Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200138"

Accession numberr200138 [export]
Locus namegrdA
Recode1 namegrdA_s_pro_cpur
Descriptionglycine reductase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium purinilyticum [details]

Sequence

GenBank IDsM64374.1,S45980.1,S45981.1
SequenceRNA of 453 nucleotides [sequence]

Recoding event

Event typeSelenocysteine (position: 127)
DescriptionSelenocysteine incorporation at UGA codon. Selenocysteine insertion sequence (SECIS) is not yet identified in gram-positive bacteria; in some selenoproteins' mRNA from gram-positive bacteria a stable stem-loop structure is predicted to form in 3'UTR. But there has been no experimental evidence presented of such case.
ATGATATTAC AAGGAAAAAA AGTTATAGCA ATAGGAGATA GAGATGGTAT TCCAGGACCA GCTATCGAAG AATGTGTAAA ATCAGCAGGA GCAGAAATTG CTTTCTCATC AACTGAATGT TTTGTCTGAA CTGCAGCAGG AGCTATGGAT CTGGAGATCC AACAAAAAGT TAAAGATGCT GCTGAGTCAA TCGGAGCAGA CAATTTAGTA GTTGTTCTTG GAGGAGCTGA AGCTGAATCA TCAGGACTAT CAGCAGAAAC AGTAACAACA GGAGACCCAA CATATGCAGG ACCTTTAGCT GGAGTAGAGC TAGGACTAAA AGTTTACCAC GTTGTAGAAG ATGAACTAAA GGCTGAATTT GATGAAGCTA TATATGAAGA TCAATGCGGA ATGATGGAAA TGGTTCTTGA CGTTGACGGA ATAAAGGAAG AAATGAATAG GGTTAGAGGA TAA

Product

ProductgrdA
Descriptionglycine reductase complex selenoprotein A
Modifications127..129,aa:Sec
MILQGKKVIA IGDRDGIPGP AIEECVKSAG AEIAFSSTEC FVUTAAGAMD LEIQQKVKDA AESIGADNLV VVLGGAEAES SGLSAETVTT GDPTYAGPLA GVELGLKVYH VVEDELKAEF DEAIYEDQCG MMEMVLDVDG IKEEMNRVRG

Publication