Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200181"

Accession numberr200181 [export]
Locus namegag-pol
Recode1 namepol_m_tra_iap
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classEukaryota (Transposable element)
OrganismMus musculus [details]

Sequence

VariantA-type particle IAP
GenBank IDsM17551.1
SequenceDNA of 4415 nucleotides [sequence]

Recoding event

Event type-1 Frameshifting (position: 2,856)
Descriptionproduction of fusion protein and set the ratio between two protein products
GTTTTCTCTC TCTCTTGCTT CTTACACTCT TGCTCCTGAA GATGTAAGCA ATAAAGTTTT GCCGCAGAAG ATTCTGGTCT GTGGTGTTCT TCCTGGCCGG GCGTGAGAAC GCGTCTAATA ACAATTGGTG ACCGAATTCC GGGACGAGAA AAAACTCGGG ACTGGCGCAA GGAAGATCCC TCATTCCAGA ACCAGAACTG CGGGTCGCGG TAATAAAGGT TCCCGTAAAG CAGACTGTTA AGAAGGATTC AACTGTATGA ATTCAGAACT TTTCAGCTGG GGAACGAGAG TACCAGTGAG TACAGCTTTA CGAGGTAAGT CTGATCTTGA ACTTTCTAAG GAAATTCAAG ACAGTCTATC AGAAGTAAAG TGGAGAAAAT GTTTGGCCTT GAATTTTTTC TAGTGTTAGA AGCCCTTTTG TTCCTTTTCA CATGTTATCA AGTGGTTAAG GCAGGGCGGA TTCTAGATGA AATTCAGGAC AAGCTATCAG AAGTAAAGCG GGGAGAGAGA GTAGGAACAA AGAGGAAATA TGGTACACAA AATAAGTATA CAGGCCTTTC CAAGGGTCTT GAACCCGAGG AAAAGTTAAG GTTAGGTAGG AATACCTGGA GAGAGATTAG AAGAAAAAGA GGAAAAAGGG AAAAGAAGAA AGATCAATTA GCGGAGGTCT CTAGGAAAAG GAGCCTGTGC TCATCGCTGG ATGGGCTCGG GGAGCCAGCT CTTAGTAGCT CTGAAGCAGA TGAAGAATTC TCCTCTGAAG AAACAGACTG GGAGGAAGAA GCAGCTCATT ATGAGAAAAA AGGGTACCAG CCAGGTAAAG TGCTAGCTAA TCAGTTAAGG AAGCCAAAAG CGGCTGGCGA AGGCCAGTTT GCTGATTGGC CTCAGGGCAG TCGGCTTCAA GGTCCGCCCT ATGCGGAGTC CCCGCCCTGC GTAGTGCGTC AGCCCTGCGC AGAGAGGCAG TGCGCAAAGA GGCAGTGCGC AGACTCATTC ATTCCCAGAG AGGAACAAAG GAAAATACAA CAGGCATTTC CGGTCTTTGA AGGAGCCGAG GGTGGGCGTG TCCACGCTCC GGTAGAATAC TTACAAATTA AAGAGCTTGC CGAGTCGGTC CGTAAATACG GAACCAATGC TAATTTTACC TTGGTGCAGT TAGACAGGCT CGCCGGCATG GCACTAACTC CTGCTGACTG GCAAACGGTT GTAAAAGCCG CTCTCCCTAT GATGGGCAAA TATATGGAAT GGAGAGCTCT TTGGCATGAA ACTGCACAAG CGCAGGCCCG AGCAAACGCA GCTGCTTTGA CTCCAGAGCA GAGAGATTGG ACTTTTGACT TGTTAACGGG TCAGGGAGCT TATTCTGCTG ATCAAACAAA CTACCATTGG GGAGCTTATG CCCAGATTTC TTCCACGGCT ATTAGGCGCT GGAAGGGCCT CTCCCGAGCA GGTGAAACCA CTGGTCAATT AACAAAAGTT GTCCAGGGAC CTCAGGAATC CTTCTCAGAT TTTGTGGCCA GAATGACAGA GGCAGCAGAG CGTATTTTTG GAGAGTCAGA GCAAGCTGCG CCTCTCATAG AACAGCTAAT CTATGAGCAA GCCACAAAGG AGTGCCGAGC GGCCATAGCC CCAAGAAAGA ACAAAGGCTT ACAAGACTGG CTCAGGGTCT GTCGAGAGCT TGGGGGACCT CTCACCAATG CAGGCTTAGC GGCCGCCATC CTCCAATCTC AGAACCGCTC CATGAGCAGA AATGATCAGA GGACATGTTT TAATTGCGGA AAGCCTGGGC ATTTTAAGAA AGATTGCAGA GCTCCAGATA AACAGGGAGG GACTCTCACT CTTTGCTCTA AGTGTGGCAA GGGTTATCAT AGAGCTGACC AGTGTCGCTC TGTGAGGGAT ATAAAGGGCA GAGTCCTTCC CCCACCTGAT AGTCAATCAG CTTATGTGCC AAAAAACGGG TCATCGGGCC CTCGGTCCCA GGGCCTCAAA GATATGGGAA CCGGTTTGTC AGGACCCAGG AAGCAGTCAG AGAGGCGACC CAGGAAGACC CACAAGGTGG ACCTGCGTGC CGCCTCCGAC TTCCTATTAA TGCCTCAAAT GAGTATTCAG CCGGTGCCAG TGGAGCCTAT ACCATCCTTG CCCCTGGGAA CCATGGGCCT TATTCTCGGC CGGGGTTCAG CTTCTACCTT GCAGGGCTTA GTAGTCCACC CTGAGTTATG GATTGTCAAC ATTCCCCAGA AATACCAGGT CCTGTGCTCA AGCCCTAAGG GCGTTTTTTC TATTAGTAAA GGAGATAGGA TACCTCAGCT GCTGCTGCTC CTCCCTGATA ATACCAGGGA GAAATCTGCA GGACCTGAGA TAAAGAAAAT GGGCTCCTCA GGAAATGATT CTGCCTATTT GGTTGTATCT TTAAATGATA GACCTAAGCT CCGCCTTAAG ATCAACGGAA AAGAGTTTGA AGGCATCCTT GATACCGGAG CAGATAAAAG TATAATTTCT ACACATTGGT GGCCCAAAGC ATGGCCCACC ACAGAGTCAT CTCATTCATT ACAGGGCCTA GGATATCAAT CATGTCCCAC TATAAGCTCC GTTGCCTTGA CGTGGGAATC CTCTGAAGGA CAGCAAGGGA AATTCATACC TTATGTGCTC CCACTCCCGG TTAACCTCTG GGGAAGGGAT ATTATGCAGC ATTTGGGCCT TATTTTGTCC AATGAAAACG CCCCATCGGG AGGGTATTCA GCTAAAGCAA AAAATATCAT GGCAAAGATG GGTTATAAAG AAGGAAAAGG GTTAGGACAT CAAGAACAGG GAAGGATAGA GCCCATCTCA CCTAATGGAA ACCAAGACAG ACAGGGTCTG GGTTTTCCTT AGCGGCCATT GGGGCAGCAC GACCCATACC ATGGAAAACA GGGGACCCAG TGTGGGTTCC TCAATGGCAC CTATCCTCTG AAAAACTAGA AGCTGTGATT CAACTGGTAG AGGAACAATT AAAATTAGGC CATATTGACC CTTCTACCTC ACCTTGGAAT ACTCCAATTT TTGTAATTAA GAAAAAGTCA GGAAAGTGGA GACTGCTCCA TGACCTCAGA CCCATTAATG AGCAAATGAA CTTATTTGGC CCAGTACAGA GGGGTCTCCC TGTACTTTCC GCCTTACCAC GTGGCTGGAA TTTAATTATT ATAGATATTA AAGATTGTTT CTTTTCTATA CCTTTGTGTC CAAGAGATAG GCCCAGATTT GCCTTTACCA TCCCCTCTAT TAACTCAGAT GAACCTGATA ACAGGTATCA ATGGAAGGTC TTACCACAGG GAATGTCCAA TAGTCCTACA ATGTGCCAAC TTTATGTGCA AGAAGCTCTT TTGCCAGTGA GGGAACAATT CCCCTCTTTA ATTTTGCTCC TTTACATGGA TGACATCCTC CTGTGCCATA AAGAACTCAC CATGCTACAA AAGGCATATC CTTTTCTACT TAAAACTTTA AGTCAGTGGG GTCTACAGAT AGCCACAGAA AAGGTCCAAA TTTCTGATAC AGGACAATTC TTGGGCTCTG TGGTGTCCCC AGATAAGATT GTGCCCCAAA AGGTAGAGAT AAGAAGAGAT CACCTCCATA CCTTAAATAA TTTTCAAAAG CTGTTGGGAG ATATTAATTG GCTCAGACCT TTTTTAAAGA TTCCTTCCGC TGAGTTAAGG CCTTTGTTTT GGTATTTAGA AGGAGATCCT CATATCTCCT CCCCTAGGAC TCTTACTCTA GCTGCTAACC AGGCCTTACA AAAAGTGGAA AAGGCCTTAC AGAATGCACA ATTACAAGCT ATTGAGGATT CGCAACCTTT CAGTTTGTGT GTCTTTAAGA CAGCACAATT GCCAACCGCA GTTTTGTGGC AGAATGGGCC ATTGTTGTGG ATCCATCCAA ACGTATCCCC AGCTAAAATA ATAGATTGGT ATCCTGATGC AATTGCACAG CTTGCCCTTA AAGGTCTAAA AGCAGCAATC ACCCACTTTG GGCGAAGTCC ATATCTTTTA ATTGTACCTT ATACCGCTGC ACAGGTTCAA ACCTTGGCAG CCACATCTAA TGATTGGGCA GTTTTAGTTA CCTCCTTTTC AGGAAAAATA GATAACCATT ATCCAAAACA TCCAATCTTA CAGTTTGCCC AAAATCAATC TGTTGTGTTT CCACAAATAA CAGTAAGAAA CCCACTTAAA AATGGGATTG TGGTATATAC TGATGGATCA AAAACTGGCA TAGGTGCCTA TGTGGCTAAT GGTAAAGTGG TATCCAAACA ATATAATGAA AATTCACCTC GAATGGTAGA ATGTTTAGTG GTCTTAGAAG TTTTAAAAAC CTTTTTAGAA CCCCTTAATA TTGTGTCAGA TTCCTGTTAT GTGGTTAATG CAGTAAATCT TTTAGAAGGT GGCTGGAGTG ATTAA

Products

Productgag
DescriptionGag capsid polyprotein
MFGLEFFLVL EALLFLFTCY QVVKAGRILD EIQDKLSEVK RGERVGTKRK YGTQNKYTGL SKGLEPEEKL RLGRNTWREI RRKRGKREKK KDQLAEVSRK RSLCSSLDGL GEPALSSSEA DEEFSSEETD WEEEAAHYEK KGYQPGKVLA NQLRKPKAAG EGQFADWPQG SRLQGPPYAE SPPCVVRQPC AERQCAKRQC ADSFIPREEQ RKIQQAFPVF EGAEGGRVHA PVEYLQIKEL AESVRKYGTN ANFTLVQLDR LAGMALTPAD WQTVVKAALP MMGKYMEWRA LWHETAQAQA RANAAALTPE QRDWTFDLLT GQGAYSADQT NYHWGAYAQI SSTAIRRWKG LSRAGETTGQ LTKVVQGPQE SFSDFVARMT EAAERIFGES EQAAPLIEQL IYEQATKECR AAIAPRKNKG LQDWLRVCRE LGGPLTNAGL AAAILQSQNR SMSRNDQRTC FNCGKPGHFK KDCRAPDKQG GTLTLCSKCG KGYHRADQCR SVRDIKGRVL PPPDSQSAYV PKNGSSGPRS QGLKDMGTGL SGPRKQSERR PRKTHKVDLR AASDFLLMPQ MSIQPVPVEP IPSLPLGTMG LILGRGSAST LQGLVVHPEL WIVNIPQKYQ VLCSSPKGVF SISKGDRIPQ LLLLLPDNTR EKSAGPEIKK MGSSGNDSAY LVVSLNDRPK LRLKINGKEF EGILDTGADK SIISTHWWPK AWPTTESSHS LQGLGYQSCP TISSVALTWE SSEGQQGKFI PYVLPLPVNL WGRDIMQHLG LILSNENAPS GGYSAKAKNI MAKMGYKEGK GLGHQEQGRI EPISPNGNQD RQGLGFP
Productgag-pol
DescriptionGag capsid polyprotein, RNA polymerase
Modifications2856..2856:ribosomal_frameshift
MFGLEFFLVL EALLFLFTCY QVVKAGRILD EIQDKLSEVK RGERVGTKRK YGTQNKYTGL SKGLEPEEKL RLGRNTWREI RRKRGKREKK KDQLAEVSRK RSLCSSLDGL GEPALSSSEA DEEFSSEETD WEEEAAHYEK KGYQPGKVLA NQLRKPKAAG EGQFADWPQG SRLQGPPYAE SPPCVVRQPC AERQCAKRQC ADSFIPREEQ RKIQQAFPVF EGAEGGRVHA PVEYLQIKEL AESVRKYGTN ANFTLVQLDR LAGMALTPAD WQTVVKAALP MMGKYMEWRA LWHETAQAQA RANAAALTPE QRDWTFDLLT GQGAYSADQT NYHWGAYAQI SSTAIRRWKG LSRAGETTGQ LTKVVQGPQE SFSDFVARMT EAAERIFGES EQAAPLIEQL IYEQATKECR AAIAPRKNKG LQDWLRVCRE LGGPLTNAGL AAAILQSQNR SMSRNDQRTC FNCGKPGHFK KDCRAPDKQG GTLTLCSKCG KGYHRADQCR SVRDIKGRVL PPPDSQSAYV PKNGSSGPRS QGLKDMGTGL SGPRKQSERR PRKTHKVDLR AASDFLLMPQ MSIQPVPVEP IPSLPLGTMG LILGRGSAST LQGLVVHPEL WIVNIPQKYQ VLCSSPKGVF SISKGDRIPQ LLLLLPDNTR EKSAGPEIKK MGSSGNDSAY LVVSLNDRPK LRLKINGKEF EGILDTGADK SIISTHWWPK AWPTTESSHS LQGLGYQSCP TISSVALTWE SSEGQQGKFI PYVLPLPVNL WGRDIMQHLG LILSNENAPS GGYSAKAKNI MAKMGYKEGK GLGHQEQGRI EPISPNGNQD RQGLGFSLAA IGAARPIPWK TGDPVWVPQW HLSSEKLEAV IQLVEEQLKL GHIDPSTSPW NTPIFVIKKK SGKWRLLHDL RPINEQMNLF GPVQRGLPVL SALPRGWNLI IIDIKDCFFS IPLCPRDRPR FAFTIPSINS DEPDNRYQWK VLPQGMSNSP TMCQLYVQEA LLPVREQFPS LILLLYMDDI LLCHKELTML QKAYPFLLKT LSQWGLQIAT EKVQISDTGQ FLGSVVSPDK IVPQKVEIRR DHLHTLNNFQ KLLGDINWLR PFLKIPSAEL RPLFWYLEGD PHISSPRTLT LAANQALQKV EKALQNAQLQ AIEDSQPFSL CVFKTAQLPT AVLWQNGPLL WIHPNVSPAK IIDWYPDAIA QLALKGLKAA ITHFGRSPYL LIVPYTAAQV QTLAATSNDW AVLVTSFSGK IDNHYPKHPI LQFAQNQSVV FPQITVRNPL KNGIVVYTDG SKTGIGAYVA NGKVVSKQYN ENSPRMVECL VVLEVLKTFL EPLNIVSDSC YVVNAVNLLE GGWSD

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