Recode v. 2.0 / Database of translational recoding events.
Details for "r200203"
| Accession number | r200203 [export] |
| Locus name | gag-pol |
| Recode1 name | pol_m_vir_hcv |
| Description | viral or mobile polyprotein |
| Recode status | Validated |
Organism
| Genomic class | Viral Genome (Virus) |
| Organism | Human coronavirus 229E [details] |
| Acronym | HCoV-229E |
Sequence
| GenBank IDs | X69721.1 |
| Sequence | mRNA of 20568 nucleotides [sequence] |
| Organisation | Pseudoknot (1) [see structure]
|
Recoding event
| Event type | -1 Frameshifting (position: 12,520) |
| Description | production of fusion protein and set the ratio between two protein products. this is the part of the mRNA; pseudoknot structure is indeed kissing loop structure |
ACTTAAGTAC CTTATCTATC TACAGATAGA AAAGTTGCTT TTTAGACTTT GTGTCTACTT TTCTCAACTA
AACGAAATTT TTGCTATGGC CGGCATCTTT GATGCTGGAG TCGTAGTGTA ATTGAAATTT CATTTGGGTT
GCAACAGTTT GGAAGCAAGT GCTGTGTGTC CTAGTCTAAG GGTTTCGTGT TCCGTCACGA GATTCCATTC
TACAAACGCC TTACTCGAGG TTCCGTCTCG TGTTTGTGTG GAAGCAAAGT TCTGTCTTTG TGGAAACCAG
TAACTGTTCC TAATGGCCTG CAACCGTGTG ACACTTGCCG TAGCAAGTGA TTCTGAAATT TCTGCAAATG
GCTGTTCTAC TATTGCGCAA GCCGTCCGCC GTTATAGCGA GGCCGCTAGC AATGGTTTTA GGGCATGCCG
ATTTGTTTCA TTAGATTTGC AGGATTGCAT CGTTGGCATT GCAGACGATA CATATGTTAT GGGTCTGCAT
GGCAATCAGA CGTTGTTTTG CAACATAATG AAATTTTCTG ACCGTCCTTT TATGCTTCAT GGGTGGTTGG
TTTTTTCCAA TTCAAATTAC CTTTTGGAGG AATTTGATGT TGTCTTCGGT AAGAGAGGTG GTGGTAATGT
GACATACACT GACCAGTATC TCTGTGGCGC CGATGGCAAA CCTGTTATGA GTGAAGATTT ATGGCAGTTT
GTTGACCATT TCGGTGAGAA CGAAGAAATT ATCATCAATG GTCATACTTA CGTTTGTGCT TGGCTTACTA
AGCGTAAGCC CTTAGATTAC AAACGTCAGA ACAACCTTGC CATTGAAGAG ATTGAATATG TGCATGGTGA
TGCTTTGCAT ACACTACGCA ATGGTTCTGT TCTTGAAATG GCTAAGGAAG TGAAGACATC TAGTAAAGTT
GTGTTAAGCG ATGCTCTTGA CAAACTTTAC AAAGTCTTTG GTTCTCCTGT TATGACAAAT GGTTCCAACA
TCCTAGAGGC CTTTACTAAA CCTGTGTTTA TTAGTGCATT AGTTCAATGT ACTTGTGGTA CCAAGTCTTG
GTCTGTTGGT GATTGGACCG GTTTTAAATC CTCTTGTTGC AACGTGATCA GTAATAAACT GTGTGTTGTT
CCCGGTAATG TTAAACCTGG TGATGCTGTG ATTACCACTC AGCAAGCTGG TGCTGGTATT AAGTATTTTT
GTGGCATGAC TCTTAAGTTT GTTGCAAATA TTGAAGGTGT CTCTGTTTGG AGAGTGATTG CTCTTCAGAG
TGTGGATTGC TTTGTTGCTT CTTCCACTTT TGTAGAAGAG GAACATGTTA ATAGAATGGA TACATTCTGC
TTCAATGTAC GCAATAGTGT TACTGATGAG TGTCGTCTGG CCATGTTGGG TGCTGAAATG ACTAGTAATG
TCAGAAGACA AGTTGCTTCA GGTGTCATAG ACATTAGTAC CGGTTGGTTT GATGTTTATG ATGACATCTT
TGCTGAAAGC AAACCATGGT TTGTTCGCAA GGCTGAAGAC ATTTTTGGCC CTTGTTGGTC CGCTCTTGCT
TCTGCACTTA AACAACTTAA AGTCACTACA GGTGAACTTG TGAGATTTGT TAAGTCTATT TGCAATTCAG
CTGTTGCTGT CGTGGGTGGT ACTATACAAA TTCTCGCTAG TGTGCCTGAG AAGTTTTTGA ATGCGTTTGA
CGTGTTTGTC ACAGCTATTC AAACTGTCTT TGACTGTGCT GTTGAAACTT GTACTATTGC CGGTAAAGCA
TTTGACAAGG TTTTTGACTA TGTCTTGCTT GATAATGCGC TTGTAAAACT TGTCACCACA AAGCTTAAGG
GTGTTCGTGA ACGTGGCCTT AATAAAGTTA AGTATGCAAC AGTTGTTGTT GGTTCCACTG AAGAAGTTAA
ATCTTCACGT GTTGAACGTA GCACTGCTGT ACTTACAATC GCCAACAATT ATTCCAAACT TTTTGATGAA
GGGTATACTG TTGTAATTGG CGATGTGGCG TACTTTGTTA GTGACGGCTA CTTCCGTCTT ATGGCCAGTC
CAAATAGTGT GTTGACTACT GCAGTCTATA AACCATTGTT TGCTTTTAAT GTGAATGTTA TGGGTACTAG
ACCTGAAAAA TTTCCAACCA CTGTGACTTG TGAAAATTTA GAGTCTGCTG TTTTGTTTGT TAATGACAAA
ATTACTGAAT TCCAATTGGA TTACAGTATT GATGTCATTG ATAATGAAAT AATTGTCAAA CCTAATATCA
GCCTATGTGT TCCACTTTAT GTGAGAGACT ATGTTGACAA ATGGGATGAT TTTTGCAGAC AATATAGTAA
CGAGTCTTGG TTTGAGGATG ATTACAGGGC TTTTATCAGT GTTTTGGACA TCACTGATGC TGCTGTGAAA
GCTGCAGAGT CTAAAGCTTT CGTTGATACT ATTGTTCCAC CTTGCCCATC TATTTTGAAA GTTATAGATG
GAGGCAAAAT ATGGAATGGT GTTATTAAAA ATGTTAACTC TGTTAGAGAC TGGCTTAAGT CTTTGAAGTT
AAATCTCACA CAACAGGGTT TGCTTGGAAC ATGTGCAAAG CGTTTTAAAC GTTGGCTTGG CATTTTGCTA
GAGGCCTATA ATGCGTTTTT AGACACTGTG GTTTCTACTG TTAAAATTGG TGGCTTGACC TTTAAAACAT
ATGCTTTTGA TAAACCTTAC ATTGTGATAC GTGATATCGT GTGTAAGGTT GAAAATAAAA CAGAAGCAGA
ATGGATTGAG CTTTTTCCAC ATAATGACAG GATTAAGTCT TTTAGTACTT TCGAGAGTGC TTACATGCCA
ATTGCAGACC CTACACATTT TGACATTGAA GAAGTTGAAC TTTTAGATGC AGAGTTTGTA GAACCAGGCT
GTGGTGGTAT TTTGGCAGTA ATAGATGAGC ACGTCTTTTA TAAGAAGGAT GGTGTTTATT ATCCATCAAA
TGGTACTAAC ATTCTACCTG TTGCATTTAC AAAAGCCGCT GGTGGTAAAG TTTCATTTTC TGATGACGTT
GAAGTAAAAG ACATTGAACC TGTTTACAGA GTCAAGCTTT GCTTTGAGTT TGAAGATGAA AAACTTGTAG
ATGTTTGTGA AAAGGCAATT GGCAAGAAAA TTAAACATGA AGGTGACTGG GATAGCTTTT GTAAGACTAT
TCAATCAGCA CTTTCTGTTG TTTCTTGCTA TGTAAATCTA CCTACTTATT ACATTTATGA TGAAGAAGGC
GGTAATGACT TGAGTTTGCC CGTTATGATT TCTGAATGGC CTCTTTCTGT TCAACAAGCT CAACAAGAAG
CTACTTTACC TGATATTGCT GAGGATGTTG TTGACCAAGT TGAAGAAGTC AATAGCATTT TTGACATTGA
GACAGTGGAT GTTAAACATG ATGTGAGTCC TTTTGAAATG CCATTTGAAG AGTTAAATGG TTTAAAGATA
CTCAAACAAT TGGATAACAA CTGCTGGGTT AACTCAGTTA TGTTACAAAT ACAATTAACT GGTATACTTG
ATGGTGACTA TGCTATGCAG TTTTTTAAAA TGGGCCGAGT TGCCAAGATG ATTGAACGCT GCTACACTGC
TGAGCAATGT ATACGTGGTG CTATGGGTGA TGTTGGTTTG TGTATGTATA GACTGCTTAA AGACTTACAC
ACTGGTTTTA TGGTTATGGA TTATAAATGT AGTTGTACCA GTGGTAGGCT TGAAGAATCG GGAGCTGTTT
TGTTTTGTAC GCCCACTAAG AAGGCGTTTC CTTATGGTAC TTGTCTAAAT TGTAACGCAC CTCGCATGTG
TACAATTAGG CAGTTACAAG GTACCATAAT ATTTGTGCAA CAAAAACCAG AACCTGTTAA TCCTGTTTCT
TTTGTTGTTA AACCAGTCTG CTCATCAATT TTTCGTGGTG CTGTGTCTTG TGGTCATTAC CAGACTAACA
TCTATTCACA AAATTTGTGT GTGGATGGTT TTGGTGTTAA CAAGATTCAG CCCTGGACAA ATGATGCACT
TAATACTATT TGTATTAAGG ATGCAGATTA TAATGCAAAA GTTGAAATAT CTGTTACACC AATTAAAAAT
ACAGTTGATA CAACACCTAA GGAAGAATTT GTTGTTAAAG AGAAGTTGAA CGCCTTCCTC GTTCATGACA
ATGTAGCTTT CTACCAAGGT GATGTTGATA CTGTTGTTAA TGGTGTTGAC TTTGACTTTA TTGTAAATGC
TGCTAATGAG AACCTTGCTC ATGGTGGAGG ACTTGCCAAA GCTTTAGATG TGTACACTAA AGGTAAACTT
CAACGTTTAT CTAAAGAACA CATTGGATTA GCGGGTAAAG TAAAAGTTGG TACAGGAGTT ATGGTTGAGT
GTGATAGCCT TAGAATTTTT AATGTTGTTG GTCCACGCAA GGGTAAACAT GAACGTGATT TACTCATAAA
AGCTTACAAC ACTATTAATA ATGAACAAGG CACACCTTTA ACACCAATTT TGAGCTGTGG TATTTTTGGT
ATCAAACTCG AAACTTCATT AGAAGTTTTG CTTGATGTTT GTAATACAAA AGAAGTTAAA GTTTTTGTTT
ATACAGACAC AGAGGTTTGT AAGGTTAAGG ATTTTGTGTC TGGTTTAGTG AATGTTCAAA AAGTTGAGCA
ACCTAAAATA GAACCAAAAC CAGTGTCCGT AATTAAAGTT GCACCCAAGC CTTACAGGGT AGATGGTAAA
TTTAGTTACT TTACAGAAGA CTTGTTGTGT GTCGCTGATG ACAAACCCAT TGTTTTGTTT ACTGACTCTA
TGCTTACTTT GGATGACCGT GGTTTAGCTC TAGACAATGC ACTTAGTGGT GTGCTTAGTG CTGCTATTAA
GGATTGTGTT GACATAAATA AAGCTATACC TTCTGGTAAT CTTATTAAGT TTGATATAGG TTCTGTTGTT
GTCTACATGT GTGTTGTGCC ATCCGAAAAG GACAAACATT TAGATAATAA TGTTCAACGA TGCACACGTA
AGTTGAATAG ACTTATGTGT GATATAGTTT GTACTATACC AGCTGACTAC ATCTTGCCAT TGGTGTTGTC
TAGTTTGACT TGTAATGTTT CTTTTGTAGG TGAACTTAAA GCTGCTGAAG CTAAAGTTAT AACTATAAAG
GTGACAGAGG ATGGTGTTAA TGTTCATGAT GTGACCGTGA CAACAGACAA GTCATTTGAA CAACAAGTTG
GTGTTATTGC TGATAAGGAC AAAGATCTTT CTGGTGCAGT ACCAAGTGAT CTTAACACAT CTGAATTGCT
TACTAAAGCA ATAGATGTTG ATTGGGTCGA ATTTTATGGC TTTAAAGATG CTGTTACTTT TGCAACAGTT
GATCATAGTG CTTTTGCCTA TGAAAGTGCT GTTGTTAATG GTATTAGAGT GTTAAAAACT AGTGATAATA
ATTGTTGGGT GAATGCTGTT TGTATTGCAC TACAGTATTC GAAACCCCAT TTTATTTCAC AAGGTCTTGA
TGCTGCGTGG AATAAATTTG TTTTAGGCGA TGTTGAAATT TTTGTTGCAT TTGTTTACTA TGTTGCAAGA
CTAATGAAAG GTGACAAGGG TGATGCTGAA GACACTTTGA CTAAGTTGTC TAAGTATCTT GCTAATGAAG
CTCAAGTTCA ATTAGAACAT TATAGTTCTT GTGTTGAATG TGATGCTAAA TTTAAAAACT CTGTTGCATC
TATCAATTCT GCTATAGTTT GTGCTAGTGT CAAACGTGAT GGTGTGCAAG TTGGTTATTG TGTCCATGGT
ATTAAGTACT ATTCACGTGT TAGAAGTGTT AGAGGTAGAG CTATTATAGT CAGTGTCGAA CAGCTTGAAC
CGTGTGCTCA GTCTAGACTT TTGAGTGGTG TTGCTTATAC TGCTTTTTCT GGACCTGTTG ACAAAGGTCA
TTATACTGTT TATGATACTG CAAAGAAATC AATGTATGAT GGTGATCGTT TTGTTAAACA TGATCTTTCT
CTGCTGTCTG TCACATCAGT TGTTATGGTT GGTGGTTATG TTGCACCTGT TAATACAGTG AAACCTAAAC
CAGTCATTAA TCAACTTGAT GAAAAGGCAC AGAAGTTCTT TGATTTTGGT GATTTTTTGA TTCATAATTT
TGTTATTTTT TTCACATGGT TATTGAGTAT GTTTACTTTG TGTAAAACTG CAGTAACTAC AGGTGATGTT
AAAATAATGG CCAAAGCACC ACAAAGGACG GGTGTTGTTT TAAAACGTAG TCTTAAATAT AACTTAAAAG
CGTCACAGGC TGTTCTTAAA TCTAAGTGGT GGCTGCTTGC TAAGTTTACG AAACTACTGT TACTCATATA
TACATTGTAC TCAGTAGTTT TGCTTTGTGT ACGTTTTGGA CCGTTTAATT TTTGTAGTGA GACTGTTAAT
GGTTATGCTA AGTCAAACTT TGTCAAGGAT GATTACTGTG ATGGTTCATT GGGCTGCAAG ATGTGTCTTT
TTGGTTACCA AGAGTTAAGT CAATTTAGCC ATTTGGATGT TGTGTGGAAG CATATAACAG ACCCTTTGTT
TAGTAATATG CAACCTTTCA TTGTCATGGT TTTGCTGCTT ATATTTGGTG ACAATTATTT GAGATGCTTC
TTGCTGTATT TTGTTGCTCA GATGATAAGC ACAGTTGGTG TTTTTCTAGG TTACAAGGAA ACAAATTGGT
TCTTGCACTT TATTCCATTT GATGTTATTT GTGATGAACT GCTTGTCACT GTTATTGTTA TTAAGGTTAT
TTCTTTTGTC AGACATGTGC TTTTTGGTTG TGAAAACCCA GATTGCATTG CGTGTTCTAA GAGTGCTAGA
CTTAAGAGAT TCCCTGTTAA CACAATTGTC AATGGTGTGC AACGTTCATT TTATGTTAAT GCAAATGGTG
GTAGTAAGTT TTGTAAGAAA CATAGATTTT TCTGTGTTGA TTGTGACTCT TATGGTTATG GCAGCACGTT
TATAACACCC GAAGTTTCTA GAGAACTTGG TAACATTACC AAAACAAATG TGCAACCAAC AGGCCCAGCG
TATGTCATGA TTGACAAAGT GGAGTTTGAA AATGGTTTTT ACAGATTGTA TTCCTGTGAA ACATTTTGGC
GTTACAACTT TGATATAACT GAAAGCAAGT ATTCTTGCAA AGAGGTTTTT AAAAATTGTA ATGTTTTGGA
TGATTTCATC GTGTTTAACA ATAATGGGAC CAATGTAACG CAGGTTAAAA ATGCTAGTGT TTACTTTTCA
CAGTTGTTGT GTAGGCCCAT TAAATTAGTT GACAGTGAAC TTTTGTCCAC TTTGTCAGTT GATTTTAATG
GTGTCTTACA CAAGGCATAC ATTGATGTAC TACGTAATAG CTTTGGTAAA GATCTTAATG CTAATATGTC
TTTAGCCGAG TGCAAGAGAG CTTTAGGCCT GTCTATTAGT GATCATGAAT TTACTAGTGC TATTTCTAAT
GCACATCGTT GTGACGTGTT GTTATCTGAT TTGTCATTTA ACAACTTTGT CAGTTCGTAT GCTAAACCTG
AGGAAAAATT ATCAGCTTAT GACTTGGCGT GTTGTATGCG TGCAGGTGCT AAGGTTGTTA ATGCCAATGT
TCTGACAAAG GACCAAACTC CTATTGTTTG GCATGCAAAG GATTTTAACA GTCTTTCTGC TGAAGGTCGC
AAGTATATTG TAAAAACTAG CAAAGCTAAG GGTTTGACTT TCTTGTTGAC AATTAATGAA AACCAAGCTG
TCACGCAAAT ACCTGCAACT AGCATTGTTG CTAAGCAAGG TGCTGGTGAT GCTGGCCATT CATTAACATG
GCTGTGGCTA CTGTGTGGTC TTGTGTGTTT GATTCAATTC TACTTGTGCT TTTTCATGCC CTATTTTATG
TACGATATCG TGAGTAGTTT TGAGGGTTAT GATTTTAAGT ATATAGAAAA TGGTCAGTTG AAGAATTTTG
AAGCGCCACT TAAATGCGTC AGAAACGTTT TTGAAAACTT TGAGGACTGG CATTATGCTA AGTTTGGCTT
CACACCTTTA AACAAGCAAA GCTGTCCTAT TGTAGTTGGA GTTTCTGAAA TTGTTAATAC TGTCGCTGGC
ATTCCATCTA ATGTGTATCT TGTTGGTAAA ACTTTAATTT TTACACTACA AGCTGCTTTT GGTAATGCTG
GTGTTTGTTA TGACATTTTT GGAGTCACAA CACCTGAAAA GTGCATTTTT ACTTCTGCTT GTACTAGATT
AGAAGGTTTG GGTGGTAACA ATGTTTATTG TTATAACACA GCGCTTATGG AAGGTTCTTT GCCTTACAGT
TCAATACAAG CTAATGCATA TTATAAATAT GACAATGGCA ATTTTATTAA GTTGCCAGAA GTTATTGCAC
AAGGCTTTGG TTTTAGAACA GTGCGTACTA TTGCCACCAA ATACTGCCGC GTAGGTGAAT GTGTTGAATC
CAATGCAGGT GTGTGTTTTG GCTTTGACAA GTGGTTTGTT AACGATGGAC GTGTTGCCAA TGGTTACGTT
TGTGGTACTG GTTTGTGGAA CCTTGTATTT AACATACTTT CCATGTTTTC ATCTTCATTC TCTGTTGCTG
CAATGTCAGG TCAAATTTTA CTTAATTGTG CATTAGGTGC TTTTGCTATT TTTTGTTGTT TTCTTGTGAC
AAAGTTTAGA CGCATGTTTG GTGACCTTTC TGTAGGTGTT TGCACTGTTG TTGTGGCTGT TTTGCTTAAC
AATGTCTCTT ACATTGTAAC TCAGAATTTA GTAACAATGA TTGCTTATGC CATATTGTAT TTCTTTGCTA
CTAGAAGCTT ACGCTATGCA TGGATTTGGT GTGCTGCATA TTTAATTGCG TATATTTCTT TTGCTCCATG
GTGGTTGTGT GCTTGGTACT TTCTTGCTAT GTTGACAGGT TTGTTACCTA GTTTGCTGAA GCTTAAAGTT
TCGACAAATC TTTTCGAAGG TGACAAATTT GTAGGTACAT TTGAAAGTGC TGCTGCAGGA ACATTTGTCA
TTGACATGCG TTCTTATGAG AAACTTGCTA ATAGCATCTC TCCAGAAAAG TTGAAAAGTT ATGCTGCTAG
CTATAATAGA TATAAGTACT ATAGTGGTAA TGCAAATGAA GCTGATTACC GTTGCGCTTG TTATGCCTAT
TTAGCAAAAG CAATGTTGGA CTTTTCGCGT GATCATAATG ACATCTTGTA CACACCTCCG ACTGTCAGTT
ATGGTTCTAC ATTACAGGCT GGTTTGCGCA AAATGGCACA ACCATCTGGC TTTGTGGAGA AATGTGTTGT
CCGTGTCTGC TATGGAAACA CTGTGTTGAA TGGGTTGTGG CTTGGTGATA TTGTTTATTG CCCACGTCAT
GTTATCGCAT CTAACACAAC TTCTGCTATA GATTATGATC ACGAATATAG TATTATGCGG TTGCATAATT
TTTCTATAAT ATCTGGTACA GCATTTCTTG GTGTTGTAGG TGCTACTATG CATGGAGTAA CTCTTAAAAT
TAAGGTTTCA CAGACTAACA TGCACACACC TAGACATTCT TTTAGAACAC TAAAATCTGG TGAAGGTTTT
AACATCTTAG CATGCTATGA TGGTTGTGCT CAAGGTGTTT TTGGTGTGAA CATGAGAACT AATTGGACTA
TCCGTGGTTC ATTTATTAAT GGTGCGTGTG GTTCCCCTGG CTACAATCTT AAAAATGGCG AGGTGGAATT
TGTTTATATG CATCAAATTG AACTCGGAAG TGGTAGCCAT GTAGGTTCTA GCTTTGATGG TGTTATGTAT
GGTGGTTTTG AAGACCAACC TAATCTTCAA GTTGAATCTG CAAACCAGAT GTTAACAGTT AATGTGGTTG
CATTTCTTTA TGCTGCTATA TTGAATGGTT GCACATGGTG GCTTAAAGGT GAAAAATTGT TTGTGGAGCA
TTATAATGAG TGGGCACAGG CTAATGGTTT CACAGCTATG AATGGTGAAG ACGCTTTTTC CATTCTTGCT
GCTAAAACTG GTGTCTGTGT GGAAAGATTA CTTCATGCTA TTCAAGTTTT GAATAATGGC TTTGGTGGTA
AACAAATTTT GGGTTATTCT AGTCTCAATG ATGAGTTCAG TATTAATGAA GTTGTCAAAC AAATGTTTGG
TGTTAACCTG CAAAGTGGTA AAACCACTAG TATGTTTAAA TCCATAAGCT TATTTGCTGG CTTCTTTGTC
ATGTTCTGGG CTGAATTATT TGTTTATACC ACCACTATTT GGGTTAACCC TGGTTTTCTT ACTCCGTTTA
TGATTTTGCT TGTTGCTTTG TCACTCTGTC TTACATTTGT TGTTAAACAT AAGGTTTTGT TTTTGCAAGT
GTTTTTGTTG CCTTCAATTA TTGTGGCTGC TATTCAAAAC TGTGCTTGGG ACTACCATGT TACAAAGGTG
TTGGCAGAGA AGTTTGATTA TAATGTTTCT GTTATGCAAA TGGACATCCA GGGTTTTGTT AACATTTTTA
TTTGTCTTTT TGTTGCACTG TTGCATACTT GGCGCTTTGC TAAAGAGCGT TGTACACATT GGTGCACTTA
TTTGTTCTCA CTCATTGCTG TTTTATACAC TGCATTGTAT AGTTATGACT ACGTTAGTTT GCTGGTTATG
CTACTTTGTG CAATTTCTAA TGAATGGTAT ATTGGTGCTA TTATTTTTAG AATTTGTCGT TTTGGTGTTG
CATTTTTACC AGTGGAATAC GTGTCTTACT TTGATGGTGT TAAAACTGTG CTGTTGTTTT ACATGTTGTT
AGGCTTTGTT AGCTGTATGT ACTATGGTTT GTTGTACTGG ATTAACAGGT TCTGTAAGTG CACATTAGGT
GTTTATGATT TCTGTGTTAG TCCAGCCGAA TTTAAGTATA TGGTTGCTAA TGGTTTGAAT GCACCAAATG
GCCCTTTTGA TGCGCTCTTT CTGTCTTTTA AACTAATGGG TATTGGCGGT CCTAGAACCA TTAAAGTTTC
TACTGTACAG TCTAAATTGA CTGATCTTAA GTGCACAAAC GTCGTTCTAA TGGGCATTTT GTCTAACATG
AACATAGCTT CTAATTCAAA GGAGTGGGCA TATTGTGTTG AAATGCACAA TAAAATAAAC TTGTGTGACG
ACCCTGAAAC TGCTCAAGAG TTATTGCTGG CGTTGTTGGC CTTTTTCTTG TCTAAGCATA GTGATTTTGG
TCTTGGTGAT CTTGTCGATT CTTATTTTGA GAACGACTCC ATTTTGCAAA GTGTTGCATC TTCTTTTGTT
GGTATGCCAT CTTTTGTTGC ATATGAAACA GCAAGACAAG AGTATGAAAA TGCTGTTGCA AATGGTTCCT
CACCACAAAT AATCAAACAA TTGAAGAAGG CTATGAATGT TGCAAAAGCT GAGTTTGACA GGGAATCATC
TGTTCAAAAG AAAATTAACA GAATGGCTGA ACAAGCTGCT GCAGCTATGT ACAAAGAAGC ACGTGCTGTT
AATAGAAAAT CAAAAGTTGT TAGTGCCATG CATAGTTTAC TCTTTGGCAT GCTCCGACGT TTGGACATGT
CTAGTGTTGA CACTATCCTT AATATGGCAC GTAATGGTGT TGTCCCTCTT TCCGTTATCC CTGCTACTTC
TGCAGCCAGG CTCGTCGTCG TAGTACCAGA TCATGATTCA TTTGTGAAAA TGATGGTAGA TGGTTTTGTG
CACTACGCTG GTGTTGTTTG GACATTACAG GAAGTTAAGG ATAATGATGG TAAGAATGTG CATCTTAAAG
ATGTTACAAA GGAAAACCAG GAAATACTTG TTTGGCCTCT GATTTTGACT TGTGAACGTG TCGTTAAATT
GCAGAACAAT GAAATAATGC CGGGCAAGAT GAAGGTCAAG GCCACCAAAG GTGAAGGTGA TGGAGGCATT
ACTAGTGAAG GTAATGCTCT ATACAACAAT GAAGGTGGAC GTGCATTCAT GTATGCATAT GTGACTACGA
AGCCTGGCAT GAAGTATGTT AAATGGGAAC ATGACTCTGG TGTGGTTACA GTTGAATTGG AACCACCTTG
CAGATTTGTT ATAGACACAC CTACTGGACC CCAAATTAAG TATCTTTATT TTGTTAAGAA TCTTAACAAT
TTAAGGAGAG GTGCTGTTTT GGGTTACATT GGTGCCACTG TGAGATTGCA AGCTGGCAAA CAGACTGAGT
TTGTTTCAAA CTCCCATTTA TTAACACATT GTTCTTTTGC TGTTGACCCA GCTGCAGCCT ATCTTGATGC
TGTTAAACAA GGCGCAAAAC CTGTTGGCAA TTGTGTAAAG ATGTTGACTA ATGGTTCTGG TAGCGGTCAG
GCTATTACTT GTACCATTGA TTCCAACACT ACGCAGGACA CATATGGTGG CGCGTCTGTT TGTATTTATT
GCAGAGCACA TGTTGCACAT CCAACCATGG ACGGTTTTTG TCAGTACAAA GGCAAGTGGG TACAAGTGCC
TATAGGTACA AATGACCCTA TAAGATCTTG TCTTGAAAAT ACTGTTTGTA AAGTTTGTGG TTGTTGGCTT
AATCATGGCT GTACATGTGA CCGGACTGCT ATCCAAAGTT TTGATAACAG TTATTTAAAC GAGTCCGGGG
CTCTAGTGCC GCTCGACTAG AGCCCTGTAA TGGTACAGAC ATAGATTACT GTGTCCGTGC ATTTGACGTT
TACAATAAAG ATGCGTCTTT TATCGGAAAA AATCTGAAGT CCAATTGTGT GCGCTTCAAG AATGTAGATA
AGGATGACGC GTTCTATATT GTTAAACGTT GCATTAAGTC AGTTATGGAC CACGAGCAGT CCATGTATAA
CTTACTTAAA GGCTGTAATG CTGTTGCTAA GCATGATTTC TTTACTTGGC ATGAGGGCAG AACCATTTAT
GGTAATGTTA GTAGACAGGA TCTTACTAAA TACACCATGA TGGATTTGTG CTTCGCTCTG CGTAACTTTG
ATGAAAAAGA CTGTGAAGTT TTTAAGGAGA TATTGGTTCT TACTGGTTGT TGTAGTACTG ATTACTTTGA
AATGAAGAAT TGGTTTGACC CCATAGAAAA TGAGGACATA CACCGTGTGT ATGCTGCTTT AGGTAAGGTA
GTTGCAAATG CAATGCTTAA GTGTGTTGCT TTTTGCGACG AAATGGTGCT CAAAGGAGTT GTTGGTGTTT
TGACCTTAGA CAACCAAGAT CTTAATGGGA ATTTCTATGA CTTCGGTGAC TTTGTATTGT GTCCTCCTGG
AATGGGAATA CCCTACTGCA CGTCATACTA TTCTTATATG ATGCCTGTTA TGGGTATGAC TAATTGTTTA
GCTAGTGAGT GCTTTATGAA AAGTGACATC TTTGGTCAAG ACTTCAAAAC TTTTGATTTG TTGAAATATG
ATTTCACAGA ACATAAGGAG GTTTTGTTTA ACAAGTACTT TAAGTATTGG GGACAGGATT ATCATCCTGA
TTGTGTTGAT TGCCATGACG AGATGTGTAT TTTGCATTGT TCAAATTTTA ACACACTCTT CGCAACCACA
ATTCCAAACA CGGCTTTTGG ACCTCTATGC AGAAAAGTGT TTATTGATGG TGTACCCGTA GTTGCTACTG
CTGGTTACCA CTTTAAACAA TTAGGACTTG TGTGGAACAA AGATGTTAAC ACTCATTCTA CCAGACTTAC
TATTACTGAA CTCTTACAGT TTGTGACAGA TCCAACGCTT ATAGTTGCGT CATCGCCTGC CTTGGTGGAT
AAACGCACTG TTTGTTTTTC TGTCGCTGCT TTGAGTACAG GATTAACATC CCAAACAGTA AAACCTGGCC
ATTTTAATAA GGAGTTTTAT GACTTCTTAC GTTCTCAGGG GTTTTTCGAT GAGGGTTCAG AATTAACATT
GAAGCATTTC TTTTTTACAC AAAAGGGTGA TGCTGCAATT AAAGATTTTG ATTATTATCG TTACAACAGA
CCTACTATGC TGGATATTGG ACAAGCTCGC GTACGATATC AAGTGGCAGC TCGCTATTTT GACTGTTACG
AGGGTGGCTG TATTACATCT AGAGAGGTTG TTGTTACAAA CCTTAATAAA AGCGCTGGTT GGCCCCTTAA
TAAGTTTGGT AAAGCTGGTT TATATTATGA GTCTATTAGT TATGAGGAAC AAGATGCTAT TTTTTCATTA
ACAAAGCGTA ATATTCTCCC TACTATGACT CAGTTAAATC TTAAATACGC CATATCTGGT AAGGAACGCG
CACGTACAGT GGGTGGCGTC TCTTTATTAG CTACTATGAC TACAAGACAG TTTCATCAGA AATGTCTGAA
ATCCATAGTA GCTACCAGAA ATGCCACCGT TGTTATCGGC ACTACCAAGT TTTATGGCGG GTGGGATAAT
ATGTTAAAGA ACCTGATGGC CGATGTTGAT GATCCTAAAT TGATGGGATG GGACTATCCT AAGTGTGATA
GAGCTATGCC CTCAATGATT CGTATGTTGT CGGCTATGAT CTTAGGTTCT AAGCATGTCA CATGTTGTAC
GGCTAGTGCT AAATTTTATA GACTTAGTAA TGAGCTTGCT CAAGTTTTGA CCGAGGTTGT TTATTCAAAT
GGTGGGTTTT ATTTTAAACC TGGTGGTACA ACTTCTGGTG ATGCAACTAC AGCCTACGCC AATTCTGTCT
TTAATATATT TCAGGCTGTA AGTTCTAACA TTAATTGCGT TTTGAGCGTT AACTCGTCAA ATTGCAATAA
TTTTAATGTT AAGAAGTTAC AGAGACAACT TTATGATAAT TGCTATAGAA ATAGTAATGT TGATGAATCT
TTTGTGGATG ACTTTTATGG TTATTTGCAA AAGCATTTTT CTATGATGAT TCTTTCTGAT GATAGTGTTG
TGTGCTATAA TAAAACTTAT GCTGGACTTG GTTACATTGC TGATATTAGT GCTTTTAAAG CCACTTTGTA
TTATCAGAAT GGTGTGTTTA TGAGTACAGC TAAGTGTTGG ACTGAGGAAG ATCTTTCTAT AGGACCTCAT
GAATTTTGCT CACAGCACAC TATGCAGATT GTAGATGAAA ATGGTAAGTA TTATCTACCA TATCCAGATC
CTAGCCGTAT TATTTCTGCT GGTGTTTTTG TGGATGACAT CACTAAGACT GATGCTGTCA TTCTTTTGGA
ACGCTATGTT TCTCTGGCTA TAGATGCCTA CCCATTGTCT AAGCATCCTA AACCTGAGTA CAGGAAGGTG
TTTTACGCAT TGTTAGACTG GGTCAAACAT CTCAACAAGA CTCTTAACGA AGGTGTTTTG GAGTCTTTTT
CTGTTACACT TTTAGATGAA CATGAGTCTA AGTTTTGGGA TGAAAGCTTT TATGCTAGTA TGTATGAGAA
GTCTACAGTA TTACAAGCTG CTGGTCTTTG TGTAGTATGT GGTTCTCAAA CAGTTCTAAG ATGCGGTGAT
TGTTTACGCA GACCGATGTT GTGCACTAAG TGCGCCTATG ATCATGTGTT TGGCACTGAT CATAAGTTCA
TTTTAGCTAT TACACCATAT GTGTGTAACA CATCTGGCTG CAATGTAAAT GACGTTACAA AACTGTATCT
TGGAGGTTTG AATTATTACT GTGTAGACCA CAAACCACAT CTTTCATTCC CACTGTGTTC AGCTGGTAAT
GTCTTTGGTT TGTACAAAAG TTCTGCTTTG GGTTCCATGG ACATTGATGT CTTTAACAAA CTTTCTACCT
CTGATTGGTC TGACATTCGC GACTACAAGC TTGCTAATGA TGCAAAAGAG TCACTAAGGT TGTTTGCAGC
TGAAACGGTC AAGGCCAAAG AGGAAAGTGT TAAGTCATCA TACGCTTATG CTACCCTAAA GGAGATTGTA
GGTCCTAAGG AACTTTTGCT CTTATGGGAA AGTGGAAAAG CCAAACCACC GTTAAACCGT AATTCTGTTT
TTACATGCTT CCAAATTACA AAAGACTCCA AGTTTCAAGT TGGTGAGTTT GTGTTTGAGA AAGTAGATTA
CGGTTCTGAT ACGGTTACTT ACAAATCCAC TGCTACTACT AAGTTAGTAC CAGGTATGTT GTTTATTTTG
ACTTCTCATA ATGTTGCTCC ACTTAGAGCG CCAACAATGG CAAACCAGGA GACATATTCT ACCATTTACA
AGTTGCACCC ATCATTTAAT GTTAGTGATG CTTATGCAAA TCTTGTACCT TATTACCAAC TTATTGGCAA
ACAGCGTATA ACCACAATAC AGGGTCCTCC TGGTAGTGGA AAATCGCATT GTTCTATTGG TATTGGTGTG
TATTACCCTG GAGCGAGGAT CGTGTTCACC GCTTGTTCTC ACGCTGCTGT TGATTCGCTC TGTGCAAAAG
CTGTCACAGC CTATAGTGTT GATAAGTGTA CACGTATTAT TCCTGCACGT GCCAGAGTTG AGTGTTATAG
TGGTTTTAAA CCTAACAATA ATAGTGCACA ATACGTGTTT AGTACTGTTA ATGCGTTACC TGAAGTTAAT
GCAGACATTG TTGTCGTGGA TGAGGTGTCT ATGTGCACTA ACTATGACTT GTCTGTGATT AACCAGCGTA
TATCATATAA ACACATTGTA TATGTTGGTG ATCCTCAACA GCTTCCAGCT CCTAGAGTTC TTATCTCTAA
AGGTGTTATG GAACCAATTG ACTATAATGT TGTGACACAA CGTATGTGTG CTATAGGACC CGATGTCTTT
TTACACAAGT GTTACAGATG TCCTGCTGAA ATAGTTAACA CTGTTTCAGA GCTTGTTTAT GAAAACAAGT
TTGTACCTGT CAAAGAAGCT AGTAAGCAGT GCTTCAAAAT CTTTGAACGC GGTAGTGTTC AGGTAGACAA
TGGCTCCAGT ATAAATAGGC GTCAACTTGA TGTTGTTAAG CGATTTATAC ATAAAAACTC CACATGGAGC
AAGGCTGTGT TTATCTCACC TTACAATAGT CAAAATTATG TAGCTGCCAG GCTTTTAGGC TTACAAACTC
AGACAGTGGA TTCTGCTCAA GGTAGTGAAT ATGACTATGT TATATTCGCA CAGACATCAG ATACTGCTCA
TGCCTGTAAT GCCAATCGTT TTAACGTTGC CATTACTAGA GCAAAGAAAG GTATTTTCTG TATTATGTCT
GACAGAACTT TGTTTGATGC ACTTAAGTTC TTTGAAATCA CTATGACAGA TTTACAGTCT GAAAGTAGTT
GTGGTTTGTT TAAGGATTGT GCACGTAACC CTATTGATTT ACCACCAAGT CATGCCACTA CTTATTTGTC
ATTGTCTGAT AGATTTAAGA CTAGTGGTGA CTTGGCTGTT CAAATAGGTA ACAACAATGT TTGTACCTAT
GAACATGTGA TTTCATATAT GGGTTTCAGG TTTGATGTTA GCATGCCTGG TAGTCATAGT TTGTTCTGTA
CTAGAGACTT TGCCATGCGT CATGTCAGAG GTTGGTTAGG AATGGATGTG GAAGGTGCAC ATGTCACAGG
TGACAATGTT GGCACTAATG TACCTCTACA AGTTGGTTTT TCCAATGGTG TTGATTTTGT AGCTCAACCT
GAAGGTTGTG TTCTAACAAA CACTGGCAGT GTTGTAAAAC CTGTTCGTGC TCGTGCACCA CCTGGAGAAC
AATTCACTCA CATTGTACCT CTGTTACGCA AGGGACAACC TTGGAGTGTG TTGAGAAAAC GTATTGTTCA
AATGATAGCA GATTTTCTTG CTGGCTCATC TGATGTACTG GTGTTTGTAC TTTGGGCTGG CGGTTTAGAG
TTGACCACTA TGCGTTATTT TGTTAAGATT GGAGCTGTTA AACATTGCCA ATGTGGTACT GTTGCAACAT
GCTACAATTC TGTTAGTAAT GACTATTGTT GCTTTAAACA TGCATTGGGC TGTGACTATG TTTATAATCC
ATATGTCATA GATATTCAAC AATGGGGTTA TGTTGGTTCA CTCTCCACTA ATCACCATGC AATTTGTAAT
GTTCATAGAA ATGAGCATGT TGCTTCTGGT GATGCTATTA TGACTAGATG TTTGGCTGTG TATGACTGCT
TTGTTAAGAA TGTGGATTGG TCAATTACCT ACCCTATGAT AGCTAATGAA AATGCCATAA ACAAGGGCGG
TCGCACTGTG CAGAGTCATA TTATGCGTGC TGCTATTAAA TTGTACAACC CTAAAGCAAT CCATGACATT
GGTAATCCTA AGGGTATTCG TTGTGCTGTA ACTGATGCCA AGTGGTATTG TTATGACAAG AACCCTATTA
ATTCTAATGT GAAAACATTG GAGGATGATT ACATGACACA TGGCCAAATG GATGGCTTGT GTTTGTTTTG
GAATTGTAAT GTGGATATGT ACCCTGAATT CTCAATTGTT TGCAGGTTTG ACACACGTAC ACGATCTACA
TTGAACCTTG AAGGTGTAAA TGGTGGGTCA TTGTATGTCA ATAATCATGC ATTTCACACT CCTGCTTATG
ATAAACGTGC TATGGCTAAA TTGAAACCAG CACCGTTTTT CTACTATGAC GACGGTTCAT GTGAGGTTGT
TCACGATCAA GTTAACTATG TTCCTTTGAG AGCCACTAAT TGCATTACCA AGTGTAATAT TGGTGGTGCT
GTATGTTCTA AGCACGCTAA TCTCTATAGA GCATATGTTG AGTCATATAA CATTTTTACT CAAGCTGGTT
TTAATATTTG GGTTCCTACC ACGTTTGATT GTTATAATTT GTGGCAGACA TTCACAGAGG TCAATTTACA
AGGTTTAGAG AACATTGCTT TTAACGTTGT TAATAAAGGT TCATTTGTTG GTGCTGATGG TGAATTACCA
GTAGCCATTA GTGGTGATAA AGTGTTCGTA CGTGATGGTA ACACTGATAA TTTAGTCTTT GTTAACAAAA
CATCACTGCC TACAAACATA GCATTTGAAC TTTTTGCTAA GAGGAAGGTT GGTTTAACAC CACCTCTCAG
TATTCTCAAA AACCTTGGTG TTGTCGCCAC ATATAAGTTT GTCTTGTGGG ATTATGAAGC TGAGCGTCCC
TTGACAAGCT TTACTAAGTC TGTTTGTGGT TATACAGACT TTGCAGAGGA TGTTTGTACT TGTTACGATA
ATAGTATACA AGGTTCATAC GAACGTTTTA CTCTGTCAAC TAATGCTGTG TTATTCTCTG CTACTGCTGT
GAAAACAGGT GGTAAGAGTT TGCCGGCTAT TAAATTGAAT TTTGGAATGC TTAATGGTAA TGCAATTGCT
ACTGTCAAAT CAGAAGATGG TAACATAAAA AATATTAACT GGTTTGTTTA CGTACGCAAA GATGGCAAAC
CTGTTGATCA TTATGATGGT TTTTATACCC AAGGTCGTAA TTTACAAGAC TTTTTGCCTC GCAGCACAAT
GGAAGAAGAC TTTTTGAACA TGGATATAGG CGTGTTTATT CAAAAGTATG GTCTAGAGGA TTTCAACTTC
GAGCACGTTG TGTATGGTGA TGTTTCAAAA ACTACTCTAG GCGGTTTACA CTTGTTGATT TCACAAGTAC
GTCTGAGTAA AATGGGCATC TTAAAGGCAG AGGAGTTTGT GGCAGCATCT GACATAACAC TCAAATGTTG
TACTGTGACT TATCTTAATG ATCCTAGTTC TAAGACTGTT TGTACTTACA TGGATTTGTT GTTGGATGAT
TTTGTTTCTG TATTGAAGTC TTTGGATTTG ACTGTTGTAT CCAAGGTTCA TGAGGTCATA ATTGACAACA
AACCATGGAG ATGGATGCTA TGGTGTAAAG ATAATGCCGT TGCTACATTC TATCCTCAGT TGCAGAGTGC
AGAATGGAAA TGCGGGTATT CTATGCCTGG TATTTATAAG ACACAACGTA TGTGCTTAGA ACCATGTAAT
TTGTATAATT ATGGTGCAGG TTTGAAGTTG CCCAGTGGCA TTATGTTCAA TGTTGTTAAA TACACTCAAT
TGTGTCAATA TTTTAACAGT ACCACGTTAT GTGTTCCTCA TAATATGAGA GTGTTACACT TGGGTGCTGG
CTCTGATTAT GGTGTTGCAC CAGGAACTGC TGTTCTTAAA AGGTGGTTGC CGCACGACGC AATTGTTGTT
GACAACGATG TTGTTGACTA TGTGAGTGAC GCTGATTTTA GTGTTACTGG TGATTGTGCA ACCGTTTATT
TGGAAGACAA GTTTGACTTG TTAATCTCTG ATATGTACGA TGGTAGGACA AAGGCAATTG ATGGTGAAAA
TGTTTCGAAA GAAGGATTTT TCACTTACAT CAATGGTTTC ATTTGTGAAA AACTTGCCAT CGGAGGTTCG
ATTGCTATTA AAGTAACAGA GTATAGCTGG AATAAGAAAT TGTATGAACT TGTACAAAGA TTTTCTTTTT
GGACTATGTT TTGCACTTCT GTTAATACGT CATCATCAGA AGCCTTTGTT GTCGGAATTA ACTATCTTGG
TGATTTCGCA CAAGGACCTT TTATAGATGG TAACATAATA CACGCAAATT ATGTATTTTG GCGTAACTCC
ACTGTTATGA GTTTGTCCTA CAACTCTGTT TTAGACCTGA GTAAATTTAA TTGCAAACAC AAAGCGACTG
TTGTTGTGCA ATTAAAGGAT AGTGATATTA ATGAAATGGT GCTTAGTCTT GTTAGGAGTG GTAAGTTGCT
TGTAAGGGGT AATGGCAAGT GTTTGAGTTT TAGTAATCAT TTAGTCTCAA CTAAATAA
Products
| Product | gag |
| Description | gag capsid polyprotein |
MACNRVTLAV ASDSEISANG CSTIAQAVRR YSEAASNGFR ACRFVSLDLQ DCIVGIADDT YVMGLHGNQT
LFCNIMKFSD RPFMLHGWLV FSNSNYLLEE FDVVFGKRGG GNVTYTDQYL CGADGKPVMS EDLWQFVDHF
GENEEIIING HTYVCAWLTK RKPLDYKRQN NLAIEEIEYV HGDALHTLRN GSVLEMAKEV KTSSKVVLSD
ALDKLYKVFG SPVMTNGSNI LEAFTKPVFI SALVQCTCGT KSWSVGDWTG FKSSCCNVIS NKLCVVPGNV
KPGDAVITTQ QAGAGIKYFC GMTLKFVANI EGVSVWRVIA LQSVDCFVAS STFVEEEHVN RMDTFCFNVR
NSVTDECRLA MLGAEMTSNV RRQVASGVID ISTGWFDVYD DIFAESKPWF VRKAEDIFGP CWSALASALK
QLKVTTGELV RFVKSICNSA VAVVGGTIQI LASVPEKFLN AFDVFVTAIQ TVFDCAVETC TIAGKAFDKV
FDYVLLDNAL VKLVTTKLKG VRERGLNKVK YATVVVGSTE EVKSSRVERS TAVLTIANNY SKLFDEGYTV
VIGDVAYFVS DGYFRLMASP NSVLTTAVYK PLFAFNVNVM GTRPEKFPTT VTCENLESAV LFVNDKITEF
QLDYSIDVID NEIIVKPNIS LCVPLYVRDY VDKWDDFCRQ YSNESWFEDD YRAFISVLDI TDAAVKAAES
KAFVDTIVPP CPSILKVIDG GKIWNGVIKN VNSVRDWLKS LKLNLTQQGL LGTCAKRFKR WLGILLEAYN
AFLDTVVSTV KIGGLTFKTY AFDKPYIVIR DIVCKVENKT EAEWIELFPH NDRIKSFSTF ESAYMPIADP
THFDIEEVEL LDAEFVEPGC GGILAVIDEH VFYKKDGVYY PSNGTNILPV AFTKAAGGKV SFSDDVEVKD
IEPVYRVKLC FEFEDEKLVD VCEKAIGKKI KHEGDWDSFC KTIQSALSVV SCYVNLPTYY IYDEEGGNDL
SLPVMISEWP LSVQQAQQEA TLPDIAEDVV DQVEEVNSIF DIETVDVKHD VSPFEMPFEE LNGLKILKQL
DNNCWVNSVM LQIQLTGILD GDYAMQFFKM GRVAKMIERC YTAEQCIRGA MGDVGLCMYR LLKDLHTGFM
VMDYKCSCTS GRLEESGAVL FCTPTKKAFP YGTCLNCNAP RMCTIRQLQG TIIFVQQKPE PVNPVSFVVK
PVCSSIFRGA VSCGHYQTNI YSQNLCVDGF GVNKIQPWTN DALNTICIKD ADYNAKVEIS VTPIKNTVDT
TPKEEFVVKE KLNAFLVHDN VAFYQGDVDT VVNGVDFDFI VNAANENLAH GGGLAKALDV YTKGKLQRLS
KEHIGLAGKV KVGTGVMVEC DSLRIFNVVG PRKGKHERDL LIKAYNTINN EQGTPLTPIL SCGIFGIKLE
TSLEVLLDVC NTKEVKVFVY TDTEVCKVKD FVSGLVNVQK VEQPKIEPKP VSVIKVAPKP YRVDGKFSYF
TEDLLCVADD KPIVLFTDSM LTLDDRGLAL DNALSGVLSA AIKDCVDINK AIPSGNLIKF DIGSVVVYMC
VVPSEKDKHL DNNVQRCTRK LNRLMCDIVC TIPADYILPL VLSSLTCNVS FVGELKAAEA KVITIKVTED
GVNVHDVTVT TDKSFEQQVG VIADKDKDLS GAVPSDLNTS ELLTKAIDVD WVEFYGFKDA VTFATVDHSA
FAYESAVVNG IRVLKTSDNN CWVNAVCIAL QYSKPHFISQ GLDAAWNKFV LGDVEIFVAF VYYVARLMKG
DKGDAEDTLT KLSKYLANEA QVQLEHYSSC VECDAKFKNS VASINSAIVC ASVKRDGVQV GYCVHGIKYY
SRVRSVRGRA IIVSVEQLEP CAQSRLLSGV AYTAFSGPVD KGHYTVYDTA KKSMYDGDRF VKHDLSLLSV
TSVVMVGGYV APVNTVKPKP VINQLDEKAQ KFFDFGDFLI HNFVIFFTWL LSMFTLCKTA VTTGDVKIMA
KAPQRTGVVL KRSLKYNLKA SQAVLKSKWW LLAKFTKLLL LIYTLYSVVL LCVRFGPFNF CSETVNGYAK
SNFVKDDYCD GSLGCKMCLF GYQELSQFSH LDVVWKHITD PLFSNMQPFI VMVLLLIFGD NYLRCFLLYF
VAQMISTVGV FLGYKETNWF LHFIPFDVIC DELLVTVIVI KVISFVRHVL FGCENPDCIA CSKSARLKRF
PVNTIVNGVQ RSFYVNANGG SKFCKKHRFF CVDCDSYGYG STFITPEVSR ELGNITKTNV QPTGPAYVMI
DKVEFENGFY RLYSCETFWR YNFDITESKY SCKEVFKNCN VLDDFIVFNN NGTNVTQVKN ASVYFSQLLC
RPIKLVDSEL LSTLSVDFNG VLHKAYIDVL RNSFGKDLNA NMSLAECKRA LGLSISDHEF TSAISNAHRC
DVLLSDLSFN NFVSSYAKPE EKLSAYDLAC CMRAGAKVVN ANVLTKDQTP IVWHAKDFNS LSAEGRKYIV
KTSKAKGLTF LLTINENQAV TQIPATSIVA KQGAGDAGHS LTWLWLLCGL VCLIQFYLCF FMPYFMYDIV
SSFEGYDFKY IENGQLKNFE APLKCVRNVF ENFEDWHYAK FGFTPLNKQS CPIVVGVSEI VNTVAGIPSN
VYLVGKTLIF TLQAAFGNAG VCYDIFGVTT PEKCIFTSAC TRLEGLGGNN VYCYNTALME GSLPYSSIQA
NAYYKYDNGN FIKLPEVIAQ GFGFRTVRTI ATKYCRVGEC VESNAGVCFG FDKWFVNDGR VANGYVCGTG
LWNLVFNILS MFSSSFSVAA MSGQILLNCA LGAFAIFCCF LVTKFRRMFG DLSVGVCTVV VAVLLNNVSY
IVTQNLVTMI AYAILYFFAT RSLRYAWIWC AAYLIAYISF APWWLCAWYF LAMLTGLLPS LLKLKVSTNL
FEGDKFVGTF ESAAAGTFVI DMRSYEKLAN SISPEKLKSY AASYNRYKYY SGNANEADYR CACYAYLAKA
MLDFSRDHND ILYTPPTVSY GSTLQAGLRK MAQPSGFVEK CVVRVCYGNT VLNGLWLGDI VYCPRHVIAS
NTTSAIDYDH EYSIMRLHNF SIISGTAFLG VVGATMHGVT LKIKVSQTNM HTPRHSFRTL KSGEGFNILA
CYDGCAQGVF GVNMRTNWTI RGSFINGACG SPGYNLKNGE VEFVYMHQIE LGSGSHVGSS FDGVMYGGFE
DQPNLQVESA NQMLTVNVVA FLYAAILNGC TWWLKGEKLF VEHYNEWAQA NGFTAMNGED AFSILAAKTG
VCVERLLHAI QVLNNGFGGK QILGYSSLND EFSINEVVKQ MFGVNLQSGK TTSMFKSISL FAGFFVMFWA
ELFVYTTTIW VNPGFLTPFM ILLVALSLCL TFVVKHKVLF LQVFLLPSII VAAIQNCAWD YHVTKVLAEK
FDYNVSVMQM DIQGFVNIFI CLFVALLHTW RFAKERCTHW CTYLFSLIAV LYTALYSYDY VSLLVMLLCA
ISNEWYIGAI IFRICRFGVA FLPVEYVSYF DGVKTVLLFY MLLGFVSCMY YGLLYWINRF CKCTLGVYDF
CVSPAEFKYM VANGLNAPNG PFDALFLSFK LMGIGGPRTI KVSTVQSKLT DLKCTNVVLM GILSNMNIAS
NSKEWAYCVE MHNKINLCDD PETAQELLLA LLAFFLSKHS DFGLGDLVDS YFENDSILQS VASSFVGMPS
FVAYETARQE YENAVANGSS PQIIKQLKKA MNVAKAEFDR ESSVQKKINR MAEQAAAAMY KEARAVNRKS
KVVSAMHSLL FGMLRRLDMS SVDTILNMAR NGVVPLSVIP ATSAARLVVV VPDHDSFVKM MVDGFVHYAG
VVWTLQEVKD NDGKNVHLKD VTKENQEILV WPLILTCERV VKLQNNEIMP GKMKVKATKG EGDGGITSEG
NALYNNEGGR AFMYAYVTTK PGMKYVKWEH DSGVVTVELE PPCRFVIDTP TGPQIKYLYF VKNLNNLRRG
AVLGYIGATV RLQAGKQTEF VSNSHLLTHC SFAVDPAAAY LDAVKQGAKP VGNCVKMLTN GSGSGQAITC
TIDSNTTQDT YGGASVCIYC RAHVAHPTMD GFCQYKGKWV QVPIGTNDPI RSCLENTVCK VCGCWLNHGC
TCDRTAIQSF DNSYLNESGA LVPLD
| Product | gag-pol |
| Description | gag capsid polyprotein, RNA polymerase |
| Modifications | 12520..12520:ribosomal_frameshift |
MACNRVTLAV ASDSEISANG CSTIAQAVRR YSEAASNGFR ACRFVSLDLQ DCIVGIADDT YVMGLHGNQT
LFCNIMKFSD RPFMLHGWLV FSNSNYLLEE FDVVFGKRGG GNVTYTDQYL CGADGKPVMS EDLWQFVDHF
GENEEIIING HTYVCAWLTK RKPLDYKRQN NLAIEEIEYV HGDALHTLRN GSVLEMAKEV KTSSKVVLSD
ALDKLYKVFG SPVMTNGSNI LEAFTKPVFI SALVQCTCGT KSWSVGDWTG FKSSCCNVIS NKLCVVPGNV
KPGDAVITTQ QAGAGIKYFC GMTLKFVANI EGVSVWRVIA LQSVDCFVAS STFVEEEHVN RMDTFCFNVR
NSVTDECRLA MLGAEMTSNV RRQVASGVID ISTGWFDVYD DIFAESKPWF VRKAEDIFGP CWSALASALK
QLKVTTGELV RFVKSICNSA VAVVGGTIQI LASVPEKFLN AFDVFVTAIQ TVFDCAVETC TIAGKAFDKV
FDYVLLDNAL VKLVTTKLKG VRERGLNKVK YATVVVGSTE EVKSSRVERS TAVLTIANNY SKLFDEGYTV
VIGDVAYFVS DGYFRLMASP NSVLTTAVYK PLFAFNVNVM GTRPEKFPTT VTCENLESAV LFVNDKITEF
QLDYSIDVID NEIIVKPNIS LCVPLYVRDY VDKWDDFCRQ YSNESWFEDD YRAFISVLDI TDAAVKAAES
KAFVDTIVPP CPSILKVIDG GKIWNGVIKN VNSVRDWLKS LKLNLTQQGL LGTCAKRFKR WLGILLEAYN
AFLDTVVSTV KIGGLTFKTY AFDKPYIVIR DIVCKVENKT EAEWIELFPH NDRIKSFSTF ESAYMPIADP
THFDIEEVEL LDAEFVEPGC GGILAVIDEH VFYKKDGVYY PSNGTNILPV AFTKAAGGKV SFSDDVEVKD
IEPVYRVKLC FEFEDEKLVD VCEKAIGKKI KHEGDWDSFC KTIQSALSVV SCYVNLPTYY IYDEEGGNDL
SLPVMISEWP LSVQQAQQEA TLPDIAEDVV DQVEEVNSIF DIETVDVKHD VSPFEMPFEE LNGLKILKQL
DNNCWVNSVM LQIQLTGILD GDYAMQFFKM GRVAKMIERC YTAEQCIRGA MGDVGLCMYR LLKDLHTGFM
VMDYKCSCTS GRLEESGAVL FCTPTKKAFP YGTCLNCNAP RMCTIRQLQG TIIFVQQKPE PVNPVSFVVK
PVCSSIFRGA VSCGHYQTNI YSQNLCVDGF GVNKIQPWTN DALNTICIKD ADYNAKVEIS VTPIKNTVDT
TPKEEFVVKE KLNAFLVHDN VAFYQGDVDT VVNGVDFDFI VNAANENLAH GGGLAKALDV YTKGKLQRLS
KEHIGLAGKV KVGTGVMVEC DSLRIFNVVG PRKGKHERDL LIKAYNTINN EQGTPLTPIL SCGIFGIKLE
TSLEVLLDVC NTKEVKVFVY TDTEVCKVKD FVSGLVNVQK VEQPKIEPKP VSVIKVAPKP YRVDGKFSYF
TEDLLCVADD KPIVLFTDSM LTLDDRGLAL DNALSGVLSA AIKDCVDINK AIPSGNLIKF DIGSVVVYMC
VVPSEKDKHL DNNVQRCTRK LNRLMCDIVC TIPADYILPL VLSSLTCNVS FVGELKAAEA KVITIKVTED
GVNVHDVTVT TDKSFEQQVG VIADKDKDLS GAVPSDLNTS ELLTKAIDVD WVEFYGFKDA VTFATVDHSA
FAYESAVVNG IRVLKTSDNN CWVNAVCIAL QYSKPHFISQ GLDAAWNKFV LGDVEIFVAF VYYVARLMKG
DKGDAEDTLT KLSKYLANEA QVQLEHYSSC VECDAKFKNS VASINSAIVC ASVKRDGVQV GYCVHGIKYY
SRVRSVRGRA IIVSVEQLEP CAQSRLLSGV AYTAFSGPVD KGHYTVYDTA KKSMYDGDRF VKHDLSLLSV
TSVVMVGGYV APVNTVKPKP VINQLDEKAQ KFFDFGDFLI HNFVIFFTWL LSMFTLCKTA VTTGDVKIMA
KAPQRTGVVL KRSLKYNLKA SQAVLKSKWW LLAKFTKLLL LIYTLYSVVL LCVRFGPFNF CSETVNGYAK
SNFVKDDYCD GSLGCKMCLF GYQELSQFSH LDVVWKHITD PLFSNMQPFI VMVLLLIFGD NYLRCFLLYF
VAQMISTVGV FLGYKETNWF LHFIPFDVIC DELLVTVIVI KVISFVRHVL FGCENPDCIA CSKSARLKRF
PVNTIVNGVQ RSFYVNANGG SKFCKKHRFF CVDCDSYGYG STFITPEVSR ELGNITKTNV QPTGPAYVMI
DKVEFENGFY RLYSCETFWR YNFDITESKY SCKEVFKNCN VLDDFIVFNN NGTNVTQVKN ASVYFSQLLC
RPIKLVDSEL LSTLSVDFNG VLHKAYIDVL RNSFGKDLNA NMSLAECKRA LGLSISDHEF TSAISNAHRC
DVLLSDLSFN NFVSSYAKPE EKLSAYDLAC CMRAGAKVVN ANVLTKDQTP IVWHAKDFNS LSAEGRKYIV
KTSKAKGLTF LLTINENQAV TQIPATSIVA KQGAGDAGHS LTWLWLLCGL VCLIQFYLCF FMPYFMYDIV
SSFEGYDFKY IENGQLKNFE APLKCVRNVF ENFEDWHYAK FGFTPLNKQS CPIVVGVSEI VNTVAGIPSN
VYLVGKTLIF TLQAAFGNAG VCYDIFGVTT PEKCIFTSAC TRLEGLGGNN VYCYNTALME GSLPYSSIQA
NAYYKYDNGN FIKLPEVIAQ GFGFRTVRTI ATKYCRVGEC VESNAGVCFG FDKWFVNDGR VANGYVCGTG
LWNLVFNILS MFSSSFSVAA MSGQILLNCA LGAFAIFCCF LVTKFRRMFG DLSVGVCTVV VAVLLNNVSY
IVTQNLVTMI AYAILYFFAT RSLRYAWIWC AAYLIAYISF APWWLCAWYF LAMLTGLLPS LLKLKVSTNL
FEGDKFVGTF ESAAAGTFVI DMRSYEKLAN SISPEKLKSY AASYNRYKYY SGNANEADYR CACYAYLAKA
MLDFSRDHND ILYTPPTVSY GSTLQAGLRK MAQPSGFVEK CVVRVCYGNT VLNGLWLGDI VYCPRHVIAS
NTTSAIDYDH EYSIMRLHNF SIISGTAFLG VVGATMHGVT LKIKVSQTNM HTPRHSFRTL KSGEGFNILA
CYDGCAQGVF GVNMRTNWTI RGSFINGACG SPGYNLKNGE VEFVYMHQIE LGSGSHVGSS FDGVMYGGFE
DQPNLQVESA NQMLTVNVVA FLYAAILNGC TWWLKGEKLF VEHYNEWAQA NGFTAMNGED AFSILAAKTG
VCVERLLHAI QVLNNGFGGK QILGYSSLND EFSINEVVKQ MFGVNLQSGK TTSMFKSISL FAGFFVMFWA
ELFVYTTTIW VNPGFLTPFM ILLVALSLCL TFVVKHKVLF LQVFLLPSII VAAIQNCAWD YHVTKVLAEK
FDYNVSVMQM DIQGFVNIFI CLFVALLHTW RFAKERCTHW CTYLFSLIAV LYTALYSYDY VSLLVMLLCA
ISNEWYIGAI IFRICRFGVA FLPVEYVSYF DGVKTVLLFY MLLGFVSCMY YGLLYWINRF CKCTLGVYDF
CVSPAEFKYM VANGLNAPNG PFDALFLSFK LMGIGGPRTI KVSTVQSKLT DLKCTNVVLM GILSNMNIAS
NSKEWAYCVE MHNKINLCDD PETAQELLLA LLAFFLSKHS DFGLGDLVDS YFENDSILQS VASSFVGMPS
FVAYETARQE YENAVANGSS PQIIKQLKKA MNVAKAEFDR ESSVQKKINR MAEQAAAAMY KEARAVNRKS
KVVSAMHSLL FGMLRRLDMS SVDTILNMAR NGVVPLSVIP ATSAARLVVV VPDHDSFVKM MVDGFVHYAG
VVWTLQEVKD NDGKNVHLKD VTKENQEILV WPLILTCERV VKLQNNEIMP GKMKVKATKG EGDGGITSEG
NALYNNEGGR AFMYAYVTTK PGMKYVKWEH DSGVVTVELE PPCRFVIDTP TGPQIKYLYF VKNLNNLRRG
AVLGYIGATV RLQAGKQTEF VSNSHLLTHC SFAVDPAAAY LDAVKQGAKP VGNCVKMLTN GSGSGQAITC
TIDSNTTQDT YGGASVCIYC RAHVAHPTMD GFCQYKGKWV QVPIGTNDPI RSCLENTVCK VCGCWLNHGC
TCDRTAIQSF DNSYLNRVRG SSAARLEPCN GTDIDYCVRA FDVYNKDASF IGKNLKSNCV RFKNVDKDDA
FYIVKRCIKS VMDHEQSMYN LLKGCNAVAK HDFFTWHEGR TIYGNVSRQD LTKYTMMDLC FALRNFDEKD
CEVFKEILVL TGCCSTDYFE MKNWFDPIEN EDIHRVYAAL GKVVANAMLK CVAFCDEMVL KGVVGVLTLD
NQDLNGNFYD FGDFVLCPPG MGIPYCTSYY SYMMPVMGMT NCLASECFMK SDIFGQDFKT FDLLKYDFTE
HKEVLFNKYF KYWGQDYHPD CVDCHDEMCI LHCSNFNTLF ATTIPNTAFG PLCRKVFIDG VPVVATAGYH
FKQLGLVWNK DVNTHSTRLT ITELLQFVTD PTLIVASSPA LVDKRTVCFS VAALSTGLTS QTVKPGHFNK
EFYDFLRSQG FFDEGSELTL KHFFFTQKGD AAIKDFDYYR YNRPTMLDIG QARVRYQVAA RYFDCYEGGC
ITSREVVVTN LNKSAGWPLN KFGKAGLYYE SISYEEQDAI FSLTKRNILP TMTQLNLKYA ISGKERARTV
GGVSLLATMT TRQFHQKCLK SIVATRNATV VIGTTKFYGG WDNMLKNLMA DVDDPKLMGW DYPKCDRAMP
SMIRMLSAMI LGSKHVTCCT ASAKFYRLSN ELAQVLTEVV YSNGGFYFKP GGTTSGDATT AYANSVFNIF
QAVSSNINCV LSVNSSNCNN FNVKKLQRQL YDNCYRNSNV DESFVDDFYG YLQKHFSMMI LSDDSVVCYN
KTYAGLGYIA DISAFKATLY YQNGVFMSTA KCWTEEDLSI GPHEFCSQHT MQIVDENGKY YLPYPDPSRI
ISAGVFVDDI TKTDAVILLE RYVSLAIDAY PLSKHPKPEY RKVFYALLDW VKHLNKTLNE GVLESFSVTL
LDEHESKFWD ESFYASMYEK STVLQAAGLC VVCGSQTVLR CGDCLRRPML CTKCAYDHVF GTDHKFILAI
TPYVCNTSGC NVNDVTKLYL GGLNYYCVDH KPHLSFPLCS AGNVFGLYKS SALGSMDIDV FNKLSTSDWS
DIRDYKLAND AKESLRLFAA ETVKAKEESV KSSYAYATLK EIVGPKELLL LWESGKAKPP LNRNSVFTCF
QITKDSKFQV GEFVFEKVDY GSDTVTYKST ATTKLVPGML FILTSHNVAP LRAPTMANQE TYSTIYKLHP
SFNVSDAYAN LVPYYQLIGK QRITTIQGPP GSGKSHCSIG IGVYYPGARI VFTACSHAAV DSLCAKAVTA
YSVDKCTRII PARARVECYS GFKPNNNSAQ YVFSTVNALP EVNADIVVVD EVSMCTNYDL SVINQRISYK
HIVYVGDPQQ LPAPRVLISK GVMEPIDYNV VTQRMCAIGP DVFLHKCYRC PAEIVNTVSE LVYENKFVPV
KEASKQCFKI FERGSVQVDN GSSINRRQLD VVKRFIHKNS TWSKAVFISP YNSQNYVAAR LLGLQTQTVD
SAQGSEYDYV IFAQTSDTAH ACNANRFNVA ITRAKKGIFC IMSDRTLFDA LKFFEITMTD LQSESSCGLF
KDCARNPIDL PPSHATTYLS LSDRFKTSGD LAVQIGNNNV CTYEHVISYM GFRFDVSMPG SHSLFCTRDF
AMRHVRGWLG MDVEGAHVTG DNVGTNVPLQ VGFSNGVDFV AQPEGCVLTN TGSVVKPVRA RAPPGEQFTH
IVPLLRKGQP WSVLRKRIVQ MIADFLAGSS DVLVFVLWAG GLELTTMRYF VKIGAVKHCQ CGTVATCYNS
VSNDYCCFKH ALGCDYVYNP YVIDIQQWGY VGSLSTNHHA ICNVHRNEHV ASGDAIMTRC LAVYDCFVKN
VDWSITYPMI ANENAINKGG RTVQSHIMRA AIKLYNPKAI HDIGNPKGIR CAVTDAKWYC YDKNPINSNV
KTLEDDYMTH GQMDGLCLFW NCNVDMYPEF SIVCRFDTRT RSTLNLEGVN GGSLYVNNHA FHTPAYDKRA
MAKLKPAPFF YYDDGSCEVV HDQVNYVPLR ATNCITKCNI GGAVCSKHAN LYRAYVESYN IFTQAGFNIW
VPTTFDCYNL WQTFTEVNLQ GLENIAFNVV NKGSFVGADG ELPVAISGDK VFVRDGNTDN LVFVNKTSLP
TNIAFELFAK RKVGLTPPLS ILKNLGVVAT YKFVLWDYEA ERPLTSFTKS VCGYTDFAED VCTCYDNSIQ
GSYERFTLST NAVLFSATAV KTGGKSLPAI KLNFGMLNGN AIATVKSEDG NIKNINWFVY VRKDGKPVDH
YDGFYTQGRN LQDFLPRSTM EEDFLNMDIG VFIQKYGLED FNFEHVVYGD VSKTTLGGLH LLISQVRLSK
MGILKAEEFV AASDITLKCC TVTYLNDPSS KTVCTYMDLL LDDFVSVLKS LDLTVVSKVH EVIIDNKPWR
WMLWCKDNAV ATFYPQLQSA EWKCGYSMPG IYKTQRMCLE PCNLYNYGAG LKLPSGIMFN VVKYTQLCQY
FNSTTLCVPH NMRVLHLGAG SDYGVAPGTA VLKRWLPHDA IVVDNDVVDY VSDADFSVTG DCATVYLEDK
FDLLISDMYD GRTKAIDGEN VSKEGFFTYI NGFICEKLAI GGSIAIKVTE YSWNKKLYEL VQRFSFWTMF
CTSVNTSSSE AFVVGINYLG DFAQGPFIDG NIIHANYVFW RNSTVMSLSY NSVLDLSKFN CKHKATVVVQ
LKDSDINEMV LSLVRSGKLL VRGNGKCLSF SNHLVSTK
Publications
- Herold J, Siddell SG. (1993) An 'elaborated' pseudoknot is required for high frequency frameshifting during translation of HCV 229E polymerase mRNA. Nucleic Acids Res. 21(25):5838-5842. [abstract]
- Hatfield DL, Levin JG, Rein A, Oroszlan S. (1992) Translational suppression in retroviral gene expression. Adv Virus Res. 41:193-239. [abstract]