Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200214"

Accession numberr200214 [export]
Locus nameorf1a-orf1b
Recode1 namepol_m_vir_porc
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismPorcine respiratory and reproductive syndrome virus [details]
AcronymPRRSV

Sequence

GenBank IDsAF046869.1
SequenceRNA of 11882 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]

Recoding event

Event type-1 Frameshifting (position: 7,506)
Descriptionproduction of fusion protein and set the ratio between two protein products.
ATGTCTGGGA TACTTGATCG GTGCACGTGT ACCCCCAATG CCAGGGTGTT TGTGGCGGAG GGCCAAGTCT ACTGCACACG ATGTCTCAGT GCACGGTCTC TCCTTCCCCT GAACCTCCAA GTTTCTGAGC TCGGGGTGCT AGGCCTGTTC TACAGGCCCG AAGAGCCACT CCGGTGGACG TTGCCACGTG CATTCCCCAC TGTTGAGTGC TCCCCCGCTG GGGCCTGCTG GCTTTCTGCA ATCTTTCCAA TCGCACGAAT GACCAGTGGA AACCTGAACT TCCAACAAAG AATGGTACGG GTCGCAGCTG AGATTTACAG AGCCGGCCAG CTCACCCCTG CAGTCTTGAA GGCTCTACAA GTTTATGAAC GGGGTTGCCG CTGGTACCCC ATTGTTGGAC CTGTCCCTGG AGTGGCCGTT TTCGCCAATT CCCTACATGT GAGTGATAAA CCTTTCCCGG GAGCAACTCA CGTGTTGACC AACCTGCCGC TCCCGCAGAG ACCCAAGCCT GAGGACTTTT GCCCCTTTGA GTGTGCTATG GCTACTGTCT ATGACATTGG TCATGACGCC GTCATGTATG TGGCCGAAGG GAAAATCTCC TGGGCCCCTC GTGGCGGGGA TGAAGTGAAA TTTGAAGCTG TCCCCGGGGA GTTGAAGTTG ATTGCGAACC GGCTCCGCAC CTCCTTCCCG CCCCACCACG CAGTGGACAT GTCTAAGTTC GCCTTCACAG CCCCTGGGTG TGGTGTTTCT ATGCGGGTCG AACGCCAACA CGGCTGCCTT CCCGCTGACA CTGTCCCTGA AGGCAACTGC TGGTGGAGCT TGTTTGACTT GCTCCCACTG GAAGTTCAGG ACAAAGAAAT TCGCCATGCT AACCAATTTG GCTACCAGAC CAAGCATGGT GTCTCTGGCA AGTACCTACA GCGGAGGCTG CAAGTTAATG GTCTCCGAGC AGTAACTGAC TCAAACGGAC CTATCGTCGT GCAATACTTC TCCGTCAAGG AGAGTTGGAT CCGCCATTTG AAACTGGCGG GAGAACCCAG CTACTCTGGG TTTGAGGACC TCCTCAGAAT AAGGGTTGAG CCTAACACAT CGCCATTGGC TAACACGGAA GGAAAGATTT TCCGGTTTGG CAGTCACAAG TGGTACGGCG CTGGAAAGAG AGCAAGAAAA GCACGCTCTT GTGCGACTGC TACAGTCGCT GGCCGCGCTT TGTCCGTTCG TGAAACCCGG CAGGCCAAGG AGCATGAGGT TGCCGGCGCC GACAAGGCTG AGCACCTCAA ACACTACTCC CCGCCTGCCG AAGGGAATTG TGGTTGGCAC TGCATTTCCG CCATCGCCAA CCGGATGGTG AATTCCATCT TTGAAACCAC CCTTCCCGAA AGAGTGAGGC CCCCAGATGA CTGGGCTACT GACGATGATC TTGCGAATGC CATCCAAATC CTCAGACTCC CTGCAGCCTT AGACAGGAAC GGTGCTTGTA CAAGCGCCAA GTACGTACTT AAGCTAGAAG GTGAGCATTG GACTGTCACT GTGACCCCTG GGATGTCCCC TTCTTTGCTC CCTCTTGAAT GTGTTCAGGG CTGTTGTGAG CACAAGGGCG GTCTTGGTTC CCCAGATGCA ATCGAGGTCT CTGGATTTGA CCCTGCCTGC CTTGACTGGC TGGCTGAGGT GATGCACCTG CCTAGCAGTG CTATCCCAGC CGCTCTGGCC GAAATGTCTG GCGATTCCGA TCGTTCGGCT TCTCCGGTCA CCACCGTGTG GACTGTTTCG CAGTTCTTTG CCCGTCACAG CGGAGGGAAT CACCCTGACC AAGTGCGCTT AGGGAAAATT ATCAGTCTCT GTCAGGTGAT TGAGGACTGC TGCTGTTCCC AGAACAAAAC CAACCGGGTC ACCCCGGAGG AGGTCGCAGC AAAGATTGAC CTGTACCTCC GTGGCGCAAC AAATCTTGAA GAATGCTTGG CCAGGCTTGA GAAAGCGCGC CCGCCGCGCG TAATCGACAC CTCCTTTGAT TGGGATGTTG TGCTCCCTGG GGTTGAGGCG GCAACCCAAA CAAACAAGCT GCCCCAGGTC AACCAGTGTC GTGCTCTGGT CCCTGTTGTG ACTCAAAAGT CCTTGGACAA CAACTCGGTC CCCCTGACCG CCTTTTCACT GGCTAACTAC TACTACCGTG CGCAAGGTGA CGAAGTTCGT CACCGTGAAA GACTAACCGC CGTGCTCTCC AAGTTGGAAG AGGTTGTTCG AGAAGAATAT GGGCTCATGC CAACCGAGCC TGGTCCACGG CCCACACTGC CACGCGGGCT CGACGAACTC AAAGACCAGA TGGAGGAGGA CTTGCTGAGA CTGGCTAACG CCCAGGCGAC TTCGGACATG ATGGCATGGG CAGTCGAGCA GGTTGACCTA AAAACTTGGG TCAAGAACTA CCCGCGGTGG ACACCACCAC CCCCTCCGCC AAAAGTTCAG CCTCGAAAAA CGAAGCCTGT CAAGAGCTTG CCGGAGAGAA AGCCTGTCCC CGCTCCGCGC AGGAAGGTTG GGCCCGATTG TGGCAGCCCG GTTTCATTAG GCGGCGATGT CCCTAACAGT TGGGAAGATT TGGCTGTTAG TAGCCCCTTG GATCTCCCGA CCCCACCTGA GCCGGCAACA CTTTCAAGTG AGCTAGTGAT TGTGTCCTCA CCGCAATGCA TCTTTAGGCC GGCGACACCC TTGAGTGAGC CGGCTCCAAT TCCCGCACCT CGCGGAACTG TGTCTCGACC GGTGACACCC TTGAGTGAGC CGATCCCTGT GCCCGCACCG CGGCGTAAGT TTCAGCAGGT GAAAAGATTG AGTTCGGCGG CGGCAGTCCC ACTGCACCAG AACGAGCCCC TGGATTTGTC TGCTTCCTCA CAGACTGAAT ATGAGGCCTC CCCCTCAGCG CCGCCGCAGA GCGGGGGCGT TCTGGGAGTA GAGGGGCATG AAGCTGAGGA AACCCTGAGT GAAATCTCGG ACATGTCGGG TAACATTAAA CCTGCGTCCG TGTCATCAAG CAGCTCCTTG TCCAGCGTGG AAATCACACG CCCAAAATAC TCAGCTCAAG CCATCATCGA CTCGGGCGGG CCCTGCAGTG GGCATCTCCA AGGGGTAAAG GAAACATGCC TTAGTGTCAT GCGCGAGGCA TGTGATGCGA CTAAGCTTGA TGACCCTGCT ACGCAGGAAT GGCTTTCTCG CATGTGGGAT CGGGTGGACA TGCTGACTTG GCGCAACACG TCTGTTTGCC AGGCGATTCG CACCTTAGAT GGCAGGTTAA AGTTCCTCCC AAAAATGATA CTCGAGACAC CGCCGCCCTA TCCGTGTGAG TTTGTGATGA TGCCTCACAC GCCTGCACCT TCCGTAGGTG CGGAGAGTGA CCTTACCATT GGCTCAGTTG CTACTGAAGA TGTTCCACGC ATCCTCGAGA AAATAGAAAA TGTCGGCGAG ATGGCCAACC AGGAACCCTC GGCCTTCTCC GAGGATAAAC CGGTAGATGA CCAGCTTGTC AACGACCCCC GGATATCGTC GCGGAGGCCT GACGAGAGCA CAGCAGCTCC GTCTGCAGGC ACAGGTGGCG CCGGCTCTTT TACCGATTTG CCGTCTTCAG ATGGCGCGGA TGCGGACGGG GGGGGGCCGT TTCGGACGGC AAAAAGAAAA GCTGAAAGGC TCTTTGATCA ACTGAGCCGT CAGGTTTTTG ACCTCGTCTC CCATCTCCCT GTTTTCTTCT CACGCCTTTT CCACCCTGGC GGTGGTTATT CTACGGGTGA TTGGGGTTTT GCAGCTTTTA CTCTATTGTG CCTCTTTTTA TGTTACAGTT ACCCAGCCTT TGGCATTGCT CCCCTCTTGG GTGTGTTTTC TGGGACTTCT CGGCGCGTTC GAATGGGGGT TTTTGGCTGC TGGTTGGCTT TTGCTGTTGG TCTGTTCAAG CCTGTGTCCG ACCCAGTCGG CGCTGCTTGT GAGTTTGACT CGCCAGAGTG TAGAAATATC CTTCTTTCTT TTGAGCTTCT CAAACCTTGG GACCCTGTTC GCAGCCTTGT TGTGGGCCCC GTCGGTCTCG GTCTTGCCAT TCTTGGCAGG TTACTGGGCG GGGCACGCTG CATCTGGCAC TTTTTGCTTA GGCTTGGCAT TGTTGCAGAC TGTATCTTGG CTGGAGCTTA CGTGCTTTCT CAAGGCAGGT GTAAAAAGTG CTGGGGATCT TGTATAAGAA CTGCTCCTAA TGAGGTCGCT TTTAACGTGT TCCCTTTCAC ACGTGCGACC AGATCGTCAC TTATCGACCT GTGCGATCGG TTTTGTGCGC CAAAAGGAAT GGACCCCATT TTTCTCGCCA CTGGGTGGCG CGGATGCTGG GCCGGCCGAA GCCCCATTGA GCAACCCTCT GAAAAACCCA TCGCGTTTGC TCAATTGGAT GAAAAGAAGA TTACGGCTAG AACTGTGGTC GCCCAGCCTT ATGACCCCAA CCAAGCCGTA AAGTGCTTGC GGGTATTGCA GGCGGGTGGG GCGATGGTGG CTGAGGCGGT CCCAAAAGTG GTCAAGGTTT CCGCTGTTCC ATTCCGAGCC CCCTTCTTTC CCACTGGAGT GAAAGTTGAC CCTGATTGCA GGGTCGTAGT CGACCCTGAC ACTTTCACTG CAGCTCTCCG GTCTGGCTAC TCCACCACAA ACCTCGTCCT TGGTGTAGGG GACTTTGCCC AGCTGAATGG ATTAAAAATC AGGCAAATTT CCAAGCCTTC AGGGGGAGGC CCACATCTCA TGGCTGCCTT GCATGTTGCC TGCTCGATGG CTCTGCACAT GCTTACTGGG ATTTATGTGA CTGCGGTGGG TTCTTGCGGC ACCGGCACCA ACGACCCGTG GTGCGCTAAC CCGTTTGCCG TCCCTGGCTA CGGACCTGGC TCTCTGTGCA CGTCCAGATT GTGCATTTCC CAACACGGCC TTACCCTGCC CTTGACAGCA CTTGTGGCGG GATTCGGCAT TCAAGAAATT GCCTTGGTCG TTTTGATTTT TGTTTCCATC GGAGGCATGG CTCATAGGTT GAGCTGTAAG GCTGACATGC TGTGCATTTT GCTTGCAATT GCCAGCTATG TTTGGGTACC TCTCACCTGG TTGCTTTGTG TGTTTCCTTG CTGGTTGCGC TGTTTTTCTT TGCACCCCCT CACCATCCTA TGGTTGGTGT TTTTCTTGAT TTCTGTGAAT ATGCCTTCAG GAATCTTGGC CATGGTGTTG TTGGTTTCTC TTTGGCTTCT TGGTCGCTAT ACTAATGTTG CTGGCCTTGT CACCCCCTAC GACATTCATC ATTACACCAG TGGCCCCCGC GGTGTTGCCG CCTTGGCTAC CGCACCAGAT GGGACCTACT TGGCCGCTGT CCGCCGCGCT GCGTTGACTG GCCGCACCAT GCTGTTTACC CCGTCCCAGC TTGGGTCTCT TCTTGAGGGT GCTTTCAGAA CTCGAAAGCC CTCACTGAAC ACCGTCAATG TGATCGGGTC CTCCATGGGC TCTGGCGGGG TGTTTACCAT CGACGGGAAG GTCAAGTGCG TAACTGCCGC ACATGTCCTT ACGGGCAATT CAGCTCGGGT CTCCGGGGTC GGCTTCAATC AAATGCTTGA CTTTGACGTA AAGGGAGATT TCGCTATAGC TGATTGCCCG AATTGGCAAG GGGCTGCCCC CAAGGCCCAA TTCTGCGCGG ATGGATGGAC TGGCCGTGCC TATTGGCTAA CATCCTCTGG CGTCGAACCC GGCGTCATTG GAAAAGGATT CGCCTTCTGC TTCACCGCAT GTGGCGATTC CGGGTCCCCA GTGATCACCG AGGCCGGTGA GCTTGTCGGC GTTCACACGG GATCGAATAA ACAAGGGGGG GGCATTGTTA CGCGCCCCTC AGGCCAGTTT TGTAATGTGG CACCCATCAA GCTAAGCGAA TTAAGTGAAT TCTTTGCTGG GCCTAAGGTC CCGCTCGGTG ATGTGAAGGT CGGCAGCCAC ATAATTAAAG ACATAAGCGA GGTGCCTTCA GATCTTTGTG CCTTGCTTGC TGCCAAACCT GAACTGGAAG GAGGCCTCTC CACCGTCCAA CTTCTTTGTG TGTTTTTTCT CCTGTGGAGA ATGATGGGAC ATGCCTGGAC GCCCTTGGTT GCTGTGAGTT TCTTTATTTT GAATGAGGTT CTCCCAGCCG TCCTGGTCCG GAGTGTTTTC TCCTTTGGAA TGTTTGTGCT CTCCTGGCTC ACGCCATGGT CTGCGCAAAT TCTGATGATC AGGCTTCTGA CAGCAGCCCT TAACAGGAAC AGATGGTCAC TTGCCTTTTT CAGCCTCGGT GCAGTGACCG GTTTTGTCGC AGATCTTGCG GCCACTCAGG GGCATCCGTT GCAGGCAGTG ATGAATTTGA GCACCTATGC ATTCCTGCCT CGGATGATGG TTGTGACCTC ACCAGTCCCA GTGATCACGT GTGGTGTCGT GCACCTACTT GCCATCATTT TGTACTTGTT TAAGTACCGT GGCCTGCACC AGATCCTTGT TGGCGATGGA GTGTTCTCTG CGGCTTTCTT CTTGAGATAC TTTGCCGAGG GAAAGTTGAG GGAAGGGGTG TCGCAATCCT GCGGAATGAA CCATGAGTCT CTGACTGGTG CCCTCGCTAT GAGACTCAAT GACGAGGACT TGGATTTCCT TATGAAATGG ACTGATTTTA AGTGCTTTGT TTCTGCGTCC AACATGAGGA ATGCAGCGGG TCAATTTATC GAGGCTGCCT ATGCTAAAGC ACTTAGAGTA GAACTGGCCC AGTTGGTGCA GGTTGATAAA GTTCGAGGAG TTTTGGCCAA ACTTGAAGCT TTTGCTGATA CCGTGGCACC TCAACTCTCG CCCGGTGACA TTGTTGTCGC TCTCGGCCAC ACGCCTGTTG GCAGTATCTT CGACCTAAAG GTTGGTAGCA CCAAGCATAC CCTCCAAGCC ATTGAGACTA GAGTCCTTGC TGGGTCCAAA ATGACCGTGG CGCGCGTCGT CGATCCGACC CCCACGCCCC CACCCGCACC CGTGCCCATT CCCCTCCCAC CGAAAGTTCT GGAGAATGGC CCCAACGCTT GGGGGGATGA GGACCGTTTG AATAAGAAGA AGAGGCGCAG GATGGAAGCC CTCGGCATCT ATGTTATGGG CGGGAAAAAG TACCAGAAAT TTTGGGACAA GAATTCCGGT GATGTGTTTT ATGAGGAGGT CCATAACAAC ACAGATGAGT GGGAGTGTCT CAGAGTTGGC GACCCTGCTG ACTTTGACCC TGAGAAGGGA ACTCTGTGTG GACATGTCAC CATTGAAAAC AAGGCTTACC ATGTTTACAT CTCCCCATCT GGTAAGAAGT TCTTGGTCCC CGTCAACCCA GAGAATGGAA GAGTCCAATG GGAAGCTGCA AAGCTTTCCA TGGAGCAGGC CCTAGGTATG ATGAATGTCG ACGGCGAACT GACTGCCAAA GAACTGGAGA AACTGAAAAG AATAATTGAC AAACTCCAGG GCCTGACTAA GGAGCAGTGT TTAAACTGCT AGCCGCCAGC GGCTTGACCC GCTGTGGTCG CGGCGGCTTG GTTGTTACTG AGACAGCGGT AAAAATAGTC AAATTTCACA ACCGGACCTT CACCCTGGGA CCTGTGAATT TAAAAGTGGC CAGTGAGGTT GAGCTAAAAG ACGCGGTTGA GCACAACCAA CACCCGGTTG CGAGACCGAT CGATGGTGGA GTTGTGCTCC TGCGTTCCGC GGTTCCTTCG CTTATAGACG TCTTGATCTC CGGTGCTGAT GCATCTCCCA AGTTACTTGC CCATCATGGG CCGGGAAACA CTGGGATCGA TGGCACGCTC TGGGATTTTG AGTCCGAAGC CACTAAAGAG GAAGTCGCAC TCAGTGCGCA AATAATACAG GCTTGTGACA TCAGGCGCGG CGATGCTCCT AAAATTGGTC TCCCTTACAA ACTGTACCCT GTTAGGGGTA ACCCTGAGCG GGTGAAAGGA GTTCTGCAGA ATACAAGGTT TGGAGACATA CCTTACAAAA CCCCCAGTGA CACTGGAAGC CCAGTGCACG CGGCTGCCTG CCTTACGCCC AACGCCACTC CGGTGACTGA CGGGCGCTCC GTCTTGGCCA CGACCATGCC CCCCGGGTTT GAGTTATATG TACCGACCAT ACCAGCGTCT GTCCTTGATT ACCTTGACTC TAGGCCTGAC TGCCCAAAAC AGCTGACAGA GCACGGCTGC GAAGATGCCG CACTGAAAGA CCTCTCTAAA TATGACTTGT CCACCCAAGG CTTTGTTTTA CCTGGAGTCC TTCGCCTTGT GCGGAAATAC CTGTTTGCCC ATGTAGGTAA GTGCCCACCC GTTCATCGGC CTTCTACTTA CCCTGCTAAG AATTCTATGG CTGGGATAAA TGGGAACAGG TTCCCAACCA AGGACATTCA GAGCGTCCCT GAAATCGACG TTCTGTGCGC ACAGGCTGTG CGAGAAAACT GGCAAACTGT CACCCCTTGT ACTCTCAAGA AACAGTATTG CGGGAAGAAG AAGACTAGGA CCATACTCGG CACCAATAAC TTCATCGCAC TAGCCCACCG AGCAGCGTTG AGTGGTGTTA CCCAGGGTTT CATGAAAAAG GCGTTTAACT CTCCCATCGC CCTCGGAAAG AACAAGTTCA AGGAGCTACA GACTTCGGTC CTGGGCAGGT GCCTTGAAGC TGATCTCGCA TCCTGCGATC GATCCACGCC TGCAATTGTC CGCTGGTTTG CCGCCAACCT TCTTTATGAA CTTGCCTGTG CTGAAGAGCA TCTACCGTCG TACGTGCTGA ACTGCTGCCA CGACTTACTG GTCACGCAGT CCGGCGCGGT GACTAAGAGA GGTGGCCTGT CGTCTGGCGA CCCGATCACC TCTGTGTCTA ACACCATTTA TAGTTTGGTG ATCTATGCAC AGCATATGGT GCTTAGTTAC TTCAAGAGTG GTCACCCCCA TGGCCTCCTG TTCTTACAAG ACCAGCTGAA GTTTGAGGAC ATGCTCAAGG TCCAACCCCT GATCGTCTAT TCGGACGACC TCGTGCTGTA TGCCGAGTCT CCCACCATGC CAAACTATCA CTGGTGGGTT GAACATCTGA ATTTGATGCT GGGGTTTCAG ACGGACCCAA AGAAGACAGC AATAACAGAC TCGCCATCAT TTCTAGGCTG TAGAATAATA AATGGGCGCC AGCTAGTCCC CAACCGTGAC AGGATCCTCG CGGCCCTCGC CTATCACATG AAGGCGAGCA ATGTTTCTGA ATACTATGCC TCAGCGGCTG CAATACTCAT GGACAGCTGT GCTTGTTTGG AGTATGATCC TGAATGGTTT GAAGAACTTG TAGTCGGAAT AGCGCAGTGC GCCCGCAAGG ACGGCTACAG CTTTCCCGGC ACGCCGTTCT TCATGTCCAT GTGGGAGAAA CTCAGGTCCA ATTATGAGGG GAAGAAGTCG AGAGTGTGCG GGTACTGCGG GGCCCCGGCC CCGTACGCTA CTGCCTGTGG CCTCGACGTC TGCATTTACC ACACCCACTT CCACCAGCAT TGTCCAGTCA CAATCTGGTG TGGTCATCCA GCGGGTTCTG GTTCTTGTAG TGAGTGCAAA TCCCCTGTAG GGAAAGGCAC AAGCCCTTTA GACGAAGTGC TGGAACAAGT CCCGTATAAG CCCCCACGGA CCGTCATCAT GCATGTGGAG CAGGGTCTCA CCCCCCTTGA TCCAGGTAGA TACCAAACTC GCCGCGGATT AGTCTCTGTC AGGCGTGGAA TTAGGGGAAA TGAAGTTGAA CTACCAGACG GTGATTATGC TAGCACCGCC TTGCTCCCTA CCTGCAAAGA GATCAACATG GTCGCTGTCG CTTCCAATGT ATTGCGCAGC AGGTTCATCA TCGGCCCACC CGGTGCTGGG AAAACATACT GGCTCCTTCA ACAGGTCCAG GATGGTGATG TTATTTACAC ACCAACTCAC CAGACCATGC TTGACATGAT TAGGGCTTTG GGAACGTGCC GGTTCAACGT CCCGGCTGGC ACAACGCTGC AATTCCCCGT CCCCTCCCGC ACCGGTCCGT GGGTTCGCAT CCTAGCCGGC GGTTGGTGTC CTGGCAAGAA TTCCTTCCTA GATGAAGCAG CGTATTGCAA CCACCTTGAT GTTTTGAGGC TTCTTAGTAA AACTACCCTC ACCTGTCTAG GAGACTTCAA GCAACTCCAC CCAGTGGGTT TTGACTCTCA TTGCTATGTT TTTGACATCA TGCCTCAAAC TCAACTGAAG ACCATCTGGA GGTTTGGACA GAATATCTGT GATGCCATTC AGCCAGATTA CAGGGACAAA CTCATGTCTA TGGTCAACAC AACCCGTGTG ACCTACGTGG AAAAACCTGT CAGGTATGGG CAGGTCCTCA CCCCCTACCA CAGGGACCGA GAGGACGACG CCATCACTAT TGATTCCAGT CAAGGTGCCA CATTCGATGT GGTTACATTG CATTTGCCCA CTAAAGATTC ACTCAACAGG CAAAGAGCCC TTGTTGCCAT CACCAGGGCA AGACACGCTA TCTTTGTGTA TGACCCGCAC AGGCAGCTGC AGGGCCTGTT TGATCTTCCT GCAAAAGGCA CACCCGTCAA CCTCGCAGTG CACCGCGACG GGCAGCTGAT CGTGCTGGAT AGAAATAACA AAGAATGCAC GGTTGCTCAG GCTCTAGGCA ACGGGGATAA ATTTAGGGCC ACAGATAAGC GCGTTGTAGA TTCTCTCCGC GCCATTTGTG CTGACCTAGA AGGGTCGAGC TCTCCGCTCC CCAAGGTCGC ACACAACTTG GGATTTTATT TCTCACCTGA TTTAACACAG TTTGCTAAAC TCCCAGTAGA ACTTGCACCT CACTGGCCCG TGGTGACAAC CCAGAACAAT GAAAAGTGGC CAGATCGGCT GGTTGCCAGC CTTCGCCCTA TCCACAAATA CAGCCGCGCG TGCATCGGTG CCGGCTATAT GGTGGGCCCT TCGGTGTTTC TAGGCACTCC TGGGGTCGTG TCATACTATC TCACAAAATT TGTTAAGGGC GAGGCTCAAT TGCTTCCGGA GACGGTTTTC AGCACCGGCC GAATTGAGGT AGACTGCCGG GAATATCTTG ATGATCGGGA GCGAGAAGTT GCTGCGTCCC TCCCACACGC CTTCATTGGC GACGTCAAAG GCACTACCGT TGGAGGATGT CATCATGTCA CCTCCAGATA CCTCCCGCGC GTCCTTCCCA AGGAATCAGT TGCGGTAGTC GGGGTTTCAA GCCCCGGAAA AGCCGCGAAA GCATTGTGCA CACTGACAGA TGTGTACCTC CCAGATCTTG AAGCCTATCT CCACCCGGAG ACCCAGTCCA AGTGCTGGAA AATGATGTTG GACTTCAAAG AAGTTCGACT AATGGTCTGG AGAGACAAAA CAGCCTATTT CCAACTTGAA GGTCGCTATT TCACCTGGTA TCAGCTTGCC AGCTATGCCT CGTACATCCG TGTTCCTGTC AACTCTACGG TGTACTTGGA CCCCTGCATG GGCCCCGCCC TTTGCAACAG GAGAGTCGTC GGGTCCACCC ACTGGGGGGC TGACCTCGCG GTTACCCCTT ATGATTACGG CGCTAAAATC ATCCTGTCTA GCGCGTACCA TGGTGAAATG CCCCCCGGAT ACAAAATTCT GGCGTGCGCG GAGTTCTCGT TGGATGACCC AGTTAGGTAC AAACACACTT GGGGGTTTGA ATCGGATACA GCGTATCTGT ATGAGTTCAC CGGAAACGGT GAGGACTGGG AGGATTACAA TGATGCGTTT CGTGCGCGCC AGGAAGGGAA AATTTACAAG GCCACTGCCA CCAGCTTGAA GTTTCATTTT CCCCCGGGCC CTGTCATTGA ACCAACTTTA GGCCTGAATT GA

Products

Productorf1a
Descriptiongag capsid polyprotein
MSGILDRCTC TPNARVFVAE GQVYCTRCLS ARSLLPLNLQ VSELGVLGLF YRPEEPLRWT LPRAFPTVEC SPAGACWLSA IFPIARMTSG NLNFQQRMVR VAAEIYRAGQ LTPAVLKALQ VYERGCRWYP IVGPVPGVAV FANSLHVSDK PFPGATHVLT NLPLPQRPKP EDFCPFECAM ATVYDIGHDA VMYVAEGKIS WAPRGGDEVK FEAVPGELKL IANRLRTSFP PHHAVDMSKF AFTAPGCGVS MRVERQHGCL PADTVPEGNC WWSLFDLLPL EVQDKEIRHA NQFGYQTKHG VSGKYLQRRL QVNGLRAVTD SNGPIVVQYF SVKESWIRHL KLAGEPSYSG FEDLLRIRVE PNTSPLANTE GKIFRFGSHK WYGAGKRARK ARSCATATVA GRALSVRETR QAKEHEVAGA DKAEHLKHYS PPAEGNCGWH CISAIANRMV NSIFETTLPE RVRPPDDWAT DDDLANAIQI LRLPAALDRN GACTSAKYVL KLEGEHWTVT VTPGMSPSLL PLECVQGCCE HKGGLGSPDA IEVSGFDPAC LDWLAEVMHL PSSAIPAALA EMSGDSDRSA SPVTTVWTVS QFFARHSGGN HPDQVRLGKI ISLCQVIEDC CCSQNKTNRV TPEEVAAKID LYLRGATNLE ECLARLEKAR PPRVIDTSFD WDVVLPGVEA ATQTNKLPQV NQCRALVPVV TQKSLDNNSV PLTAFSLANY YYRAQGDEVR HRERLTAVLS KLEEVVREEY GLMPTEPGPR PTLPRGLDEL KDQMEEDLLR LANAQATSDM MAWAVEQVDL KTWVKNYPRW TPPPPPPKVQ PRKTKPVKSL PERKPVPAPR RKVGPDCGSP VSLGGDVPNS WEDLAVSSPL DLPTPPEPAT LSSELVIVSS PQCIFRPATP LSEPAPIPAP RGTVSRPVTP LSEPIPVPAP RRKFQQVKRL SSAAAVPLHQ NEPLDLSASS QTEYEASPSA PPQSGGVLGV EGHEAEETLS EISDMSGNIK PASVSSSSSL SSVEITRPKY SAQAIIDSGG PCSGHLQGVK ETCLSVMREA CDATKLDDPA TQEWLSRMWD RVDMLTWRNT SVCQAIRTLD GRLKFLPKMI LETPPPYPCE FVMMPHTPAP SVGAESDLTI GSVATEDVPR ILEKIENVGE MANQEPSAFS EDKPVDDQLV NDPRISSRRP DESTAAPSAG TGGAGSFTDL PSSDGADADG GGPFRTAKRK AERLFDQLSR QVFDLVSHLP VFFSRLFHPG GGYSTGDWGF AAFTLLCLFL CYSYPAFGIA PLLGVFSGTS RRVRMGVFGC WLAFAVGLFK PVSDPVGAAC EFDSPECRNI LLSFELLKPW DPVRSLVVGP VGLGLAILGR LLGGARCIWH FLLRLGIVAD CILAGAYVLS QGRCKKCWGS CIRTAPNEVA FNVFPFTRAT RSSLIDLCDR FCAPKGMDPI FLATGWRGCW AGRSPIEQPS EKPIAFAQLD EKKITARTVV AQPYDPNQAV KCLRVLQAGG AMVAEAVPKV VKVSAVPFRA PFFPTGVKVD PDCRVVVDPD TFTAALRSGY STTNLVLGVG DFAQLNGLKI RQISKPSGGG PHLMAALHVA CSMALHMLTG IYVTAVGSCG TGTNDPWCAN PFAVPGYGPG SLCTSRLCIS QHGLTLPLTA LVAGFGIQEI ALVVLIFVSI GGMAHRLSCK ADMLCILLAI ASYVWVPLTW LLCVFPCWLR CFSLHPLTIL WLVFFLISVN MPSGILAMVL LVSLWLLGRY TNVAGLVTPY DIHHYTSGPR GVAALATAPD GTYLAAVRRA ALTGRTMLFT PSQLGSLLEG AFRTRKPSLN TVNVIGSSMG SGGVFTIDGK VKCVTAAHVL TGNSARVSGV GFNQMLDFDV KGDFAIADCP NWQGAAPKAQ FCADGWTGRA YWLTSSGVEP GVIGKGFAFC FTACGDSGSP VITEAGELVG VHTGSNKQGG GIVTRPSGQF CNVAPIKLSE LSEFFAGPKV PLGDVKVGSH IIKDISEVPS DLCALLAAKP ELEGGLSTVQ LLCVFFLLWR MMGHAWTPLV AVSFFILNEV LPAVLVRSVF SFGMFVLSWL TPWSAQILMI RLLTAALNRN RWSLAFFSLG AVTGFVADLA ATQGHPLQAV MNLSTYAFLP RMMVVTSPVP VITCGVVHLL AIILYLFKYR GLHQILVGDG VFSAAFFLRY FAEGKLREGV SQSCGMNHES LTGALAMRLN DEDLDFLMKW TDFKCFVSAS NMRNAAGQFI EAAYAKALRV ELAQLVQVDK VRGVLAKLEA FADTVAPQLS PGDIVVALGH TPVGSIFDLK VGSTKHTLQA IETRVLAGSK MTVARVVDPT PTPPPAPVPI PLPPKVLENG PNAWGDEDRL NKKKRRRMEA LGIYVMGGKK YQKFWDKNSG DVFYEEVHNN TDEWECLRVG DPADFDPEKG TLCGHVTIEN KAYHVYISPS GKKFLVPVNP ENGRVQWEAA KLSMEQALGM MNVDGELTAK ELEKLKRIID KLQGLTKEQC LNC
Productorf1a-orf1b
Descriptiongag capsid polyprotein, RNA polymerase
Modifications7506..7506:ribosomal_frameshift
MSGILDRCTC TPNARVFVAE GQVYCTRCLS ARSLLPLNLQ VSELGVLGLF YRPEEPLRWT LPRAFPTVEC SPAGACWLSA IFPIARMTSG NLNFQQRMVR VAAEIYRAGQ LTPAVLKALQ VYERGCRWYP IVGPVPGVAV FANSLHVSDK PFPGATHVLT NLPLPQRPKP EDFCPFECAM ATVYDIGHDA VMYVAEGKIS WAPRGGDEVK FEAVPGELKL IANRLRTSFP PHHAVDMSKF AFTAPGCGVS MRVERQHGCL PADTVPEGNC WWSLFDLLPL EVQDKEIRHA NQFGYQTKHG VSGKYLQRRL QVNGLRAVTD SNGPIVVQYF SVKESWIRHL KLAGEPSYSG FEDLLRIRVE PNTSPLANTE GKIFRFGSHK WYGAGKRARK ARSCATATVA GRALSVRETR QAKEHEVAGA DKAEHLKHYS PPAEGNCGWH CISAIANRMV NSIFETTLPE RVRPPDDWAT DDDLANAIQI LRLPAALDRN GACTSAKYVL KLEGEHWTVT VTPGMSPSLL PLECVQGCCE HKGGLGSPDA IEVSGFDPAC LDWLAEVMHL PSSAIPAALA EMSGDSDRSA SPVTTVWTVS QFFARHSGGN HPDQVRLGKI ISLCQVIEDC CCSQNKTNRV TPEEVAAKID LYLRGATNLE ECLARLEKAR PPRVIDTSFD WDVVLPGVEA ATQTNKLPQV NQCRALVPVV TQKSLDNNSV PLTAFSLANY YYRAQGDEVR HRERLTAVLS KLEEVVREEY GLMPTEPGPR PTLPRGLDEL KDQMEEDLLR LANAQATSDM MAWAVEQVDL KTWVKNYPRW TPPPPPPKVQ PRKTKPVKSL PERKPVPAPR RKVGPDCGSP VSLGGDVPNS WEDLAVSSPL DLPTPPEPAT LSSELVIVSS PQCIFRPATP LSEPAPIPAP RGTVSRPVTP LSEPIPVPAP RRKFQQVKRL SSAAAVPLHQ NEPLDLSASS QTEYEASPSA PPQSGGVLGV EGHEAEETLS EISDMSGNIK PASVSSSSSL SSVEITRPKY SAQAIIDSGG PCSGHLQGVK ETCLSVMREA CDATKLDDPA TQEWLSRMWD RVDMLTWRNT SVCQAIRTLD GRLKFLPKMI LETPPPYPCE FVMMPHTPAP SVGAESDLTI GSVATEDVPR ILEKIENVGE MANQEPSAFS EDKPVDDQLV NDPRISSRRP DESTAAPSAG TGGAGSFTDL PSSDGADADG GGPFRTAKRK AERLFDQLSR QVFDLVSHLP VFFSRLFHPG GGYSTGDWGF AAFTLLCLFL CYSYPAFGIA PLLGVFSGTS RRVRMGVFGC WLAFAVGLFK PVSDPVGAAC EFDSPECRNI LLSFELLKPW DPVRSLVVGP VGLGLAILGR LLGGARCIWH FLLRLGIVAD CILAGAYVLS QGRCKKCWGS CIRTAPNEVA FNVFPFTRAT RSSLIDLCDR FCAPKGMDPI FLATGWRGCW AGRSPIEQPS EKPIAFAQLD EKKITARTVV AQPYDPNQAV KCLRVLQAGG AMVAEAVPKV VKVSAVPFRA PFFPTGVKVD PDCRVVVDPD TFTAALRSGY STTNLVLGVG DFAQLNGLKI RQISKPSGGG PHLMAALHVA CSMALHMLTG IYVTAVGSCG TGTNDPWCAN PFAVPGYGPG SLCTSRLCIS QHGLTLPLTA LVAGFGIQEI ALVVLIFVSI GGMAHRLSCK ADMLCILLAI ASYVWVPLTW LLCVFPCWLR CFSLHPLTIL WLVFFLISVN MPSGILAMVL LVSLWLLGRY TNVAGLVTPY DIHHYTSGPR GVAALATAPD GTYLAAVRRA ALTGRTMLFT PSQLGSLLEG AFRTRKPSLN TVNVIGSSMG SGGVFTIDGK VKCVTAAHVL TGNSARVSGV GFNQMLDFDV KGDFAIADCP NWQGAAPKAQ FCADGWTGRA YWLTSSGVEP GVIGKGFAFC FTACGDSGSP VITEAGELVG VHTGSNKQGG GIVTRPSGQF CNVAPIKLSE LSEFFAGPKV PLGDVKVGSH IIKDISEVPS DLCALLAAKP ELEGGLSTVQ LLCVFFLLWR MMGHAWTPLV AVSFFILNEV LPAVLVRSVF SFGMFVLSWL TPWSAQILMI RLLTAALNRN RWSLAFFSLG AVTGFVADLA ATQGHPLQAV MNLSTYAFLP RMMVVTSPVP VITCGVVHLL AIILYLFKYR GLHQILVGDG VFSAAFFLRY FAEGKLREGV SQSCGMNHES LTGALAMRLN DEDLDFLMKW TDFKCFVSAS NMRNAAGQFI EAAYAKALRV ELAQLVQVDK VRGVLAKLEA FADTVAPQLS PGDIVVALGH TPVGSIFDLK VGSTKHTLQA IETRVLAGSK MTVARVVDPT PTPPPAPVPI PLPPKVLENG PNAWGDEDRL NKKKRRRMEA LGIYVMGGKK YQKFWDKNSG DVFYEEVHNN TDEWECLRVG DPADFDPEKG TLCGHVTIEN KAYHVYISPS GKKFLVPVNP ENGRVQWEAA KLSMEQALGM MNVDGELTAK ELEKLKRIID KLQGLTKEQC LNLLAASGLT RCGRGGLVVT ETAVKIVKFH NRTFTLGPVN LKVASEVELK DAVEHNQHPV ARPIDGGVVL LRSAVPSLID VLISGADASP KLLAHHGPGN TGIDGTLWDF ESEATKEEVA LSAQIIQACD IRRGDAPKIG LPYKLYPVRG NPERVKGVLQ NTRFGDIPYK TPSDTGSPVH AAACLTPNAT PVTDGRSVLA TTMPPGFELY VPTIPASVLD YLDSRPDCPK QLTEHGCEDA ALKDLSKYDL STQGFVLPGV LRLVRKYLFA HVGKCPPVHR PSTYPAKNSM AGINGNRFPT KDIQSVPEID VLCAQAVREN WQTVTPCTLK KQYCGKKKTR TILGTNNFIA LAHRAALSGV TQGFMKKAFN SPIALGKNKF KELQTSVLGR CLEADLASCD RSTPAIVRWF AANLLYELAC AEEHLPSYVL NCCHDLLVTQ SGAVTKRGGL SSGDPITSVS NTIYSLVIYA QHMVLSYFKS GHPHGLLFLQ DQLKFEDMLK VQPLIVYSDD LVLYAESPTM PNYHWWVEHL NLMLGFQTDP KKTAITDSPS FLGCRIINGR QLVPNRDRIL AALAYHMKAS NVSEYYASAA AILMDSCACL EYDPEWFEEL VVGIAQCARK DGYSFPGTPF FMSMWEKLRS NYEGKKSRVC GYCGAPAPYA TACGLDVCIY HTHFHQHCPV TIWCGHPAGS GSCSECKSPV GKGTSPLDEV LEQVPYKPPR TVIMHVEQGL TPLDPGRYQT RRGLVSVRRG IRGNEVELPD GDYASTALLP TCKEINMVAV ASNVLRSRFI IGPPGAGKTY WLLQQVQDGD VIYTPTHQTM LDMIRALGTC RFNVPAGTTL QFPVPSRTGP WVRILAGGWC PGKNSFLDEA AYCNHLDVLR LLSKTTLTCL GDFKQLHPVG FDSHCYVFDI MPQTQLKTIW RFGQNICDAI QPDYRDKLMS MVNTTRVTYV EKPVRYGQVL TPYHRDREDD AITIDSSQGA TFDVVTLHLP TKDSLNRQRA LVAITRARHA IFVYDPHRQL QGLFDLPAKG TPVNLAVHRD GQLIVLDRNN KECTVAQALG NGDKFRATDK RVVDSLRAIC ADLEGSSSPL PKVAHNLGFY FSPDLTQFAK LPVELAPHWP VVTTQNNEKW PDRLVASLRP IHKYSRACIG AGYMVGPSVF LGTPGVVSYY LTKFVKGEAQ LLPETVFSTG RIEVDCREYL DDREREVAAS LPHAFIGDVK GTTVGGCHHV TSRYLPRVLP KESVAVVGVS SPGKAAKALC TLTDVYLPDL EAYLHPETQS KCWKMMLDFK EVRLMVWRDK TAYFQLEGRY FTWYQLASYA SYIRVPVNST VYLDPCMGPA LCNRRVVGST HWGADLAVTP YDYGAKIILS SAYHGEMPPG YKILACAEFS LDDPVRYKHT WGFESDTAYL YEFTGNGEDW EDYNDAFRAR QEGKIYKATA TSLKFHFPPG PVIEPTLGLN

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