Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200139"

Accession numberr200139 [export]
Locus namegrdA
Recode1 namegrdA_s_pro_csti
Descriptionglycine reductase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismClostridium sticklandii [details]

Sequence

GenBank IDsM60399.1,AJ276209.1
SequenceDNA of 477 nucleotides [sequence]

Recoding event

Event typeSelenocysteine (position: 130)
DescriptionSelenocysteine incorporation at UGA codon. Selenocysteine insertion sequence (SECIS) is not yet identified in gram-positive bacteria; in some selenoproteins' mRNA from gram-positive bacteria a stable stem-loop structure is predicted to form in 3'UTR. But there has been no experimental evidence presented of such case.
ATGAGCCGTT TTACTGGAAA AAAAATAGTT ATTATCGGCG ATAGAGACGG AATTCCTGGC CCAGCTATTG AAGAATGTCT TAAGCCTATC GATTGTGAAG TTATATTTTC ATCAACAGAA TGCTTTGTCT GAACTGCTGC TGGGGCTATG GACCTAGAAA ACCAAAAGAG AATTAAAGAA GCTACTGAGA AATTCGGAGC TGAAAATCTT GTGGTTTTAA TAGGTGCTGC AGAAGCCGAA GCTGCTGGTC TAGCAGCTGA AACAGTTACA GCGGGTGACC CTACTTTTGC TGGTCCTCTT GCTGGTGTTG AGCTTGGATT AAGAGTTTAT CACGCAGTTG AGCCTGAATT CAAAGATGAA GTAGATGCTC AAATCTTTGA TGATCAAGTT GGAATGATGG AAATGGTTCT TAACGTTGAT GAAATCATAG AAGAAATGCA AAGCATTAGA AGTCAGTTTT GTAAATTTAA CGACTAA

Product

ProductgrdA
Descriptionglycine reductase complex selenoprotein A
Modifications130..132,aa:Sec
MSRFTGKKIV IIGDRDGIPG PAIEECLKPI DCEVIFSSTE CFVUTAAGAM DLENQKRIKE ATEKFGAENL VVLIGAAEAE AAGLAAETVT AGDPTFAGPL AGVELGLRVY HAVEPEFKDE VDAQIFDDQV GMMEMVLNVD EIIEEMQSIR SQFCKFND

Publication