phage)
OrganismEnterobacteria phage T4 [details]
AcronymT4

Sequence

VariantEnterobacteria phage T4
GenBank IDsAF158101.6,M19728.1,X52686.1
SequenceDNA of 533 nucleotides [sequence]
OrganisationSequence (1)
Stemloop (1) [see structure]
Trans/Interaction (2)

Recoding event

Event typeHopping (position: 139)
Description3' stemloop structure, UAG stop signal, Nascent polypeptide, 5' Shine-Dalgarno sequence
ATGAAATTTG TAAAAATTGA TTCTTCTAGC GTTGATATGA AAAAATATAA ATTGCAGAAC AATGTTCGTC GTTCTATTAA ATCCTCTTCA ATGAACTATG CGAATGTCGC TATTATGACA GACGCAGATC ACGATGGATA GCCTTCGGGC TATCTATAGA AATACCTCAT AATTAAGAGA TTATTGGATT AGGTTCTATT TATCCTTCTC TGCTCGGATT TTTTAGTAAT TGGCCAGAAT TGTTTGAGCA AGGACGAATT CGCTTTGTCA AAACTCCTGT AATCATCGCT CAGGTCGGTA AAAAACAAGA ATGGTTTTAT ACAGTCGCTG AATATGAGAG TGCCAAAGAT GCTCTACCTA AACATAGCAT CCGTTATATT AAGGGACTTG GCTCTTTGGA AAAATCTGAA TATCGTGAGA TGATTCAAAA CCCAGTATAT GATGTTGTTA AACTTCCTGA GAACTGGAAA GAGCTTTTTG AAATGCTCAT GGGAGATAAT GCTGACCTTC GTAAAGAATG GATGAGCCAG TAG

Product

Product60
DescriptionDNA topoisomerase type II
Modifications138..186:hopping
MKFVKIDSSS VDMKKYKLQN NVRRSIKSSS MNYANVAIMT DADHDGLGSI YPSLLGFFSN WPELFEQGRI RFVKTPVIIA QVGKKQEWFY TVAEYESAKD ALPKHSIRYI KGLGSLEKSE YREMIQNPVY DVVKLPENWK ELFEMLMGDN ADLRKEWMSQ

Publications