Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200103"

Accession numberr200103 [export]
Locus namefdhA
Recode1 namefdhA_s_arc_mjan
Descriptionformate dehydrogenase
Recode statusValidated

Organism

Genomic classArchaea (Chromosome)
OrganismMethanocaldococcus jannaschii [details]

Sequence

GenBank IDsU67575.1
SequenceDNA of 2151 nucleotides [sequence]
OrganisationSECIS (1) [see structure]

Recoding event

Event typeSelenocysteine (position: 521)
DescriptionSelenocysteine incorporation at UGA codon.
TTTACAGTTT TTAAACTGAT ATAGCACCCG CCACCCTGCG AACCCAATAT AAATAATACA AGGGAGCAGG TGGCGAAAAA AGACCCGAAG CATGCACAAA AATAAAAATT TAAAAGAATT AGGTGAAACC ATGGAATTTA AGATTGTAAA TACTATCTGC CCTTATTGTG GAGTAGGTTG TGGTTTGGGG TTGGTAGTTA AAGATGGCAG AGTCATAGGT ATTCATCCTA ACAAAAGACA TCCAATAAAT GAAGGAAAGT TATGTGCTAA AGGAAATTAT TGCTATCAGT TTATACACAG TAAGGATAGA TTAACAAAAC CATTGATAAA AAAAGAAAGT GGTTTTGTTG AAACTACATG GAATAAAGCT TTAGAAGTAA TTGCAGAAAA TTTAAAGACC TATAAGGATG AGATTGGCTT TTTTTCATCT GCAAGATGCA CTAACGAAGA TAACTACATT TTACAAAAAT TTGCAAGGGT TGCTTTAAAG ACAAACAATA TTGACCATTG TGCAAGGTTG TGACATTCAG CAACTGTTAC TGGAATGAGT GCATGCTTCG GGTCCGGTGC TATGACAAAC AGCATAGAGG ATATTGAATT AGCAGATTGT ATATTGATAA TTGGCTCAAA CACCTTTGAA CAACACCCAT TAATCGCAAG AAGAATAATG AGAGCCAAAG ATAAAGGAGC AAAAATAATA GTTATAGACC CAAGAAGAAC AATAACTGCA AAAAACTCTG ATATATATCT ACAAATAATT CCTGGAACTA ATGTTGCCTT AATAAACGCC ATGATTAATG TAATTATAAA AGAAAATTTG ATAGATAAAG AATTCATAAA AAATAGAACA GAAGGCTTTG AGAAATTAAA AGAAATTATT AAAAAATATA CACCAGAATA TGCATCAAAA ATATGCGGAG TTGATAAAGA ACTGATAATT GAGAGTGCTA AAATTTATGG AAATGCTGAA AGGGCATCTA TCATATACTG CATGGGAGTA ACACAATTTA CACACGGTGT TGATGCTGTC AAGGCATTGT GTAATTTAGC CATGATAACC GGAAATATTG GTAAAGAAGG AACTGGGGTT AATCCATTAA GGGGGCAGAA TAACGTTCAA GGAGCTTGTG ATATGGGAGC TTTGCCAAAT GTATTTCCTG GGTATCAAAA GGTTGAAGAT GGCTATAAAT TATTTGAAGA GTATTGGAAA ACTGACTTGA ATCCAAATTC TGGTTTAACA ATACCAGAGA TGATAGATGA ATCTGGAAAA AATATTAAAT TCCTATACAT AATGGGAGAA AATCCAATAG TATCAGACCC GGATGTTAAG CATGTTGAAA AGGCATTAAA AAGCTTAGAT TTTTTAGTAG TTCAAGATAT ATTCTTAACT GAAACTGCAA AATTGGCAGA TGTTGTTCTT CCAGCTGCAT GTTGGGCAGA GAAGGATGGA ACTTTTACAA ACACTGAAAG GAGAGTTCAA TTAATAAGAA AAGCTGTAAA TCCACCTGGA GAGGCTTTAG AGGATTGGAT AATAATCAAA AAATTAGCTG AAAAACTTGG TTATGGAGAT AAATTTAACT ACAATAAGGT AGAGGATATA TTTAACGAGA TTAGAAAAGT TACGCCTCAA TATAGAGGCA TAACCTACAA AAGATTAAAA ATTGATGGCA TTCATTGGCC TTGTTTAGAT GAAAATCATT CAGGAACAAA AATCTTACAT AAAGATAAGT TTTTAACAGA TAACGGTAGA GGAAAGATAT TCCCAGTTGA GTATAGAGAA GTTGCAGAAC TACCAGATAA AGATTATCCT TTCATTCTAA CAACTGGAAG AATAATATTC CACTACCATA CTGGAACCAT GACAAGACGA TGCAAAAATT TAGTTGAAGA GATTAATGAA CCATTTATTG AAATAAATCC AGATGATGCC AAATCATTAA AAATTGAGAA TGGTGATTTA GTTAAGGTGA TTTCAAGGAG AGGAGAGATA ACTGCCAAAG CAAGAATAAC TGAAGACATT AAAAAAGGAG TTGTATTTAT GCCATTCCAC TTCGTTGAGG CAAATCCTAA CGTATTAACC AATACTGCGT TAGATGAGTT GTGTAAAATT CCAGAGCTTA AGGTGTGTGC TGTAAAGATT GAACGAATTT A

Product

ProductfdhA
DescriptionFormate dehydrogenase alpha subunit
Modifications521..523,aa:Sec
MHKNKNLKEL GETMEFKIVN TICPYCGVGC GLGLVVKDGR VIGIHPNKRH PINEGKLCAK GNYCYQFIHS KDRLTKPLIK KESGFVETTW NKALEVIAEN LKTYKDEIGF FSSARCTNED NYILQKFARV ALKTNNIDHC ARLUHSATVT GMSACFGSGA MTNSIEDIEL ADCILIIGSN TFEQHPLIAR RIMRAKDKGA KIIVIDPRRT ITAKNSDIYL QIIPGTNVAL INAMINVIIK ENLIDKEFIK NRTEGFEKLK EIIKKYTPEY ASKICGVDKE LIIESAKIYG NAERASIIYC MGVTQFTHGV DAVKALCNLA MITGNIGKEG TGVNPLRGQN NVQGACDMGA LPNVFPGYQK VEDGYKLFEE YWKTDLNPNS GLTIPEMIDE SGKNIKFLYI MGENPIVSDP DVKHVEKALK SLDFLVVQDI FLTETAKLAD VVLPAACWAE KDGTFTNTER RVQLIRKAVN PPGEALEDWI IIKKLAEKLG YGDKFNYNKV EDIFNEIRKV TPQYRGITYK RLKIDGIHWP CLDENHSGTK ILHKDKFLTD NGRGKIFPVE YREVAELPDK DYPFILTTGR IIFHYHTGTM TRRCKNLVEE INEPFIEINP DDAKSLKIEN GDLVKVISRR GEITAKARIT EDIKKGVVFM PFHFVEANPN VLTNTALDEL CKIPELKVCA VKIER

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