Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200145"

Accession numberr200145 [export]
Locus namehdrA
Recode1 namehdrA_s_arc_mjan
Descriptionheterodisulphide reductase
Recode statusValidated

Organism

Genomic classArchaea (Chromosome)
OrganismMethanocaldococcus jannaschii [details]

Sequence

GenBank IDsU67560.1
SequenceDNA of 2150 nucleotides [sequence]
OrganisationSECIS structure (1)

Recoding event

Event typeSelenocysteine (position: 613)
DescriptionSelenocysteine incorporation at UGA codon.
GTGATTTCTA TTCTTGGAGG TGAATCTATG TCCCCAAGAG TTGGGGTATT TGTCTGTTAC TGTGGAGCGA ACATCAACGG TGTTGTTGAT TGTGAAGCAG TAAGAGATTT TGCTGAAAAA TTAGACGGAG TTGTTGTAGC AAAGACCTAT CCTTTTATGT GTGCTGACCC AGGACAAAAC TTGATTAAAG AAGCAATAAA GGAATATAAT CTTGATAGAG TCGTTGTCGC GGCATGCACA CCAAAAATTC ACGAGCCTAC TTTTAGAAAT TGTATAAAAG AAGCAGGTTT ATCTCCATAT TACTTGGAGT TTGTCAATAT TAGGGAGCAC TGTTCATTTG TTCATATGAA TGATAGAGAA AAAGCAACTA AAAAAGCAAT GGAGTTAGTT GCAGGGGCTG TTGAAAGAGC TAAGAGATTA GAAGACGTTC CACAAAAAAT TGTAGAAGTT GATAAATCTT GCTTAATCAT TGGAGGAGGT ATCGCTGGAA TTCAGGCAGC TCTTGACTTA GGAGACCAAG GTTATAAAGT TTATTTAGTT GAGAAGGAGC CATCAATTGG AGGTAGGATG GCTCAGCTTG CTAAGACATT CCCAACTGAT GACTGTGCGC TGTGAATTTT GGCCCCAAAG ATGGTTAGCG TTGCAAACCA CCCCAATGTT GAACTCATCA CCTATGCTGA AGTTAAAAAT GTCGAAGGAT TTATTGGAAA CTTTGAAGTC ACAATAGAGA AAAAACCAAG ATACGTTGAT GAAAACATCT GTACCGGATG TGGAGCCTGT GCTGCTGTAT GTCCAATTGA AGTGCCAAAC GAATTTGACT TAGGTTTAGG AACAAGAAAA GCCATCTATG TCCCATTCGC ACAGGCAGTT CCTCTTGTCT ATACAATCGA TATGGACCAC TGTATAAGAT GTGGCTTATG TGAAAAAGCT TGTGGTCCAG GAGCTATAAG ATACGACCAA AAACCTGAAG AGATTAAGTT AAAGGTTGGA ACAATCATCT GTGCAGTTGG TTATGATGAA TTTGATGCTA CATTGAAAGA AGAGTATGGT TATGGAGTCT ATGACAACGT CATAACAACA TTAGAATTAG AAAGAATGAT TAACCCAGCA GGACCAACAG GAGGGCATGA AATAAGACCA AGTGATGGAA AGCACCCACA CAGAGTTGTA TTCATACAGT GTGTTGGTTC AAGAGATGCA AAGGTTGGAA AGCACTACTG TTCAAGAATC TGTTGTATGT TTGCTTTGAA GAATGCTCAA TTAATTAAAC AGCACGACCC AAGCACTGAA GTTTATATCT GCTACATGGA TATCAGGTCT TTTGGTAAAG GTTACGAAGA GTATTACAGA AGAGCTCAGG AGCAGTTTGG AGTTAAGTTC ATTAGAGGAA GGCCAGCTTG CATAATGGAA GATCCAGAGA CAAAGAACTT GATTGTTAGA GTAGAAGATA CATTATTGGG AGAGATTGTA GAAATTGAAG CAGATTTAGT TGTATTGTCA GCAGGATTGT CACCAAGACC AGACAATCCA AAATTGGCTA AGATGCTTGG TTTAGAGCTC AGTCCAGATG GATTCTTCAA GGAGTTGCAT CCAAAGTTAG CTCCAGTTAA TACAAAGGTC GATGGTATAG CAATTGCAGG AGTTGCTCAG GGACCAAAAG ACATTCCAGA TACCGTAGCT CAGGCTAAAG GGGCCGCAAG TGCTGTTTCA ATACCAATGG CACAAGGACA GTTTAGAATA GAGATGATAA GGGCAGTTGT TGATGAAGAT GTCTGTGGAG GATGCCAAGT TTGTGCTAAG ATGTGTCCAT ACAATGCTAT AACCTATGTT GAAAAAGATG GACACTTAGT AGCTCAAGTC AATGACGTTG CATGTAAGGG ATGCGGTTCA TGTGCTGGAG CATGTCCAAG TGGAGCAATG CAGTTGAGAT ACTATAGAGA TGAGCAAATA ATTTCATTCA TTGATGGAGT ATTAGAAGCT CACCAAAAAT TAGAAAGTTA AAAAATAATT AAAAAGCACA AGCTCTACAT TCTAATAAAA ATCTCAAAAA TATAACGGCG TAGGTTATGA GCTCAACATT GGGGGCAGAC AAAACCAGAT GAGGCACCAC TCGAAGGCAA TGCCAAAGTG GTGCTGATGG AGAGGGTAAG

Product

ProducthdrA
DescriptionHeterodisulphide reductase
Modifications613..615,aa:Sec
VISILGGESM SPRVGVFVCY CGANINGVVD CEAVRDFAEK LDGVVVAKTY PFMCADPGQN LIKEAIKEYN LDRVVVAACT PKIHEPTFRN CIKEAGLSPY YLEFVNIREH CSFVHMNDRE KATKKAMELV AGAVERAKRL EDVPQKIVEV DKSCLIIGGG IAGIQAALDL GDQGYKVYLV EKEPSIGGRM AQLAKTFPTD DCALUILAPK MVSVANHPNV ELITYAEVKN VEGFIGNFEV TIEKKPRYVD ENICTGCGAC AAVCPIEVPN EFDLGLGTRK AIYVPFAQAV PLVYTIDMDH CIRCGLCEKA CGPGAIRYDQ KPEEIKLKVG TIICAVGYDE FDATLKEEYG YGVYDNVITT LELERMINPA GPTGGHEIRP SDGKHPHRVV FIQCVGSRDA KVGKHYCSRI CCMFALKNAQ LIKQHDPSTE VYICYMDIRS FGKGYEEYYR RAQEQFGVKF IRGRPACIME DPETKNLIVR VEDTLLGEIV EIEADLVVLS AGLSPRPDNP KLAKMLGLEL SPDGFFKELH PKLAPVNTKV DGIAIAGVAQ GPKDIPDTVA QAKGAASAVS IPMAQGQFRI EMIRAVVDED VCGGCQVCAK MCPYNAITYV EKDGHLVAQV NDVACKGCGS CAGACPSGAM QLRYYRDEQI ISFIDGVLEA HQKLES

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