Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200060"

Accession numberr200060 [export]
Locus namecoat protein - readthrough
Recode1 namecoat_r_vir_bwyv
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

GenBank IDsX07653.1
SequenceRNA of 1956 nucleotides [sequence]
OrganisationSequence (2)

Recoding event

Event typeReadthrough (position: 601)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCAG TAGGTCGTAG AGGACCTAGA CGCGCAAATC AAAATGGCAC AAGAAGGAGG CGCCGTAGAA CAGTTCGGCC AGTGGTTGTG GTCCAACCCA ATCGAGCAGG ACCCAGACGA CGAAATGGTC GACGCAAGGG AAGAGGAGGG GCAAATTTTG TATTTAGACC AACAGGCGGG ACTGAGGTAT TCGTATTCTC AGTTGACAAC CTTAAAGCCA ACTCCTCCGG GGCAATCAAA TTCGGCCCCA GTCTATCGCA ATGCCCAGCG CTTTCAGACG GAATACTCAA GTCCTACCAT CGTTACAAGA TCACAAGTAT CCGAGTTGAG TTTAAGTCAC ACGCGTCCGC CAATACGGCA GGCGCTATCT TTATTGAGCT CGACACCGCG TGCAAGCAAT CAGCCCTGGG TAGCTACATT AATTCCTTCA CCATCAGCAA GACCGCCTCC AAGACCTTCC GGTCAGAGGC AATTAATGGG AAGGAATTCC AGGAATCAAC GATAGACCAA TTTTGGATGC TCTACAAGGC CAATGGAACT ACCACTGACA CGGCAGGACA ATTTATCATT ACGATGAGTG TCAGTTTGAT GACGGCCAAA TAGGTAGACT CCTCAACACC GGAACCAAAA CCTGCACCGG AACCAACACC AACCCCCCAG CCAACGCCGG CTCCACAGCC CACACCTGAA CCAACTCCTG CACCTGTCCC CAAAAGATTC TTCGAGTATA TCGGAACTCC TACCGGTACA ATCTCGACTA GAGAGAACAC TGACAGTATA TCTGTCAGCA AGCTCGGTGG ACAGTCGATG CAGTACATTG AGAATGAGAA ATGTGAAACG AAAGTCATCG ATTCCTTTTG GAGCACTAAC AACAACGTTT CTGCGCAAGC AGCTTTCGTT TATCCAGTGC CAGAGGGATC ATACAGCGTT AACATTTCGT GCGAAGGCTT CCAGTCAGTT GACCACATCG GTGGCAACGA GGACGGCTAT TGGATTGGTT TAATTGCCTA CTCCAATTCG TCTGGCGATA ATTGGGGAGT TGGCAATTAC AAAGGGTGCA GTTTTAAGAA TTTCTTGGCA ACCAACACTT GGAGACCAGG CCACAAAGAT CTCAAGTTGA CTGATTGCCA GTTCACAGAT GGACAAATAG TTGAAAGGGA CGCCGTGATG TCTTTCCACG TAGAAGCAAC AGGCAAGGAT GCCAGCTTCT ACCTCATGGC TCCCAAAACA ATGAAAACTG ACAAATACAA CTATGTTGTC TCATATGGAG GGTACACAAA CAAGCGAATG GAATTCGGTA CCATATCTGT GACATGTGAT GAATCCGATG TTGAGGCAGA ACGAATAACA AGGCACGCTG AAACGCCCAT ACGTTCTAAA CATATTCTTG TTTCTGAGCG GTATGCGGAA CCATTGCCCA CCATAGTCAA CCAAGGCTTG TGTGATGTGA AAACTCCCGA GCAAGAACAA ACACTGGTGG ATGAAGATGA CAGACAAACT GTTTCTACTG AATCTGATAT AGCACTCCTG GAGTATGAGG CTGCAACAGC TGAGATTCCG GATGCTGAAG AGGACGTTTT GCCCTCCAAG GAACAGTTGT CTTCAAAACC AATGGATACG TCTGGCAATA TAATACCAAA ACCCAAGGAA CCTGAAGTAC TTGGGACATA CCAAGGACAG AACATTTATC CTGAAGACGT ACCTCCAATG GCGCGGCAGA AATTGAGAGA AGCCGCGAAT GCGCCTTCCA CGCTACTCTA TGAAAGAAGA ACCCCAAAGA AGAGTGGCAA CTTTTTATCC AGACTTGTAG AAGCGAATAG GTCCCCTACT ACTCCCACTG CCCCATCCGT GTCAACTACT TCAAACATGA CAAGGGAGCA GCTCCGGGAG TACACTAGGA TTAGAAATTC CAGCGGAATC ACAGCAGCAA AGGCGTACAA GGCGCAATTC CAGTGA

Products

Productcoat
Descriptioncoat protein, aphid transmission, movement
MNSVGRRGPR RANQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANFVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASANTA GAIFIELDTA CKQSALGSYI NSFTISKTAS KTFRSEAING KEFQESTIDQ FWMLYKANGT TTDTAGQFII TMSVSLMTAK
Productreadthrough
Descriptioncoat protein, readthrough
Modifications601..603,aa:OTHER
MNSVGRRGPR RANQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANFVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASANTA GAIFIELDTA CKQSALGSYI NSFTISKTAS KTFRSEAING KEFQESTIDQ FWMLYKANGT TTDTAGQFII TMSVSLMTAK QVDSSTPEPK PAPEPTPTPQ PTPAPQPTPE PTPAPVPKRF FEYIGTPTGT ISTRENTDSI SVSKLGGQSM QYIENEKCET KVIDSFWSTN NNVSAQAAFV YPVPEGSYSV NISCEGFQSV DHIGGNEDGY WIGLIAYSNS SGDNWGVGNY KGCSFKNFLA TNTWRPGHKD LKLTDCQFTD GQIVERDAVM SFHVEATGKD ASFYLMAPKT MKTDKYNYVV SYGGYTNKRM EFGTISVTCD ESDVEAERIT RHAETPIRSK HILVSERYAE PLPTIVNQGL CDVKTPEQEQ TLVDEDDRQT VSTESDIALL EYEAATAEIP DAEEDVLPSK EQLSSKPMDT SGNIIPKPKE PEVLGTYQGQ NIYPEDVPPM ARQKLREAAN APSTLLYERR TPKKSGNFLS RLVEANRSPT TPTAPSVSTT SNMTREQLRE YTRIRNSSGI TAAKAYKAQF

Publication