Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200061"

Accession numberr200061 [export]
Locus namecoat protein-readthrough
Recode1 namecoat_r_vir_bydv1
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus-PAS [details]
AcronymBYDV-PAS

Sequence

GenBank IDsAF218798.2
SequenceRNA of 1953 nucleotides [sequence]
OrganisationSequence (3)

Recoding event

Event typeReadthrough (position: 601)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCAG TAGGCCGTAG AGGACCTAGA CGAGCAAATC AAAATGGCCC AAGAAGGCGG AGCCGTAGAA CAATTCGGCC AGTGGTTGTG GTCCAACCCA ATCGAGCAGG ACCCAGACGA CGAAATGGTC GACGCTCAGG AAGAAGAGGG CCAAATTCTA TACCTGGATC AACAGGCAGG ACTGAGGTAT TCATATTCTC AGTCGACAAC CTTAAAGCCA ACTCTTCCGG GACAATCAAA TTCGGCCCCA GTTTATCGCA ATGCCCAGCG CTTTCAGACG GAATACTTAA GTCCTACCAC CGTTACAAGA TCACAAGTAT CCGTGTTAAG TTTCAGTCAC ACGCGTCCGC CGCTACGTCG GGCGCTATCT TTGTTGAACT CGACACCGCG TGCAAGCAAT CAGCCTTGGG TAGCTACATT AATTCCTTCA CCATCAGCAA AACTGCCTCC AAGTCCTTCA GAGCCGAGGC GATTAATGGG AAGGAATTCC AAGAATCAAC GATAGACCAA TTCTGGCTAC TCTACAAGGC AAATGGGACC ACTACTGACA CCGCTGGACA GTTCATCATA ACGATAAACG TCAGTATGTT AACTCCCAAA TAGGTAGACT CCTCAACACC GGAACCGAAA CCAGCACCAG AGCCAACACC AGCCCCACAA CCCACTCCAA CCCCACAGCC CACACCAGAA CCAACTCCTG CACCTGTCCC CAAGAGATTC TTTGAATACG TCGGAACTCC AACCGGCGTG ATTTCAACGC GAGAAAACTC TGACAGTATT TCTGTCAGCA AGCTTGGTGG ACAATCCATG CAGTACATCG AGAATGAGAA ATGTGAATCA AAGGTTATTG ATTCCTTCTG GAGCACCAAC AACAACGTTT CTGCCCAGGC AGCATTCGTT TTTCCAGTGC CAGAAGGGTC ATACAGTGTT AACATTTCGT GTGAAGGCTT TCAATCCGTT GACCACATCG GTGGTAACGA GGATGGCTAC TGGATTGGGC TCATCGCTTA CTCCAATTCA TCAGGAGACA ACTGGGGAAT CGGTAATTAC AAAGGGTGCA GTTTCAAAAA TTTCTTGGCA ACAAACACTT GGAGACCTGG CCACAAAGAT CTCAAGTTGA ATGACTGCCA GTTCACAGAT GGACAAATAG TTGAAAGGGA TGGCGTGATA TCTTTTCATG TAGATGCAAC AGGTACTGAC GCCTGTTTCT ACCTTGCAGC CCCCAAGACA ATGAAAACTG ACAAATACAA CTATGTTGTT TCCTATGGAG GGTACACGAA CAAACGGATG GAGTTCGGTA CCATATCTGT GACATTTGAT GAATCCGATG TTGAGGCAGA ACGCATTGCC AGGCATTCAG AGACCCCGGC TCGTCACAAC CATATACTCC TATCTGAGAG TTACGAAGAG CCATTACCCA CCATAATCGA CCAAGGCTTG TGTGATGTGA AAACTCCCGA GCAAGAAATT GTGAAGGTGG ATGAAGAGGA CAGACAGACT GTTTCCACTG AACCTGATAT AGCATTGCAG GAATATGAAG CTGCCACAGC TGAAATACCT GATGCTGAAG AGGACGTTTT GCCCTCCAAG GAACAACTGT CTGTCAAACC CGTGGACTCA TCCGGAACAC CACTTCCAAA ATCTAAGGAA CCTGAAGTAC TTGGAACGTA TCAGGGTATG AATATATACC CAGAGGATGT GCCACCGGTG GCTCGTCAAA AGCTGCGCGA GGCAGCAAAA GCCCCTTCCA CCATGCTTTA CGACAAGGCC CCCAAGGGGA GCAAATCAAT TCTGTCGCGA TTTGTGGAAG GCAATAGGTC CAAGGCAACC CCTGCTGCTC CTACAGTGTC AACTACTTCC AATATGACAA GAGAGCAGTT GCGAGAGTAC ACTCGTATTA GAAATAGTTT AGGTGTTACC GCAGCAAAAG AGTACAAAGC GCAATTTCAG TGA

Products

Productcoat
Descriptioncoat protein, aphid transmission, movement
MNSVGRRGPR RANQNGPRRR SRRTIRPVVV VQPNRAGPRR RNGRRSGRRG PNSIPGSTGR TEVFIFSVDN LKANSSGTIK FGPSLSQCPA LSDGILKSYH RYKITSIRVK FQSHASAATS GAIFVELDTA CKQSALGSYI NSFTISKTAS KSFRAEAING KEFQESTIDQ FWLLYKANGT TTDTAGQFII TINVSMLTPK
Productreadthrough
Descriptioncoat protein, readthrough
Modifications601..603,aa:OTHER
MNSVGRRGPR RANQNGPRRR SRRTIRPVVV VQPNRAGPRR RNGRRSGRRG PNSIPGSTGR TEVFIFSVDN LKANSSGTIK FGPSLSQCPA LSDGILKSYH RYKITSIRVK FQSHASAATS GAIFVELDTA CKQSALGSYI NSFTISKTAS KSFRAEAING KEFQESTIDQ FWLLYKANGT TTDTAGQFII TINVSMLTPK QVDSSTPEPK PAPEPTPAPQ PTPTPQPTPE PTPAPVPKRF FEYVGTPTGV ISTRENSDSI SVSKLGGQSM QYIENEKCES KVIDSFWSTN NNVSAQAAFV FPVPEGSYSV NISCEGFQSV DHIGGNEDGY WIGLIAYSNS SGDNWGIGNY KGCSFKNFLA TNTWRPGHKD LKLNDCQFTD GQIVERDGVI SFHVDATGTD ACFYLAAPKT MKTDKYNYVV SYGGYTNKRM EFGTISVTFD ESDVEAERIA RHSETPARHN HILLSESYEE PLPTIIDQGL CDVKTPEQEI VKVDEEDRQT VSTEPDIALQ EYEAATAEIP DAEEDVLPSK EQLSVKPVDS SGTPLPKSKE PEVLGTYQGM NIYPEDVPPV ARQKLREAAK APSTMLYDKA PKGSKSILSR FVEGNRSKAT PAAPTVSTTS NMTREQLREY TRIRNSLGVT AAKEYKAQF

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