Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200119"

Accession numberr200119 [export]
Locus namegp5B
Recode1 namegp5B_m_bac_LCBA2
Descriptioncapsid protein
Recode statusValidated

Organism

Genomic classViral Genome (Phage)
OrganismLactobacillus phage A2 [details]

Sequence

GenBank IDsNC_004112.1
SequenceDNA of 1460 nucleotides [sequence]
OrganisationStemloop (1) [see structure]

Recoding event

Event type-1 Frameshifting (position: 1,197)
Descriptionproduction of fusion protein and set the ratio between two protein products protein products
ATGACTTTAG ATGAAAAATT AGCTGCTGTT AAAAAGCAAC TTGATGAAAA GCGTTCAGCG TTGCCAGCTA TGAAGACAGA ACTTCGTTCT TTACTTGAAG GTGAAGATTC CGAGGAAAAC CTGAAGAAGG CAGAAGGCGT TCGTGCCAAG TATGATAAAG CTGGCAAAGA GATCAAAGAT CTTGAAGAAA AACGTGACTT ATACGAGGCT GCGTTGAAAG GCAATGAACA GTCGAGTGGG AAGAAGCCCG ATCATCCGGA AGAGCATAGC TATCGCGATG CACTGAATGC TTATTTGCAT ACTCGTGGTC GTAATACTGA TGGCGTCAAT TTTGAAAAGA CTGATGTTGG CACATTTGCA GTTTTACGAG CTGTTCCTAC TGATGCCAGT GATGCGGTAA ATGCCGGTGT CAAGGCTGCA GACGCGGCCT CGACCATTCC AGAAACTATT AGCAATACAC CACAGCGTGA ATTGCAGACT GTTGTTGATC TGAAACCTTT CACGAACGTA TTCCAAGCCT CTACACAAAA GGGTACTTAC CCAACAGTTG CAAATGCCAC AACCAAGATG GTCACTGTCG CCGAGTTGGA AAAGAACCCA GCAATGGCAA AACCAGAATT CAAGCCGGTC AACTGGTCTG TTGAAACGTA TCGTCAGGCG TTACCAGTAT CGCAGGAGTC AATTGACGAC TCTGCGATTG ATTTGGTTGG CCTGATTGCC CAGAACGGAC AACAGATTAA GGTCAATACG ACTAACGGTG CTGTTGCAAC TCTGCTGAAA GGCTTCACTG CCAAGACAAT CTCTAGCGTT GATGATTTGA AGCATATCAA TAACGTTGAT TTAGATCCTG CATATTCTCG TGTAATTATT GCTTCACAGA GTTTCTACAA TTTCTTGGAC ACAGTTAAAG ATGGCAATGG TCGCTACTTG CTACAAGATA GCATCTTGAC CCCGTCTGGC AAGAGCGTTC TTGGTATGCC GATTGCTGTT GTATCTGATG ATACTTTGGG TGCAGCAGGC GAAGCACACG CCTTTTTGGG TGACATCAAG CGGGCAATTC TGTTTGCTAA CCGCGCAGAC TTCATGGTTC GCTGGGTTGA TGATCAGATT TACGGCCAAT TCTTGCAAGC AGGAATGCGC TTTGGTGTAT CTGTTGCTGA CGAAAAGGCT GGCTACTTCC TCACATACAC CCCAAAAGCG TAACGCCTGA CGGAGTGACT TTGAGCCAGA AAACGCTCAC GGGTGCTGTC GGTTCCACAA AAGACATCAC GGTGACAGTC ACTCCTGATG GCGCTCCTCA AGCAGTCGAA GCTGTGTCGA GCGATGAAAG TGTCGCTACG GTTGTTAAGA AGTCCGATGG TGTTTACACC ATTACCAATC TGGCAGCGGG TGCAGCGACA ATCACATTTA GCACTAATGG CATCAGATCA ACACTTGCCG TTACTGTTAA CGCCGGGTAG

Products

Productgp5B
DescriptionCapsid protein
MTLDEKLAAV KKQLDEKRSA LPAMKTELRS LLEGEDSEEN LKKAEGVRAK YDKAGKEIKD LEEKRDLYEA ALKGNEQSSG KKPDHPEEHS YRDALNAYLH TRGRNTDGVN FEKTDVGTFA VLRAVPTDAS DAVNAGVKAA DAASTIPETI SNTPQRELQT VVDLKPFTNV FQASTQKGTY PTVANATTKM VTVAELEKNP AMAKPEFKPV NWSVETYRQA LPVSQESIDD SAIDLVGLIA QNGQQIKVNT TNGAVATLLK GFTAKTISSV DDLKHINNVD LDPAYSRVII ASQSFYNFLD TVKDGNGRYL LQDSILTPSG KSVLGMPIAV VSDDTLGAAG EAHAFLGDIK RAILFANRAD FMVRWVDDQI YGQFLQAGMR FGVSVADEKA GYFLTYTPKA
Productgp5B-orf2
DescriptionCapsid protein
Modifications1197..1197:ribosomal_frameshift
MTLDEKLAAV KKQLDEKRSA LPAMKTELRS LLEGEDSEEN LKKAEGVRAK YDKAGKEIKD LEEKRDLYEA ALKGNEQSSG KKPDHPEEHS YRDALNAYLH TRGRNTDGVN FEKTDVGTFA VLRAVPTDAS DAVNAGVKAA DAASTIPETI SNTPQRELQT VVDLKPFTNV FQASTQKGTY PTVANATTKM VTVAELEKNP AMAKPEFKPV NWSVETYRQA LPVSQESIDD SAIDLVGLIA QNGQQIKVNT TNGAVATLLK GFTAKTISSV DDLKHINNVD LDPAYSRVII ASQSFYNFLD TVKDGNGRYL LQDSILTPSG KSVLGMPIAV VSDDTLGAAG EAHAFLGDIK RAILFANRAD FMVRWVDDQI YGQFLQAGMR FGVSVADEKA GYFLTYTPKS VTPDGVTLSQ KTLTGAVGST KDITVTVTPD GAPQAVEAVS SDESVATVVK KSDGVYTITN LAAGAATITF STNGIRSTLA VTVNAG

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