Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200090"

Accession numberr200090 [export]
Locus nameedr
Recode1 nameedr_m_euk_mmus
Descriptionedr
Recode statusValidated

Organism

Genomic classEukaryota (Chromosome)
OrganismMus musculus [details]

Sequence

GenBank IDsAJ006464.1
SequencemRNA of 5166 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]

Recoding event

Event type-1 Frameshifting (position: 1,396)
Descriptionnull
GAATTCCTGC AGCCGGCCGC CCTGACCAAC TACGACCTGG GGAGAGCAGC CAACCGAGAA GGTCCACCGA GCCTCGCCTA GGTCTGCTGC GCGGGCTGCG GTCCGGAGCC TTCTCCGCGG TCACCCAGTG GACCGGGCCG TCGCGGGACC CCTCATCCTT CGTGGCATCG CAGAGGAATC CTCGTGTGGA ACAGGCGGGT TTTAAGAACC AAAAGACGCC AACCACGAGG GTCCCAGGAT CCAGGGCTCC CTCCCCAGGG GAGTGAAGCC CCTCTCACCG CAGCCATGGC TGTGCGGTGG TTCCTCCAAC TGCCCGCCCC CTCCCCCTCC CCCTCCTCCC AACAACAACA ACAACAACAA CCCAAAGAGC CCAGGCGTGC CTGACGCCGA AGATGATGAT GAACGCAGAC ACGATGAGCT CCCTGAAGAC ATCAACAACT TTGACGAAGA CATGAACAGG CAGTTTGAGA ATATGAACCT GCTGGATCAG GTGGAGTTGC TTGCACAGAG CTACAGTCTG CTGGATCATT TAGATGACTT TGATGATGAT GATGAAGACG ATGACTTTGA TCCAGAACCT GACCAGGATG AGCTCCCTGA GTACAGTGAC GATGATGACC TGGAGCTTCA GGGTGCTGCA GCAGCCCCTA TCCCAAACTT TTTCTCCGAT GATGACTGCC TTGAAGACCT TCCTGAGAAG TTCGATGGCA ACCCTGACAT GCTGGGTCCT TTCATGTATC AGTGCCAGCT CTTCATGGAA AAGAGCACCA GAGATTTCTC AGTTGACCGC ATCCGTGTGT GCTTCGTGAC AAGCATGCTG ATCGGCCGTG CCGCCCGCTG GGCTACTGCC AAGCTGCAAA GATGTACTTA CCTGATGCAA CAAACTAACA CTGCCTTTAT GATGGAGCTG AAGCATGTCT TTGAAGACCC TCAGAGACGT GAAGCTGCCA AACGCAAGAT CAGACGTCTG CGCCAGGGCC CTGGGCCTGT TGTGGACTAC TCCAATGCAT TCCAGATGAT TGCCCAGGAC CTGGATTGGA CTGAGCCTGC CCTGATGGAT CAGTTCCAGG AAGGTCTCAA CCCAGACATT CGCGCAGAGC TGTCTCGCCA GGAGGCCCCC AAGACCCTGG CTGCTCTGAT TACTGCCTGT ATTCACATCG AGAGAAGGCT GGCTCGTGAC GCTGCTGCAA AGCCCGATCC TTCACCCAGA GCCTTGGTGA TGCCTCCAAA CAGCCAGACC GATCCCACCG AGCCTGTGGG AGGTGCCCGC ATGCGCCTGT CCAAGGAAGA AAAGGAGAGA CGCCGCAAAA TGAATTTGTG TCTCTACTGT GGCAATGGAG GCCATTTCGC CGACACGTGT CCAGCGAAAG CCTCCAAGAA TTCGCCGCCG GGAAACTCCC CGGCCCCGCT GTAGGGGGAC CTTCAGCGAC AGGGCCAGAA CGAATAAGGT CCCCACCCTC CGAGGCTTCG ACTCAGCACC TGCAAGTGAT GCTCCAGATT CATATGCCGG GCAGACCCAC CCTGTTTGTC CGAGCTATGA TTGATTCTGG TGCATCTGGC AACTTCATTG ATCAAGACTT TGTCATACAA AATGCAATTC CTCTCAGAAT CAAAGACTGG CCAGTGATGG TGGAAGCTAT TGATGGGCAT CCAATTGCCT CGGGCCCAAT CATTTTGGAA ACCCACCACC TGATAGTTGA TCTGGGAGAC CACCGTGAGA TACTGTCATT TGATGTGACT CAGTCTCCAT TCTTTCCTAT TGTCCTAGGA ATTCGTTGGC TGAGCACGCA TGACCCTCAC ATTACCTGGA GTACCCGCTC CATTGTCTTC AACTCTGATT ACTGCCGACT CTGCTGCCGG ATGTTTGCAC AGATACCTTC TAACTTACTG TTTACAGCGC CACAACCGAG TTCGCATCCG TATCTACTTC ATCATGTGCA TCCGCATGTC CATCCGTATA TGCATCAGCA TCTGCATCAG CATCTGCATC AGTTTCTGCA TCCAGATCCG CATCAGTATC CGCATCCGGA TCCGCATTAT CATCATCATC AGCAGGCGGA TATGCAGCAC CAACTGCAGC AGTATCTATA TCAGTATTTG TATTACCACC TGTATCCGGT TATGCACCAC CATCTGCCTC CAGATCAGCA TGAGCATCTG CATGAGTATC TGCATCAGTA TCTGCATCAG TATCTGCATC AGTTTCTGCA TCACCACCTG CATCCGGATC TGCATCAGCA TCTGTATCAG TATCTGCATA ACCATATGAA TCCGGATCCA CATCACCACT CTCATCCAGA TCCCCCTCAG GATCCACATC ACCCTCCACA TCAGGATCCA CATCAGCATC CGGATCCCCA TCAGGATGCA CATCAGGATC CCCATCAGGA TCCCCATCAG GATGCACATC AGGATCCACA TCAGCATCCG GATCCCCATC AGGATCCTCC ACATCAGGAT CCACATCAGG ATGCACATCA GGATCCCCAT ATGGATCCAC ACCTGCATCA GCACCAGCAT CCGCAGCCGC AGCCGCATCC ACAACAGTAT CCTAACCATC CTCAGCAGCC ACCATTCTTC TACCACATGG CTGGATTCAG AATTTACCAC CCTGTAAGGT ATTACTATAT TCAGAATGTG TATACACCTG TTGATGAGCA TGTCTATCCG GGTCACCGGG TGGTTGACCC TAACATTGAG ATGATTCCTG GAGCGCACAG CCTGCCCAGT GGACATTTGT ACTCAATGTC TGAGTCTGAA ATGAATGCTC TGCGAAATTT CGTGGACAGG AATGTTAAAG ATGGGCTCAT GACTCCCACT GTGGCGCCCA ATGGAGCCCA AGTCCTGCAA GTGAAAAGAG GGTGGAAACT CCAAGTCACT TACAATTGCC GAGCTCCACA GAGTGGCACC ATCCAAAATC AGTACCTACG CATGTCTCTT CCAAATATGG GAGACCCTGC ACACCTGGCA AGCTATGGTG AATTTGTCCA AGTTCCTGGC TACCCATATC CAGCCTATGT TTACTATACA AGCCCGCATA TGATGACTGC GTGGTACCCA GTAGGACGAG ATGTACATGG ACGAATAATC GTTGTGCCTG TTGTAATCAC CTGGTCTCAA AATACGAACC GCCAGCCTCC GGTGCCCCAG TATCCTCCTC CGCAGCCACC TCCACCACCA CCACCACCTC CACCGCCACC ACCACCTCCA CCAGCATCAT CCTGCAGTGC TGCGTAGAAC CTGTCATGTC CTTTGTAGTC TCTGCCCTCA ACTTGATCCT GTGCAGCTTC TCAATCTATG ACTGTGTGGT ACTGGACCTT CAGAGGCGCA CAGAGCTCAA GTCAGTTTTC GTCTTGACTG CCACTTTATA AGTTGACAGG CCTGGGTTTT ACTTGTTAAA ACCTCTCACC ATCTCAATCA CAGGCTGCCA AGTGTCTTTA CAAAGAAGCT GATACAAACA CAGGCCATGC TGATTTCTTA CAGAGGGAGA GAAGAGGAAG AGAAGAAGAA AGAGGAGGAA GAGGACATGA CTTGCCCATA TGCTGGGCAC CTTATAAAGG AAGCCAGACT TTTCGGTGCA GTATGGAAAG GCTTCCGTGA TTCTCTTGCT GCACCCCACG AAACTTCACC ACCTTCAAAC TCCATTTTCA CGGTTCCGTT AATTTTCAAG GAGCAGCAAC TCGACTGGTT CTCTGCTACA TGAAACACCT CAGCTTGAAA AGGAAGTGCT CTCTCAGACT GACTTGTGAG TGTGCCTTCA CATTCTGGTG CAAATCATGT GTACCCAAGA ACTCTGACAT AGCATCTTAC CATCATCATG CCAGGAATTG GTTTCCTTAA AGTGTGACAC TTGGCAACCA GAAGCGTCTG GTGGCTTCAG GTGTGTTAGG GTTTTGTAGA AAGTTGTAAC CACCTCTCAG TCATGCAAGA GGGTACATCA AAAAGACTTC TAAATTTGGT ACCCAGACTT TGACAAGAGC CTGTGAGTTA GTTCATTGTA ACCAACTTGT CAGGAACTTC AGCAAGAATT TTCATGAATG TTGTTAATTG GCTGGAGAAA TACCAGCAAA GTTTTGCAAT CATCCACCCA TTTGTCTGCC ATTGTGCATC TGGACATCCA TCAACCGCCC ACTCAGTGGC ATCTACCATG AAGATGTTTA GAGACGGGAA ATGATTTTGC ACCCAGATCC ACACTCCTCT CATGTCAGAT ATTTGGAATT AGAGCACCGG GAATCGCCTT GAAGATATGA ACTTCTAAGA ATGGAGTCTC TTGCTACTAC CTTGAAACAT TTGTTTATCC TCTCTTTCTG TTTGATTCTA CTACTACCAT TAACCCTGCT GCAGGATTTG TCACCATTCT GCCTGACTGC TGAGACTCCA TTTTGCTGCT ATGCAAGGAG ATGAAAGAGG CAGGCCTAAA GGAGCAGTAG GACATAACAT GGTTTTTATT TCTATCTGTC ATGATCTTAA TGGTGAAGTT TCCTTTTTCG TCAGCATTTA TCTCTTTGTT ATCCTGACAT GTTTTAATTA GTTTAGTGGG TTTTTTTTTT TCTATTGGTG GTGGTGTTCT TTTGTTGTTG TTTTTTGTGG TCGTCATTTT GATTTTGGAT CACTTCGTGT TTTACAGTAA TTACTTTTAA ATGGTGCATT TGCTTCTGAT TTTTTTTTTT TTATGAAGCA TCACATCAGT TTACCTCATA TCTCAATTCC ATCCTTCATG CATTTTTTTT TTAACTCATT TGATCTTCAA GCTGCAGAGG GCCTAGCAAT GGGTCATCAC CTGCAGCCCT GGCATGTACA CACGGACATT TGCCACCACT GAAAGCAAAC AGTTGGAGAA GTTGGCCACC TGAGTCAAGG AGGTGGTGCT GGTGTGAGTT CACAGCTCAC AGGGGACGGT GAACGTTGAC ATTGACTTTG GCAGTGTGTA CTATGCTCTA CTCCTATATA TACTCTATAG ATGTTAGGCA TTAAGGATAA GTGATCTTAA ATTTACTGAA ATTTTGTTAA GTTGATTAGA TTTACATTAA TTGTTTATAT TGTGTTTTTT CTTTTATTTT AGCACTTCCA ACAAAAATGC CTTTATTCAT TTATTAGGAA GAAATTGGAG TGGCGAACAC AAACTAGCAA AATTAATTAA TTGGCTGTGG GCCCAAATTT GAATTC

Products

Productedr
DescriptionEmbryonal carcinoma differentiation regulated
MNRQFENMNL LDQVELLAQS YSLLDHLDDF DDDDEDDDFD PEPDQDELPE YSDDDDLELQ GAAAAPIPNF FSDDDCLEDL PEKFDGNPDM LGPFMYQCQL FMEKSTRDFS VDRIRVCFVT SMLIGRAARW ATAKLQRCTY LMQQTNTAFM MELKHVFEDP QRREAAKRKI RRLRQGPGPV VDYSNAFQMI AQDLDWTEPA LMDQFQEGLN PDIRAELSRQ EAPKTLAALI TACIHIERRL ARDAAAKPDP SPRALVMPPN SQTDPTEPVG GARMRLSKEE KERRRKMNLC LYCGNGGHFA DTCPAKASKN SPPGNSPAPL
Productedr-orf2
DescriptionEmbryonal carcinoma differentiation regulated
Modifications1396..1396:ribosomal_frameshift
MNRQFENMNL LDQVELLAQS YSLLDHLDDF DDDDEDDDFD PEPDQDELPE YSDDDDLELQ GAAAAPIPNF FSDDDCLEDL PEKFDGNPDM LGPFMYQCQL FMEKSTRDFS VDRIRVCFVT SMLIGRAARW ATAKLQRCTY LMQQTNTAFM MELKHVFEDP QRREAAKRKI RRLRQGPGPV VDYSNAFQMI AQDLDWTEPA LMDQFQEGLN PDIRAELSRQ EAPKTLAALI TACIHIERRL ARDAAAKPDP SPRALVMPPN SQTDPTEPVG GARMRLSKEE KERRRKMNLC LYCGNGGHFA DTCPAKASKN SPPGNLPGPA VGGPSATGPE RIRSPPSEAS TQHLQVMLQI HMPGRPTLFV RAMIDSGASG NFIDQDFVIQ NAIPLRIKDW PVMVEAIDGH PIASGPIILE THHLIVDLGD HREILSFDVT QSPFFPIVLG IRWLSTHDPH ITWSTRSIVF NSDYCRLCCR MFAQIPSNLL FTAPQPSSHP YLLHHVHPHV HPYMHQHLHQ HLHQFLHPDP HQYPHPDPHY HHHQQADMQH QLQQYLYQYL YYHLYPVMHH HLPPDQHEHL HEYLHQYLHQ YLHQFLHHHL HPDLHQHLYQ YLHNHMNPDP HHHSHPDPPQ DPHHPPHQDP HQHPDPHQDA HQDPHQDPHQ DAHQDPHQHP DPHQDPPHQD PHQDAHQDPH MDPHLHQHQH PQPQPHPQQY PNHPQQPPFF YHMAGFRIYH PVRYYYIQNV YTPVDEHVYP GHRVVDPNIE MIPGAHSLPS GHLYSMSESE MNALRNFVDR NVKDGLMTPT VAPNGAQVLQ VKRGWKLQVT YNCRAPQSGT IQNQYLRMSL PNMGDPAHLA SYGEFVQVPG YPYPAYVYYT SPHMMTAWYP VGRDVHGRII VVPVVITWSQ NTNRQPPVPQ YPPPQPPPPP PPPPPPPPPP PASSCSAA

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