Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200107"

Accession numberr200107 [export]
Locus namefdhF
Recode1 namefdhF_s_pro_ecol
Descriptionformate dehydrogenase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEscherichia coli [details]

Sequence

GenBank IDsAE000481.1
SequenceDNA of 2148 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 418)
DescriptionSelenocysteine incorporation at UGA codon.
ATGAAAAAAG TCGTCACGGT TTGCCCCTAT TGCGCATCAG GTTGCAAAAT CAACCTGGTC GTCGATAACG GCAAAATCGT CCGGGCGGAG GCAGCGCAGG GGAAAACCAA CCAGGGTACC CTGTGTCTGA AGGGTTATTA TGGCTGGGAC TTCATTAACG ATACCCAGAT CCTGACCCCG CGCCTGAAAA CCCCCATGAT CCGTCGCCAG CGTGGCGGCA AACTCGAACC TGTTTCCTGG GATGAGGCAC TGAATTACGT TGCCGAGCGC CTGAGCGCCA TCAAAGAGAA GTACGGTCCG GATGCCATCC AGACGACCGG CTCCTCGCGT GGTACGGGTA ACGAAACCAA CTATGTAATG CAAAAATTTG CGCGCGCCGT TATTGGTACC AATAACGTTG ACTGCTGCGC TCGTGTCTGA CACGGCCCAT CGGTTGCAGG TCTGCACCAA TCGGTCGGTA ATGGCGCAAT GAGCAATGCT ATTAACGAAA TTGATAATAC CGATTTAGTG TTCGTTTTCG GGTACAACCC GGCGGATTCC CACCCAATCG TGGCGAATCA CGTAATTAAC GCTAAACGTA ACGGGGCGAA AATTATCGTC TGCGATCCGC GCAAAATTGA AACCGCGCGC ATTGCTGACA TGCACATTGC ACTGAAAAAC GGCTCGAACA TCGCGCTGTT GAATGCGATG GGCCATGTCA TTATTGAAGA AAATCTGTAC GACAAAGCGT TCGTCGCTTC ACGTACAGAA GGCTTTGAAG AGTATCGTAA AATCGTTGAA GGCTACACGC CGGAGTCGGT TGAAGATATC ACCGGCGTCA GCGCCAGTGA GATTCGTCAG GCGGCACGGA TGTATGCCCA GGCGAAAAGC GCCGCCATCC TGTGGGGCAT GGGTGTAACC CAGTTCTACC AGGGCGTGGA AACCGTGCGT TCTCTGACCA GCCTCGCGAT GCTGACCGGT AACCTCGGTA AGCCGCATGC GGGTGTTAAC CCGGTTCGTG GTCAGAACAA CGTTCAGGGT GCCTGCGATA TGGGCGCGCT GCCGGATACG TATCCGGGAT ACCAGTACGT GAAAGATCCG GCTAACCGCG AGAAATTCGC CAAAGCCTGG GGCGTGGAAA GCCTGCCAGC GCATACCGGC TATCGCATCA GCGAGCTGCC GCACCGCGCA GCGCATGGCG AAGTGCGTGC CGCGTACATT ATGGGCGAAG ATCCGCTACA AACTGACGCG GAGCTGTCGG CAGTACGTAA AGCCTTTGAA GATCTGGAAC TGGTTATCGT TCAGGACATC TTTATGACCA AAACCGCGTC GGCGGCGGAT GTTATTTTAC CGTCAACGTC GTGGGGCGAG CATGAAGGCG TGTTTACTGC GGCTGACCGT GGCTTCCAGC GTTTCTTCAA GGCGGTTGAA CCGAAATGGG ATCTGAAAAC GGACTGGCAA ATCATCAGTG AAATCGCCAC CCGTATGGGT TATCCGATGC ACTACAACAA CACCCAGGAG ATCTGGGATG AGTTGCGTCA TCTGTGCCCG GATTTCTACG GTGCGACTTA CGAGAAAATG GGCGAACTGG GCTTCATTCA GTGGCCTTGC CGCGATACTT CAGATGCCGA TCAGGGGACT TCTTATCTGT TTAAAGAGAA GTTTGATACC CCGAACGGTC TGGCGCAGTT CTTCACCTGC GACTGGGTAG CGCCAATCGA CAAACTCACC GACGAGTACC CGATGGTACT GTCAACGGTG CGTGAAGTTG GTCACTACTC TTGCCGTTCG ATGACCGGTA ACTGTGCGGC ACTGGCGGCG CTGGCTGATG AACCTGGCTA CGCACAAATC AATACCGAAG ACGCCAAACG TCTGGGTATT GAAGATGAGG CATTGGTTTG GGTGCACTCG CGTAAAGGCA AAATTATCAC CCGTGCGCAG GTCAGCGATC GTCCGAACAA AGGGGCGATT TACATGACCT ACCAGTGGTG GATTGGTGCC TGTAACGAGC TGGTTACCGA AAACTTAAGC CCGATTACGA AAACGCCGGA GTACAAATAC TGCGCCGTTC GCGTCGAGCC GATCGCCGAT CAGCGCGCCG CCGAGCAGTA CGTGATTGAC GAGTACAACA AGTTGAAAAC TCGCCTGCGC GAAGCGGCAC TGGCGTAA

Product

ProductfdhF
Descriptionselenopolypeptide subunit of formate dehydrogenase H
Modifications418..420,aa:Sec
MKKVVTVCPY CASGCKINLV VDNGKIVRAE AAQGKTNQGT LCLKGYYGWD FINDTQILTP RLKTPMIRRQ RGGKLEPVSW DEALNYVAER LSAIKEKYGP DAIQTTGSSR GTGNETNYVM QKFARAVIGT NNVDCCARVU HGPSVAGLHQ SVGNGAMSNA INEIDNTDLV FVFGYNPADS HPIVANHVIN AKRNGAKIIV CDPRKIETAR IADMHIALKN GSNIALLNAM GHVIIEENLY DKAFVASRTE GFEEYRKIVE GYTPESVEDI TGVSASEIRQ AARMYAQAKS AAILWGMGVT QFYQGVETVR SLTSLAMLTG NLGKPHAGVN PVRGQNNVQG ACDMGALPDT YPGYQYVKDP ANREKFAKAW GVESLPAHTG YRISELPHRA AHGEVRAAYI MGEDPLQTDA ELSAVRKAFE DLELVIVQDI FMTKTASAAD VILPSTSWGE HEGVFTAADR GFQRFFKAVE PKWDLKTDWQ IISEIATRMG YPMHYNNTQE IWDELRHLCP DFYGATYEKM GELGFIQWPC RDTSDADQGT SYLFKEKFDT PNGLAQFFTC DWVAPIDKLT DEYPMVLSTV REVGHYSCRS MTGNCAALAA LADEPGYAQI NTEDAKRLGI EDEALVWVHS RKGKIITRAQ VSDRPNKGAI YMTYQWWIGA CNELVTENLS PITKTPEYKY CAVRVEPIAD QRAAEQYVID EYNKLKTRLR EAALA

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