Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200140"

Accession numberr200140 [export]
Locus namegrdA
Recode1 namegrdA_s_pro_eaci
Descriptionglycine reductase
Recode statusValidated

Organism

Genomic classBacteria (Chromosome)
OrganismEubacterium acidaminophilum [details]

Sequence

GenBank IDsY14275.1
SequenceDNA of 477 nucleotides [sequence]

Recoding event

Event typeSelenocysteine (position: 130)
DescriptionSelenocysteine incorporation at UGA codon. Selenocysteine insertion sequence (SECIS) is not yet identified in gram-positive bacteria; in some selenoproteins' mRNA from gram-positive bacteria a stable stem-loop structure is predicted to form in 3'UTR. But there has been no experimental support of such case.
ATGTCAATAT TTGACGGCAA AAAAGTCATC ATAATCGGTG ACAGAGACGG AATACCAGGT CCTGCTATGG CAGAATGTCT AAAAGGCACT GGAGCAGAAG TGGTATACTC TGCAACAGAA TGCTTTGTCT GAACAGCTGC TGGTGCAATG GACCTAGAGA ATCAGAATAG GGTTAAGAGC TTTACTGAGC AGTACGGTGC AGAGAACATG ATAGTTCTTG TTGGTGCAGC AGAAGCTGAA TCAGCAGGAC TAGCTGCAGA GACTGTTACA GCAGGAGACC CTACATTCGC AGGACCACTT GCAGGAGTCC AGTTGGGACT AAGAGTATTC CACGCAGTTG AACCGGAATT CAAGGATTCA GTAGACTCAG CAGTATACGA TGAGCAAATA GGTATGATGG AAATGGTTCT TGACGTTGAC TCGATAATAG CTGAAATGAA GTCAATAAGA GAACAGTTTG GCAAGTATAA CGATTAA

Product

ProductgrdA
Descriptionglycine reductase complex selenoprotein A
Modifications130..132,aa:Sec
MSIFDGKKVI IIGDRDGIPG PAMAECLKGT GAEVVYSATE CFVUTAAGAM DLENQNRVKS FTEQYGAENM IVLVGAAEAE SAGLAAETVT AGDPTFAGPL AGVQLGLRVF HAVEPEFKDS VDSAVYDEQI GMMEMVLDVD SIIAEMKSIR EQFGKYND

Publication