Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200149"

Accession numberr200149 [export]
Locus nameinsA(IS1)
Recode1 nameis_m_is_is1
Descriptiontransposase
Recode statusValidated

Organism

Genomic classBacteria (Insertion sequence)
OrganismEscherichia coli [details]

Sequence

VariantIS1
GenBank IDsAY183453.1,AE015233.1,AY123253.3
SequenceDNA of 768 nucleotides [sequence]

Recoding event

Event type-1 Frameshifting (position: 313)
DescriptionTransposase synthesis
GGTGATGCTG CCAACTTACT GATTTAGTGT ATGATGGTGT TTTTGAGGTG CTCCAGTGGC TTCTGTTTCT ATCAGCTGTC CCTCCTGTTC AGCTACTGAC GGGGTGGTGC GTAACGGCAA AAGCACCGCC GGACATCAGC GCTATCTCTG CTCTCACTGC CGTAAAACAT GGCAACTGCA GTTCACTTAC ACCGCTTCTC AACCCGGTAC GCACCAGAAA ATCATTGATA TGGCCATGAA TGGCGTTGGA TGCCGGGCAA CCGCCCGCAT TATGGGCGTT GGCCTCAACA CGATTTTCCG CCATTTAAAA AACTCAGGCC GCAGTCGGTA ACCTCGCGCA TACAGCCGGG CAGTGACGTC ATCGTCTGCG CGGAAATGGA CGAACAGTGG GGATACGTCG GGGCTAAATC GCGCCAGCGC TGGCTGTTTT ACGCGTATGA CAGGCTCCGG AAGACGGTTG TTGCGCACGT ATTCGGTGAA CGCACTATGG CGACGCTGGG GCGTCTTATG AGCCTGCTGT CACCCTTTGA CGTGGTGATA TGGATGACGG ATGGCTGGCC GCTGTATGAA TCCCGCCTGA AGGGAAAGCT GCACGTAATC AGCAAGCGAT ATACGCAGCG AATTGAGCGG CATAACCTGA ATCTGAGGCA GCACCTGGCA CGGCTGGGAC GGAAGTCGCT GTCGTTCTCA AAATCGGTGG AGCTGCATGA CAAAGTCATC GGGCATTATC TGAACATAAA ACACTATCAA TAAGTTGGAG TCATTACC

Products

ProductinsA(IS1)-orf2
DescriptionTransposase, catalyzes DNA strand-transfer reactions allowing transposition
Modifications313..313:ribosomal_frameshift
VASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA MNGVGCRATA RIMGVGLNTI FRHLKNLRPQ SVTSRIQPGS DVIVCAEMDE QWGYVGAKSR QRWLFYAYDR LRKTVVAHVF GERTMATLGR LMSLLSPFDV VIWMTDGWPL YESRLKGKLH VISKRYTQRI ERHNLNLRQH LARLGRKSLS FSKSVELHDK VIGHYLNIKH YQ
ProductinsA(IS1)
DescriptionTransposase, catalyzes DNA strand-transfer reactions allowing transposition
VASVSISCPS CSATDGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA MNGVGCRATA RIMGVGLNTI FRHLKNSGRS R

Publication