Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200213"

Accession numberr200213 [export]
Locus nameORF1-ORF2 (pol)
Recode1 namepol_m_vir_pea
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismPea enation mosaic virus-2 [details]
AcronymPEMV-2

Sequence

GenBank IDsU03563.1
SequencemRNA of 4253 nucleotides [sequence]
OrganisationComplex structure (1) [see structure]

Recoding event

Event type-1 Frameshifting (position: 923)
Descriptionproduction of fusion protein and set the ratio between two protein products. Accession no. U03563. PEMV is a naturally chimeric, two component virus. RNA1 is like genus Polerovirus (formerly luteovirus subgroup II) of the Luteoviridae. RNA2 resembles the Umbravirus genus.
GGGTATTTAT AGAGATCAGT ATGAACTGTG TCGCTAGGAT CAAGCGGTGG TTCACACCTG ACTTCACCCC TGGCGAGGGC GTGAAGTCTA GAGCTCAACT GGAAAGAGAG CTGGATCCCA CCTGGGCGCT TCTCGTGTGC CAAGAACGAG CGCGTCGTGA TGCTGACAGT ATTGCTAATG AGTGGTACGA GGGCAGCATG GAGTGCAACC TCCTTATCCC TCGGCCCACA ACCGAGGATG TATTTGGCCC CTCCATCGCC CCTGAGCCTG TGGCTCTAGT GGAGGAAACT ACCCGTTCCC GCGCGCCGTG CGTGGATGTC CCTGCCGAGG AGTCCTGTAA GTCAGCGGAG ATTGATCCTG TTGATCTCGC CAAGTTCGAC TCCCTCCATC GTCGCCTGTT GGCTGAAGCC AACCCTTGCA GGGAAATGGT TCTGTGGGTG CCTCCTGGCC TACCAGCAGA GCGCGACGTC CTGCCCAGGG CACGTGGGGT GATAATGATC CCCGAAGTCC CTGCCTCTGC ACATACCTTG TCCGTGAAGG TTATGGAGGC TGTGCGGTTG GCACAGGAAG TCTTGGCATC CCTTGCCAAG AGGGCCTTAG AGAAAAGGTC TACACCAACC CTTACCGCCC AGGCCCAGCC AGAGGCTACC CTGTCGGGGT GCGACTACCC GTATCAGGAG ACTGGAGCAG CAGCCGCGTG GATAACGCCT GGCTGCATTG CCATGGAGCT CAGAGCCAAA TTTGGCGTCT GCAAACGCAC CCCCGCAAAC TTAGAGATGG GGAGTCGCGT CGCCCGCGAG CTCCTGCGGG ATAACTGTGT CACTTGCAGG GAGACCACGT GGTACACCAG TGCCATTGCT GTGGACCTGT GGTTGACCCC GACCGTCGTC GACCTGGCCT GTGGTCGGCG CGCGGCGGAT TTTTGGTAGG GGCTGTGCTG CCTCGGCTGG GGGAAGACAC TAGTGTGCGG TTTGACAACC TGCACCCCAG CATCGAGGTA ATCAAGGCGG CTAGGCCCCG CCCAACCCAG AGGATGTCGT ACCAAATCGA CGTTGTGCGT CCTCTTGGAG ATTTTGGTGT GCACAACAAC TCCCTTGTCA ACCTAGCCAG GGGAATTAAT GAAAGGGTGT TCTACACGGA CAATGCTAGG ACAGAACCCC TTAAGCCTAA GGTTCCCTTC CCCTCATCAC GGGAGCTGAA AACCTTCAGA GTCACCCCTT GGACCATGGA TAGGGTTGTG GAGAGCTACA CTGGGTCCCA GCGCACTCGC TATGCTAATG CGCGGGACAG CATATTATCC AACCCACTGA GTCCTAAAGA TGCGCGGGTC AAGATGTTTG TCAAAGCTGA AAAGATAAAT TTCACAGCCA AACCTGACCC CGCCCCTCGT GTGATACAGC CTAGGGATCC ACGATCCAAC ATTGTCCTGG CTAAATACAT CAAGCCTTTG GAGCCAATGT TGTACAAAGC ACTGGGGAAA CTTTACAAGT ACCCCGCAGT TGCTAAGGGG TTTAACGCGG TTGAGACGGG GGAGATCATC GCCGGCAAGT GGCGGTGCTT CAAAGATCCT GTCGTCGTGG GATTAGACGC TTCCCGATTT GATCAGCATG TATCTGTCGA GGCGTTGCAG TTCACCCACG CGGTGTACAG AGGGTTCATC AAGTCACGGG AGTTTAACAA CCTCCTACAG ATGATGTACA CCAACCGTGG CCTAGGGTCC GCTAAGGACG GATTCGTCCG TTACAAGGTT AAAGGTAGAC GCATGAGCGG TGACATGGAC ACCTCCTTGG GCAACTGTGT GCTCATGGTG TTGCTCACCA GGAACCTTTG CAAGGTTCTA GGCATCCCGC ACGAGCTCTT CAACAATGGT GATGATTGCA TCGTCTTTTT CGATCGTTGC CACTTGGAGA AGTTCAACAA TGCTGTCAAG ACTTATTTTG CGGACCTAGG GTTTAAGATG AAGGTGGAAC CGCCGGTTGA CGTGTTGGAG AAAATAGAGT TCTGCCAAAC GCAGCCTATC TATGACGGGG AGAAGTGGCG CACCGTGCGT TGCATCTCGA GTATCGGAAA AGATTGCTCA TCCGTTATTA GTTGGGACCA ATTGGAGGGG TGGTGGAATG CCATCGCCCA GAGTGGTCTG GCTGTGTGTG GCGGAATGCC GATATACACG TCGTTCTACC GGTGGCTAGC ACGGGCCGGT AAGAGTGGGA CCAAGTGTCA GTCACACCCC TTGTGGAAAA ACGAGGGGTT GAATTGGTAC AGGATGGGGA TGGACCTTTC TCATGAGGTT AATGTTACCC CTCAGGCGCG CCTGTCTTTC TTCGCGGGTT TTGGTATTTC CCCCCCGATG CAGGTCGCCA TTGAGGCGCT GTATGACAAG CTGCCTCCAC CGTCCCCCCA CCATGGTCCT CCGGTTAAGG CTGTAACACA GCGAGTGTTC ACCAATTATT TCACGCCGGA AAGCGCCTGT GTTAGCATGA GCACGAATGA AGACAACAAA TCTGACTTTG CTGTTTACGG CCCTGTGCCT ACAGTGATGT CTCTTTGTGC TCAGTGTTAG GCTCTTAAAT TTTAGCGATG GCGTGACACG GTTACACCCT GAATTGACAG GGTACAGATC AAGGGAAGCC GGGGAGTCAC CAACCCACCC TGAATCGACA GGGCAAAAAG GGAAGCCGGG CACCGCCCAC GTGGAATCGA CCACGTCACC TTTTCGCGTC GACTATGCCG TCAACACCCT TTCGGCCCGC CAGCCTAGGA CAATGGCGGT AGGGAAATAT ATGACGATAA TCATTAATGT CAATAACGAC GAGCGCAAGC AACCAGAAGG AGCTACTGGC AGCTCTGTAC GGCGAGGTGA CAATAAAAGA ACTCGAGGAA ACAAACCTCG GAGTCATCAC CCCGGTTCGC GCGAACGAAA AGGTTACAAT CACCCCTCTC CTACCCCCAA AAACTCAAAG CAGGGTCAGC TCCGTACTGA AGCGGTTCAG GAGCACCCGA AACACGGGGG GACTGCTTTC CGTAGAGAAA GTGGTGGTAG TGTTCACCCC TCACATCCCC GACGACGTGC TAGGAGAGGT GGAGATATGG CTCCACGACA GCATCCTCCC CCACCTCGGG AGCGTCGGAC CAAGACTGAA ACTCAAGCTG AGCGAAGGGC CCAAGCTCTT AGCGTTCTAC CCACCCTACT CGATTGCATT GGGGGACTCG ATCTCGGGCC AGCCGAGGTC CTTCTCCATT GTCACCGAGC TGTTCGAAGG CAACTTCGCA CCGGGGTGCA GCCCATTCAG CCTGTTCCTC ATGTGGAGTC CACGCATCGA AGCAGTGACC CACAACTACT TGAGTCGTCC ACCACGTGCT CTGCCAATTT GCAGAACGAT GGTGCGGGAC GCGTTATCGG AGGTGGCATC CCAACAGCAA TACCTGAAGG GAGCGATGTC GAACAGGTAT GCCATGCCTC TCACTACGGG TGATGGCCAG CATAGAGCCA TGAAGGGGGC TCCCAGTGCC CTTCCACCAA CGGGGGTGTG TACCCAGGCT TCTAAGTGAG GCTTCGCTTC CCGCCGGAAG ACCGCGGCGG TTCTGTTCCT CCCACAGGAG TACGGCAACA ACCCACCTTG GGAAAGTGGG GATCCCAGCA CTAACTCCTT TAACTAGGCG GGCGTGTTGG TTACAGTACG AGGGGACAGT ACGCATTGAA ACTGAGCCCC ACCACAACTC TCATCCACAG GGTGGTTGGG ACGCAGGTGT CGGAGGGATC GCCAGCCCTC AGGATAGTGA GCTCCCGCAG AGGGATAAGC TGTCTCCCTG CGACGTAGTA GTAGAACACG TGGGATAGGG GATGACCTTG TCGACCGTTT GTCGGTCCCC TGCTCCTTAG AGCTGGCAAG GCGCCCATTG GTTCTACATT TCTACCAAAG TTGGTGGTGG ATGTCTCGCC CAAAAAGATC ATAAACGCGC GGGATAAGGC CCTCTCCACC TTCGCCGGGT AAGGCTAGAG TCAGCGCTGC ATGACTATAA CTTGCGGCCG ATCCAGTTGC ACGACTGGTG GTCCCCCCCA GTGTCTCGGT AGTCTGCCGA GTGGGCGGTG GTCGGATTCC ACCACACCCT GCCACGAGGT GCGTGGAGAC TTGGCCAGTC TAGGCTCGTC GTAATTAGTA GCAGCGACGT TAATCAACCC GTCCGGGCAT ACAATAGGAC CGGTTGTGCT TCTTCCTCTC CTTCTTAGCC AGGTGGTTAC CTCCCTGGCG CCC

Products

ProductORF1
MNCVARIKRW FTPDFTPGEG VKSRAQLERE LDPTWALLVC QERARRDADS IANEWYEGSM ECNLLIPRPT TEDVFGPSIA PEPVALVEET TRSRAPCVDV PAEESCKSAE IDPVDLAKFD SLHRRLLAEA NPCREMVLWV PPGLPAERDV LPRARGVIMI PEVPASAHTL SVKVMEAVRL AQEVLASLAK RALEKRSTPT LTAQAQPEAT LSGCDYPYQE TGAAAAWITP GCIAMELRAK FGVCKRTPAN LEMGSRVARE LLRDNCVTCR ETTWYTSAIA VDLWLTPTVV DLACGRRAAD FW
ProductORF1-ORF2
DescriptionRNA-dependent RNA polymerase
Modifications923..923:ribosomal_frameshift
MNCVARIKRW FTPDFTPGEG VKSRAQLERE LDPTWALLVC QERARRDADS IANEWYEGSM ECNLLIPRPT TEDVFGPSIA PEPVALVEET TRSRAPCVDV PAEESCKSAE IDPVDLAKFD SLHRRLLAEA NPCREMVLWV PPGLPAERDV LPRARGVIMI PEVPASAHTL SVKVMEAVRL AQEVLASLAK RALEKRSTPT LTAQAQPEAT LSGCDYPYQE TGAAAAWITP GCIAMELRAK FGVCKRTPAN LEMGSRVARE LLRDNCVTCR ETTWYTSAIA VDLWLTPTVV DLACGRRAAD FLVGAVLPRL GEDTSVRFDN LHPSIEVIKA ARPRPTQRMS YQIDVVRPLG DFGVHNNSLV NLARGINERV FYTDNARTEP LKPKVPFPSS RELKTFRVTP WTMDRVVESY TGSQRTRYAN ARDSILSNPL SPKDARVKMF VKAEKINFTA KPDPAPRVIQ PRDPRSNIVL AKYIKPLEPM LYKALGKLYK YPAVAKGFNA VETGEIIAGK WRCFKDPVVV GLDASRFDQH VSVEALQFTH AVYRGFIKSR EFNNLLQMMY TNRGLGSAKD GFVRYKVKGR RMSGDMDTSL GNCVLMVLLT RNLCKVLGIP HELFNNGDDC IVFFDRCHLE KFNNAVKTYF ADLGFKMKVE PPVDVLEKIE FCQTQPIYDG EKWRTVRCIS SIGKDCSSVI SWDQLEGWWN AIAQSGLAVC GGMPIYTSFY RWLARAGKSG TKCQSHPLWK NEGLNWYRMG MDLSHEVNVT PQARLSFFAG FGISPPMQVA IEALYDKLPP PSPHHGPPVK AVTQRVFTNY FTPESACVSM STNEDNKSDF AVYGPVPTVM SLCAQC

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