Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200111"

Accession numberr200111 [export]
Locus namefdnG
Recode1 namefdnG_s_pro_ecol
Descriptionformate dehydrogenase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEscherichia coli [details]

Sequence

GenBank IDsAE000244.1,D90789.1,D90788.1
SequenceDNA of 3048 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 586)
DescriptionSelenocysteine incorporation at UGA codon.
ATGGACGTCA GTCGCAGACA ATTTTTTAAA ATCTGCGCGG GCGGTATGGC TGGAACAACA GTAGCGGCAT TGGGCTTTGC CCCGAAGCAA GCACTGGCTC AGGCGCGAAA CTACAAATTA TTACGCGCTA AAGAGATCCG TAACACCTGC ACATACTGTT CCGTAGGTTG CGGGCTATTG ATGTATAGCC TGGGTGATGG CGCAAAAAAC GCCAGAGAAG CGATTTATCA CATTGAAGGT GACCCGGATC ATCCGGTAAG CCGTGGTGCG CTGTGCCCGA AAGGGGCCGG TTTGCTGGAT TACGTCAACA GTGAAAACCG TCTGCGCTAC CCGGAATATC GTGCGCCAGG TTCTGACAAA TGGCAGCGCA TTAGCTGGGA AGAAGCATTC TCCCGTATTG CGAAGCTGAT GAAAGCTGAC CGTGACGCTA ACTTTATTGA AAAGAACGAG CAGGGCGTAA CGGTAAACCG TTGGCTTTCT ACCGGTATGC TGTGTGCCTC CGGTGCCAGC AACGAAACCG GGATGCTGAC CCAGAAATTT GCCCGCTCCC TCGGGATGCT GGCGGTAGAC AACCAGGCGC GCGTCTGACA CGGACCAACG GTAGCAAGTC TTGCTCCAAC ATTTGGTCGC GGTGCGATGA CCAACCACTG GGTGGATATC AAAAACGCTA ACGTCGTGAT GGTGATGGGC GGTAACGCTG CTGAAGCGCA TCCCGTCGGT TTCCGCTGGG CGATGGAAGC GAAAAACAAC AACGACGCAA CCTTGATCGT TGTCGATCCC CGTTTTACGC GTACCGCTTC TGTGGCGGAT ATTTACGCGC CTATTCGTTC CGGTACGGAC ATTACGTTCC TGTCTGGCGT TTTGCGCTAC CTGATCGAAA ACAACAAAAT CAACGCCGAA TACGTTAAGC ATTACACCAA CGCCAGCCTG CTGGTGCGTG ATGATTTTGC TTTCGAAGAC GGTCTGTTCA GCGGCTACGA CGCTGAAAAA CGTCAATACG ATAAATCGTC CTGGAACTAT CAGCTCGATG AAAACGGCTA TGCGAAACGC GATGAAACAC TGACTCATCC GCGCTGTGTG TGGAACCTGC TGAAAGAGCA CGTTTCCCGC TACACGCCGG ACGTCGTTGA AAACATCTGC GGTACGCCAA AAGCCGACTT CCTGAAAGTG TGTGAAGTGC TGGCCTCCAC CAGCGCACCG GATCGCACAA CCACCTTCCT GTACGCGCTG GGCTGGACGC AGCACACTGT GGGTGCGCAG AACATCCGTA CTATGGCGAT GATCCAGTTG CTGCTCGGTA ACATGGGTAT GGCCGGTGGC GGCGTGAACG CATTGCGTGG TCACTCCAAC ATTCAGGGCT TGACTGACTT AGGCCTGCTC TCTACCAGCC TGCCAGGTTA TCTGACGCTG CCGTCAGAAA AACAGGTTGA TTTGCAGTCG TATCTGGAAG CGAACACGCC GAAAGCGACG CTGGCTGATC AGGTGAACTA CTGGAGCAAC TATCCGAAGT TCTTCGTTAG CCTGATGAAA TCTTTCTATG GCGATGCCGC GCAGAAAGAG AACAACTGGG GCTATGACTG GCTGCCGAAG TGGGACCAGA CCTACGACGT CATCAAGTAT TTCAACATGA TGGATGAAGG CAAAGTCACC GGTTATTTCT GCCAGGGCTT TAACCCGGTT GCGTCCTTCC CGGACAAAAA CAAAGTGGTG AGCTGCCTGA GCAAGCTGAA GTACATGGTG GTTATCGATC CGCTGGTGAC TGAAACCTCT ACCTTCTGGC AGAACCACGG TGAGTCGAAC GATGTCGATC CGGCGTCTAT TCAGACTGAA GTATTCCGTC TGCCTTCGAC CTGCTTTGCT GAAGAAGATG GTTCTATCGC TAACTCCGGT CGCTGGTTGC AGTGGCACTG GAAAGGTCAG GACGCGCCGG GCGAAGCGCG TAACGACGGT GAAATTCTGG CGGGTATCTA CCATCATCTG CGCGAGCTGT ACCAGTCCGA AGGTGGTAAA GGCGTAGAAC CGCTGATGAA GATGAGCTGG AACTACAAGC AGCCGCACGA ACCGCAATCT GACGAAGTGG CTAAAGAGAA CAACGGCTAC GCGCTGGAAG ATCTCTATGA CGCTAATGGC GTGCTTATTG CGAAGAAAGG TCAGTTGCTG AGTAGCTTTG CGCATCTGCG TGATGACGGT ACAACCGCAT CTTCTTGCTG GATCTACACC GGTAGCTGGA CAGAGCAGGG CAACCAGATG GCTAACCGCG ATAACTCCGA CCCGTCCGGT CTGGGGAATA CGCTGGGATG GGCCTGGGCG TGGCCGCTCA ACCGTCGCGT GCTGTACAAC CGTGCTTCGG CGGATATCAA CGGTAAACCG TGGGATCCGA AACGGATGCT GATCCAGTGG AACGGCAGCA AGTGGACGGG TAACGATATT CCTGACTTCG GCAATGCCGC ACCGGGTACG CCAACCGGGC CGTTTATCAT GCAGCCGGAA GGGATGGGAC GCCTGTTTGC CATCAACAAA ATGGCGGAAG GTCCGTTCCC GGAACACTAC GAGCCGATTG AAACGCCGCT GGGCACTAAC CCGCTGCATC CGAACGTGGT GTCTAACCCG GTTGTTCGTC TGTATGAACA AGACGCGCTG CGGATGGGTA AAAAAGAGCA GTTCCCGTAT GTGGGTACGA CCTATCGTCT GACCGAGCAC TTCCACACCT GGACCAAGCA CGCATTGCTC AACGCAATTG CTCAGCCGGA ACAGTTTGTG GAAATCAGCG AAACGCTGGC GGCGGCGAAA GGCATTAATA ATGGCGATCG TGTCACTGTC TCCAGCAAGC GTGGCTTTAT CCGCGCGGTG GCTGTGGTAA CGCGTCGTCT GAAACCGCTG AATGTAAATG GTCAGCAGGT TGAAACGGTG GGTATTCCAA TCCACTGGGG CTTTGAGGGT GTCGCGCGTA AAGGTTATAT CGCTAACACT CTGACGCCGA ATGTCGGTGA TGCAAACTCG CAAACGCCGG AATATAAAGC GTTCTTAGTC AACATCGAGA AGGCGTAA

Product

ProductfdnG
Descriptionformate dehydrogenase-N, nitrate-inducible, alpha subunit
Modifications586..588,aa:Sec
MDVSRRQFFK ICAGGMAGTT VAALGFAPKQ ALAQARNYKL LRAKEIRNTC TYCSVGCGLL MYSLGDGAKN AREAIYHIEG DPDHPVSRGA LCPKGAGLLD YVNSENRLRY PEYRAPGSDK WQRISWEEAF SRIAKLMKAD RDANFIEKNE QGVTVNRWLS TGMLCASGAS NETGMLTQKF ARSLGMLAVD NQARVUHGPT VASLAPTFGR GAMTNHWVDI KNANVVMVMG GNAAEAHPVG FRWAMEAKNN NDATLIVVDP RFTRTASVAD IYAPIRSGTD ITFLSGVLRY LIENNKINAE YVKHYTNASL LVRDDFAFED GLFSGYDAEK RQYDKSSWNY QLDENGYAKR DETLTHPRCV WNLLKEHVSR YTPDVVENIC GTPKADFLKV CEVLASTSAP DRTTTFLYAL GWTQHTVGAQ NIRTMAMIQL LLGNMGMAGG GVNALRGHSN IQGLTDLGLL STSLPGYLTL PSEKQVDLQS YLEANTPKAT LADQVNYWSN YPKFFVSLMK SFYGDAAQKE NNWGYDWLPK WDQTYDVIKY FNMMDEGKVT GYFCQGFNPV ASFPDKNKVV SCLSKLKYMV VIDPLVTETS TFWQNHGESN DVDPASIQTE VFRLPSTCFA EEDGSIANSG RWLQWHWKGQ DAPGEARNDG EILAGIYHHL RELYQSEGGK GVEPLMKMSW NYKQPHEPQS DEVAKENNGY ALEDLYDANG VLIAKKGQLL SSFAHLRDDG TTASSCWIYT GSWTEQGNQM ANRDNSDPSG LGNTLGWAWA WPLNRRVLYN RASADINGKP WDPKRMLIQW NGSKWTGNDI PDFGNAAPGT PTGPFIMQPE GMGRLFAINK MAEGPFPEHY EPIETPLGTN PLHPNVVSNP VVRLYEQDAL RMGKKEQFPY VGTTYRLTEH FHTWTKHALL NAIAQPEQFV EISETLAAAK GINNGDRVTV SSKRGFIRAV AVVTRRLKPL NVNGQQVETV GIPIHWGFEG VARKGYIANT LTPNVGDANS QTPEYKAFLV NIEKA

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