Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200081"

Accession numberr200081 [export]
Locus namednaX
Recode1 namednaX_m_pro_eco
DescriptionDNA polymerase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEscherichia coli [details]

Sequence

GenBank IDsAE000153.1,U82664.1,M38777.1
SequenceDNA of 1932 nucleotides [sequence]
OrganisationSequence (1)
Stemloop (1) [see structure]

Recoding event

Event type-1 Frameshifting (position: 1,290)
DescriptionSet the proper ratio between gamma and tau subunits
ATGAGTTATC AGGTCTTAGC CCGAAAATGG CGCCCACAAA CCTTTGCTGA CGTCGTCGGC CAGGAACATG TGCTGACCGC ACTGGCGAAC GGCTTGTCGT TAGGGCGTAT TCATCATGCT TATCTTTTTT CCGGCACCCG TGGCGTCGGA AAAACCTCTA TCGCCCGACT GCTGGCGAAG GGGCTAAACT GCGAAACCGG CATTACCGCG ACGCCGTGCG GCGTGTGCGA TAACTGTCGT GAAATCGAGC AGGGGCGCTT TGTCGATCTG ATTGAAATCG ACGCCGCCTC GCGCACCAAA GTTGAAGATA CCCGCGACCT GCTGGATAAC GTCCAGTACG CTCCGGCGCG TGGTCGTTTC AAAGTTTATC TGATCGACGA AGTGCATATG CTGTCGCGCC ACAGCTTTAA CGCACTGTTA AAAACCCTTG AAGAGCCGCC GGAGCACGTT AAGTTTCTGC TGGCGACGAC CGATCCACAG AAATTGCCGG TGACGATTTT GTCACGCTGT CTGCAATTTC ATCTCAAGGC GCTGGATGTC GAGCAAATTC GCCATCAGCT TGAGCACATC CTCAACGAAG AACATATCGC TCACGAGCCG CGGGCGCTGC AATTGCTGGC ACGCGCCGCT GAAGGCAGCC TGCGAGATGC CTTAAGTCTG ACCGACCAGG CGATTGCCAG CGGTGACGGC CAGGTTTCAA CCCAGGCGGT CAGTGCGATG CTGGGTACGC TTGACGACGA TCAGGCGCTG TCGCTGGTTG AAGCGATGGT CGAGGCCAAC GGCGAGCGCG TAATGGCGCT GATTAATGAA GCCGCTGCCC GTGGTATCGA GTGGGAAGCG TTGCTGGTGG AAATGCTCGG CCTGTTGCAT CGTATTGCGA TGGTACAACT TTCGCCTGCT GCACTTGGCA ACGACATGGC CGCCATCGAG CTGCGGATGC GTGAACTGGC GCGCACCATA CCGCCGACGG ATATTCAGCT TTACTATCAG ACGCTGTTGA TTGGTCGCAA AGAATTACCG TATGCGCCGG ACCGTCGCAT GGGCGTTGAG ATGACGCTGC TGCGCGCGCT GGCATTCCAT CCGCGTATGC CGCTGCCTGA GCCAGAAGTG CCACGACAGT CCTTTGCACC CGTCGCGCCA ACGGCAGTAA TGACGCCAAC CCAGGTGCCG CCGCAACCGC AATCAGCGCC GCAGCAGGCA CCGACTGTAC CGCTCCCGGA AACCACCAGC CAGGTGCTGG CGGCGCGCCA GCAGTTGCAG CGCGTGCAGG GAGCAACCAA AGCAAAAAAG AGTGAACCGG CAGCCGCTAC CCGCGCGCGG CCGGTGAATA ACGCTGCGCT GGAAAGACTG GCTTCGGTCA CCGATCGCGT TCAGGCGCGT CCGGTGCCAT CGGCGCTGGA AAAAGCGCCA GCCAAAAAAG AAGCGTATCG CTGGAAGGCG ACCACTCCGG TGATGCAGCA AAAAGAAGTG GTCGCCACGC CGAAGGCGCT GAAAAAAGCG CTGGAACATG AAAAAACGCC GGAACTGGCG GCGAAGCTAG CGGCAGAAGC CATTGAGCGC GACCCGTGGG CGGCACAGGT GAGCCAACTT TCGCTACCAA AACTGGTCGA ACAGGTGGCG TTAAATGCCT GGAAAGAGGA GAGCGACAAC GCAGTATGTC TGCATTTGCG CTCCTCTCAG CGGCATTTGA ACAACCGCGG TGCACAGCAA AAACTGGCTG AAGCGTTGAG CATGTTAAAA GGTTCAACGG TTGAACTGAC TATCGTTGAA GATGATAATC CCGCGGTGCG TACGCCGCTG GAGTGGCGTC AGGCGATATA CGAAGAAAAA CTTGCGCAGG CGCGCGAGTC CATTATTGCG GATAATAATA TTCAGACCCT GCGTCGGTTC TTCGATGCGG AGCTGGATGA AGAAAGTATC CGCCCCATTT GA

Products

ProductdnaX-tau
DescriptionDNA polymerase III holoenzyme subunits, tau (normal translation)
MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK GLNCETGITA TPCGVCDNCR EIEQGRFVDL IEIDAASRTK VEDTRDLLDN VQYAPARGRF KVYLIDEVHM LSRHSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV EQIRHQLEHI LNEEHIAHEP RALQLLARAA EGSLRDALSL TDQAIASGDG QVSTQAVSAM LGTLDDDQAL SLVEAMVEAN GERVMALINE AAARGIEWEA LLVEMLGLLH RIAMVQLSPA ALGNDMAAIE LRMRELARTI PPTDIQLYYQ TLLIGRKELP YAPDRRMGVE MTLLRALAFH PRMPLPEPEV PRQSFAPVAP TAVMTPTQVP PQPQSAPQQA PTVPLPETTS QVLAARQQLQ RVQGATKAKK SEPAAATRAR PVNNAALERL ASVTDRVQAR PVPSALEKAP AKKEAYRWKA TTPVMQQKEV VATPKALKKA LEHEKTPELA AKLAAEAIER DPWAAQVSQL SLPKLVEQVA LNAWKEESDN AVCLHLRSSQ RHLNNRGAQQ KLAEALSMLK GSTVELTIVE DDNPAVRTPL EWRQAIYEEK LAQARESIIA DNNIQTLRRF FDAELDEESI RPI
ProductdnaX-gamma
DescriptionDNA polymerase III holoenzyme subunits, gamma (frameshift product)
Modifications1290..1290:ribosomal_frameshift
MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK GLNCETGITA TPCGVCDNCR EIEQGRFVDL IEIDAASRTK VEDTRDLLDN VQYAPARGRF KVYLIDEVHM LSRHSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV EQIRHQLEHI LNEEHIAHEP RALQLLARAA EGSLRDALSL TDQAIASGDG QVSTQAVSAM LGTLDDDQAL SLVEAMVEAN GERVMALINE AAARGIEWEA LLVEMLGLLH RIAMVQLSPA ALGNDMAAIE LRMRELARTI PPTDIQLYYQ TLLIGRKELP YAPDRRMGVE MTLLRALAFH PRMPLPEPEV PRQSFAPVAP TAVMTPTQVP PQPQSAPQQA PTVPLPETTS QVLAARQQLQ RVQGATKAKK E

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