Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200160"

Accession numberr200160 [export]
Locus nameorfAB
Recode1 nameorfAB_m_is_is1222
Descriptiontransposase
Recode statusValidated

Organism

Genomic classBacteria (Insertion sequence)
OrganismEscherichia coli [details]

Sequence

VariantIS1222
GenBank IDsAY528232.1
SequenceDNA of 1121 nucleotides [sequence]
OrganisationComplex structure (1) [see structure]
Sequence (1)

Recoding event

Event type-1 Frameshifting (position: 258)
DescriptionTransposase synthesis
ATGAAGAAGC GTTTTTCCGA CGAACAGATC ATCAGTATCC TCCGCGAGGC TGAAGCCGGG GTTTCTGCCC GTGAGCTCTG CCGTAAGCAC GCCATTTCCG ACGCCACCTT TTACACCTGG CGTAAGAAGT ATGGCGGTAT GGAGGTGCCC GAGGTTAAGC GCCTGAAGTC GCTTGAGGAA GAGAACGCCA GGCTCAAGAA GCTGCTTGCC GAAGCCATGC TGGATAAGGA GGCGCTTCAG GTGGCTCTGG GGCGAAAGTA CTGACGACAG ACCAGAAGCG GGAAGCCGTG ATGTTGATGT GTGATGCGAC CGGTCTGTCG CAACGTCGTG CCTGCAGGCT TACAGGTTTG TCCCTGTCGA CCTGCCGTTA TGATGCTCAG CGTCCGGCTG CTGATGCACA TTTATCAGGG CGTATTACTG AGCTGGCGCT TGAACGCAGA CGTTTTGGTT ATCGGCGTAT CTGGCAGTTG CTGCGTAGGG AGGGCCTTCA CGTCAATCAC AAGCGGGTAT ACCGTATTTA CCACCTTAAT GGACTGAGCG TAAAACGCAG ACGACGCCGT AAAGGGCTGG CGACCGAACG GTTTCCGCTT CTTCGCCCGG ATGCGCCGAA CCTTACATGG TCGATGGATT TCGTTATGGA CGCACTGGTC AACGGTCGCA GGATCAAGTG CCTGACCTGT GTGGATGATT TCACGAAGGA GTGTCTGACG ATCACCGCTG CTTTCGGTAT TTCAGGCGTT CAGGTCACGC GTATTCTGGA CAGCATCGCG TTGTTTCGGG GCTATCCGGC GACAATAAGA ACCGATCAGG GCCCGGAATT TACCTGCCGC GCGCTCGATC AATGGGCCTT TGAGCATGGT GTGGAACTAC GGCTTATCCA GCCAGGTAAG CCAACGCAGA ACGGATTTAT TGAGAGTTTT AACGGACGCT TTCGCGATGA GTGTCTGAAC GAACACTGGT TCAGCGATAT CGTTCACGCC AGGAAAACCA TTAACGACTG GAGGCAGGAT TATAACGAGT GTCGTCCACA TTCGGCACTG AATTATCAGG CGCCGTCTGA ATTTGCAGCA CGGTGGCGAA ATGGAAAATG TGAAGGTAAA CAAACCGACA TTACTAACTG A

Products

ProductorfAB(IS1222)
DescriptionTransposase, catalyzes DNA strand-transfer reactions allowing transposition
MKKRFSDEQI ISILREAEAG VSARELCRKH AISDATFYTW RKKYGGMEVP EVKRLKSLEE ENARLKKLLA EAMLDKEALQ VALGRKY
ProductorfB(IS1222)
DescriptionTransposase, catalyzes DNA strand-transfer reactions allowing transposition
Modifications258..258:ribosomal_frameshift
MKKRFSDEQI ISILREAEAG VSARELCRKH AISDATFYTW RKKYGGMEVP EVKRLKSLEE ENARLKKLLA EAMLDKEALQ VALGRKVLTT DQKREAVMLM CDATGLSQRR ACRLTGLSLS TCRYDAQRPA ADAHLSGRIT ELALERRRFG YRRIWQLLRR EGLHVNHKRV YRIYHLNGLS VKRRRRRKGL ATERFPLLRP DAPNLTWSMD FVMDALVNGR RIKCLTCVDD FTKECLTITA AFGISGVQVT RILDSIALFR GYPATIRTDQ GPEFTCRALD QWAFEHGVEL RLIQPGKPTQ NGFIESFNGR FRDECLNEHW FSDIVHARKT INDWRQDYNE CRPHSALNYQ APSEFAARWR NGKCEGKQTD ITN

Publication