Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200117"

Accession numberr200117 [export]
Locus namefruA
Recode1 namefruA_s_arc_mjan
Descriptionhydrogenase
Recode statusValidated

Organism

Genomic classArchaea (Chromosome)
OrganismMethanocaldococcus jannaschii [details]

Sequence

GenBank IDsU67461.1
SequenceDNA of 1347 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (positions: 1156, 1231)
DescriptionSelenocysteine incorporation at UGA codon.
GTGACCAATA GAATAGAAAT TGCCCCTACA ACCAGGCATG AAGGACACGC CAAATTAATT TTAGAGGTTG ATGAGGAGGG AATTGTAAAT AAAGCATACT ATTTAAACAC AACCCCAGTT AGAGGATTCG AAACAATGTT AAAGGGCAAG CCAGCAGAGT TTGCTCCAAT AGCAGTGATG AGAATCTGTG GAATCTGTCA AACCACACAC GGAATTGCCT CCTGTGAAGC TATAGAAAAC GCTATTGACT GTGAAGTTCC AGATGATGGT TTGCTATTAA GGGAGTTAGT AGGAATTGGA AATAGATTGC ACTCCCACCC ATTACACCAC CTATTGACAA TTGACGACTT CTTAAAACCA GATGAGACAG ATTTAAAAAT TGAACTAATA AAATTAATCC AAAGAATGAG AAAGGTTGGA CAATTAGTTG TAGATATTGT AGGAGGAGAA GGAATCCACC CACCAAACAT TGTAATTGGT GGAATGAGAA CAAACATAAC AGAGAGAGCT AAATCAAGAC TATACTATGC ATTAAGACAG TATGAAAAAG ATGCCTATGA GTTGTATGAG AAATACACTG AATTAATTGA AAGATACTTA GAAGAGATTG GAATCCCAGA CTTAGGAGCT CATGAATATC CATATATAGC AACTCACACA ACATACGGAG ACAGATATGC AATAAACTGG GATGATGTAA CTGAAATTCC AGCCCAAAGA TACTACGATG ATGAAGAAGC TAAACAAACA ACAACAATCC AAATTCCTTT ATATGCTGGA GTTCCTGCTG AAGGAGGGCC AAGAGCAAGA ATGGTCAAGT TTGGTAATTT CAGAGAAGGA GGAAGTGCAA TGGATATAAA TATAGCAAGA GCTCAAGAGA ACCTTGGAGC TGTTTATAGA GCTTTAGAGA TTTTAGATGA ACTCGACTTA AACGGAAAAA CAAGAGCTGA GGTAGAATAT AAAGATGGCT TTGGAATAGG GGTTCATGAA GCTCCAAGAG CTACAAACAC ACACATGGCA GAAGTTGGAA AGGATGGAAA AATTAAGAGC TATAGAATTA TAGCGGCATC AACATGGAAC TTCCCAATTG TTGAAAAGGC AATTGAAGGC TATCCACAGC AGTATGCTGA AGTCATAATG AGAGCTTATG ATATATGAGC TTCATGTGCA ACACACGTTA TAGTTAAAGA TGAAGAGACA AAAGAGATTA TAGAAGTTAG AAAAATGTTA TAAGCCTCGA GGGGAACCCG AAAGGGACCC GAGAGGCATA ACAGGACTTT CGCAGGAATA AATATTCAAT GGAATATAGA CATCCAAAGA TGTCAAAGTT CCAAAGTGCA TATATAA

Product

ProductfruA
DescriptionF420-reducing hydrogenase subunit
Modifications1156..1158,aa:Sec|1231..1233,aa:Sec
VTNRIEIAPT TRHEGHAKLI LEVDEEGIVN KAYYLNTTPV RGFETMLKGK PAEFAPIAVM RICGICQTTH GIASCEAIEN AIDCEVPDDG LLLRELVGIG NRLHSHPLHH LLTIDDFLKP DETDLKIELI KLIQRMRKVG QLVVDIVGGE GIHPPNIVIG GMRTNITERA KSRLYYALRQ YEKDAYELYE KYTELIERYL EEIGIPDLGA HEYPYIATHT TYGDRYAINW DDVTEIPAQR YYDDEEAKQT TTIQIPLYAG VPAEGGPRAR MVKFGNFREG GSAMDINIAR AQENLGAVYR ALEILDELDL NGKTRAEVEY KDGFGIGVHE APRATNTHMA EVGKDGKIKS YRIIAASTWN FPIVEKAIEG YPQQYAEVIM RAYDIUASCA THVIVKDEET KEIIEVRKML UASRGTRKGP ERHNRTFAGI NIQWNIDIQR CQSSKVHI

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