Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200226"

Accession numberr200226 [export]
Locus nameybl005w
Recode1 namepol_p_tra_ty1
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classEukaryota (Transposable element)
OrganismSaccharomyces cerevisiae [details]

Sequence

Varianttransposable element Ty1, YBLWTY1-1
GenBank IDsZ35766.1,Z35765.1
SequenceDNA of 5269 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 1,306)
Descriptionproduction of fusion protein and set the ratio between two protein products.
ATGGAATCCC AACAATTATC TCAACATTCC CCGATTTTTC ATGGTAGCGC CTGTGCTTCG GTTACTTCTA AAGAAGTCCA AACAACTCAA GATCCGTTAG ACATTTCAGC TTCCAAAACA GAAGAATGTG AGAAGGTTTC CACTCAGGCT AATTCTCAAC AGCCAACAAC ACCTCCCTCA TCTGCTGTTC CAGAGAACCA TCATCATGCC TCTCCTCAAG CTGCTCAAGT ACCATTGCCA CAAAATGGGC CGTACCCACA GCAGCGCATG ATGAATACCC AACAAGCCAA TATTTCTGGC TGGCCAGTAT ACGGGCACCC ATCCTTGATG CCGTATCCAC CTTATCAAAT GTCACCTATG TACGCTCCAC CTGGGGCACA ATCACAGTTT ACACAATATC CACAATATGT TGGAACACAT TTGAACACCC CGTCACCTGA GTCAGGTAAT TCATTTCCTG ATTCATCCTC AGCAAAGTCT AATATGACAT CCACTAATCA ACATGTCAGA CCACCGCCAA TCTTAACCTC ACCTAATGAC TTTCTAAATT GGGTTAAAAT ATACATCAAA TTTTTACAAA ATTCGAATCT CGGTGATATT ATTCCGACAG CAACAAGAAA AGCCGTACGT CAGATGACTG ATGACGAACT CACCTTCTTA TGTCACACCT TTCAACTATT TGCTCCATCT CAATTCTTAC CCCCCTGGGT TAAAGACATC TTATCTGTTG ATTATACAGA TATCATGAAA ATTCTTTCCA AAAGCATTAA CAAAATGCAG TCTGATACTC AAGAGGTAAA TGACATTACG ACCCTAGCAA CTTTGCATTA TAATGGAAGT ACACCTGCAG ATGCATTTGA AGCAGAAGTC ACAAACATTC TTGACAGACT AAACAACAAT GGCATTCCTA TCAATAACAA GGTAGCATGC CAATTCATTA TGAGAGGTCT ATCTGGCGAG TACAAATTTT TACCGTACGC ACGTCATCGA TGTATACATA TGACAGTTGC TGATCTGTTT TCAGACATAC ATTCTATGTA TGAAGAACAA CAGGAATCAA AACGTAATAA ATCTACTTAT AGGAGAAGTC CGAGTGATGA GAAGAAAGAC TCTCGCACCT ATACGAATAC AACCAAACCC AAATCCATAA CTCGGAATTC CCAAAAACCA AATAATTCGC AATCAAGAAC AGCCAGGGCT CATAACGTAT CCACATTTAA TAACTCTCCC GGCCCTGATA ACGATCTCAT AAGAGGATCG ACTACTGAAC CGATTCAATT GAAGAATACA CACGACCTTC ACCTTAGGCC AGGAACTTAC TGAATCTACG GTAAATCACA CTAATCATTC TGATGATGAA CTCCCTGGAC ACCTCCTTCT TGATTCAGGA GCATCACGAA CCCTTATAAG ATCTGCTCAT CACATACACT CAGCATCATC TAATCCTGAC ATAAACGTAG TTGATGCTCA AAAAAGAAAT ATACCAATTA ACGCTATTGG TGACCTACAA TTTCACTTCC AGGACAACAC CAAAACATCA ATAAAGGTAT TGCACACTCC TAACATAGCC TATGACTTAC TCAGTTTGAA TGAATTGGCT GCAGTAGATA TCACAGCATG CTTTACCAAA AACGTCTTAG AACGATCTGA CGGCACTGTA CTTGCACCTA TCGTAAAATA TGGAGACTTT TACTGGGTAT CTAAAAAGTA CTTGCTTCCA TCAAATATCT CCGTACCCAC CATCAATAAT GTCCATACAA GTGAAAGTAC ACGCAAATAT CCTTATCCTT TCATTCATCG AATGCTTGCA CATGCCAATG CACAGACAAT TCGATACTCA CTTAAAAATA ACACCATCAC GTATTTTAAC GAATCAGATG TCGACTGGTC TAGTGCTATT GACTATCAAT GTCCTGATTG TTTAATCGGC AAAAGCACCA AACACAGACA TATCAAAGGT TCACGACTAA AATACCAAAA TTCATACGAA CCCTTTCAAT ACCTACATAC TGACATATTT GGTCCAGTTC ACAACCTACC AAAAAGTGCA CCATCCTATT TCATCTCATT TACTGATGAG ACAACAAAAT TCCGTTGGGT TTATCCATTA CACGACCGTC GCGAGGACTC TATCCTCGAT GTTTTTACTA CGATACTAGC TTTTATTAAA AACCAGTTTC AGGCCAGTGT CTTGGTTATA CAAATGGACC GTGGTTCTGA GTATACTAAC AGAACTCTCC ATAAATTCCT TGAAAAAAAT GGTATAACTC CATGCTATAC AACCACAGCG GATTCCCGAG CACATGGAGT CGCTGAACGG CTAAACCGTA CCTTATTAGA TGACTGCCGT ACTCAACTGC AATGTAGTGG TTTACCGAAC CATTTATGGT TCTCTGCAAT CGAATTTTCT ACTATTGTGA GAAATTCACT AGCTTCACCT AAAAGCAAAA AATCTGCAAG ACAACATGCT GGCTTGGCAG GACTTGATAT CAGTACTTTG TTACCTTTCG GTCAACCTGT TATCGTCAAT GATCACAACC CTAACTCCAA AATACATCCT CGTGGCATCC CAGGCTACGC TCTACATCCG TCTCGAAACT CTTATGGATA TATCATCTAT CTTCCATCCT TAAAGAAGAC AGTAGATACA ACTAACTATG TTATTCTTCA GGGCAAGGAA TCCAGATTAG ATCAATTCAA TTACGACGCA CTCACTTTCG ATGAAGACTT AAACCGTTTA ACTGCTTCAT ATCAATCGTT CATTGCGTCA AATGAGATCC AACAATCCAA TGATCTTAAC ATAGAATCAG ACCATGACTT TCAATCTGAT ATTGAACTAT ATCCTGAGCA ACCGAGAAAT GTCCTTTCAA AAGCTGTGAG TCCAACCGAT TCCACACCCC CGTCAACTCA TACTGAAGAT TCGAAACGTG TTTCTAAAAC CAATATTCGC GCACCCAGAG AAGTTGACCC CAACATATCT GAATCTAATA TTCTTCCATC TAAGAAGAGA TCTAGCACCC CCCAAATTTC CGATATCGAG AGTACCGATT CGGGTGGTAT GCATAGATTA GATGTTCCTT TACTTGCTCC CATGTCCCAA TCTAACACAC ATGAGTCGTC GTACGCCAGT AAATCTAAAG ATTTCAGACA CTCAGACTCG TACAGTGACA ATGAGACTAA TCATACAAAC GTACCAATAT CCAGTACGGG TGGTACCAAT AATAAAACTG TTCCGCAGAC AAGCGAACAG GAGACTGAGA AAAGGATTAT ACACCGTTCA CCTTCGATCG ATACTTCCTC ATCAGAAAGT AATTCACTAC ACCACGTCGT TCCTATCAAA ACGTCAGATA CCTGTCCTAA GGAGAATACA GAGGAATCTA TAATTGCTGA TCTTCCACTT CCCGATCTGC CTCCAGAACC TCCTACCGAA TTATCAGACT CCTTTAAGGA ACTTCCACCG ATCAATTCTC GTCAAACTAA TTCCAGTTTG GGTGGTATTG GTGACTCTAA TGCCTATACT ACTATCAACA GTAAGAAAAG ATCATTAGAA GATAATGAAA CTGAAATTAA GGTATCACGA GACACATGGA ATACTAAGAA TATGCGTAGT TTAGAACCTC CGAGATCGAA GAAACGAATT CACCTGATTG CAGCTGTAAA AGCAGTAAAA TCAATCAAAC CAATACGAAC AACCTTACGA TACGATGAGG CAATCACCTA TAATAAAGAT ATTAAAGAAA AAGAAAAATA TATCGAGGCA TACCACAAAG AAGTCAATCA ACTGTTGAAG ATGAAAACTT GGGACACTGA CAAATATTAT GACAGAAAAG AAATAGACCC TAAAAGAGTA ATAAATTCAA TGTTTATCTT CAACAGGAAA CGTGACGGTA CTCATAAAGC TAGATTTGTT GCAAGAGGTG ATATTCAGCA TCCTGACACT TACGACTCAG GCATGCAATC CAATACCGTA CATCACTATG CATTAATGAC ATCCCTGTCA CTTGCATTAG ACAATAACTA CCATATTACA CAATTAGACA TATCTTCGGC ATATTTGTAT GCAGACATCA AAGAAGAATT ATACATAAGA CCTCCACCAC ATTTAGGAAT GAATGATAAG TTGATACGTT TGAAGAAATC ACTTTATGGA TTGAAACAAA GTGGAGCGAA CTGGTACGAA ACTATCAAAT CATACCTGAT AAAACAATGT GGTATGGAAG AAGTTCGTGG ATGGTCATGC GTATTTAAAA ACAGTCAAGT GACAATTTGT TTATTCGTAG ATGATATGGT ATTGTTTAGC AAAAATCTAA ATTCAAACAA AAGAATTATA GACAAGCTTA AGATGCAATA CGACACCAAG ATTATAAATC TAGGCGAAAG TGATGAGGAA ATTCAATATG ACATTCTTGG CTTGGAAATC AAATACCAAA GAGGTAAATA CATGAAATTG GGTATGGAAA ACTCATTAAC TGAAAAAATA CCCAAACTAA ACGTACCTTT GAACCCAAAA GGAAGGAAAC TTAGCGCTCC AGGTCAACCA GGTCTATATA TAGACCAGCA AGAACTAGAG CTAGAAGAAG ATGATTACAA AATGAAGGTA CATGAAATGC AAAAGCTGAT AGGTCTAGCA TCATATGTTG GATATAAATT TAGATTTGAC CTATTATACT ACATCAACAC ACTTGCACAA CATATACTAT TTCCGTCCAA GCAAGTGTTA GATATGACAT ATGAATTGAT ACAGTTCATA TGGAATACGA GAGATAAGCA ATTAATATGG CACAAAAGCA AACCTGTTAA GCCAACAAAT AAATTAGTTG TTATAAGCGA TGCCTCGTAT GGTAACCAAC CGTATTATAA ATCACAAATT GGCAACATAT ATTTACTTAA TGGAAAAGTA ATTGGAGGAA AGTCCACCAA GGCTTCATTA ACATGTACTT CAACCACGGA AGCAGAAATA CACGCAATAA GTGAATCTGT CCCATTATTA AATAATCTAA GTTACCTGAT ACAAGAACTC GACAAGAAAC CAATTACCAA AGGATTACTA ACCGACAGTA AATCTACAAT CAGTATAATT ATATCCAATA ATGAAGAGAA ATTTAGAAAC AGATTTTTTG GTACTAAAGC AATGAGACTG AGAGATGAAG TATCAGGAAA TCATCTGCAC GTATGCTATA TCGAAACCAA AAAGAATATT GCAGACGTAA TGACCAAACC TCTTCCGATA AAAACATTCA AACTATTAAC AAACAAATGG ATTCATTAG

Products

Productybl005w
Descriptiongag capsid polyprotein
MESQQLSQHS PIFHGSACAS VTSKEVQTTQ DPLDISASKT EECEKVSTQA NSQQPTTPPS SAVPENHHHA SPQAAQVPLP QNGPYPQQRM MNTQQANISG WPVYGHPSLM PYPPYQMSPM YAPPGAQSQF TQYPQYVGTH LNTPSPESGN SFPDSSSAKS NMTSTNQHVR PPPILTSPND FLNWVKIYIK FLQNSNLGDI IPTATRKAVR QMTDDELTFL CHTFQLFAPS QFLPPWVKDI LSVDYTDIMK ILSKSINKMQ SDTQEVNDIT TLATLHYNGS TPADAFEAEV TNILDRLNNN GIPINNKVAC QFIMRGLSGE YKFLPYARHR CIHMTVADLF SDIHSMYEEQ QESKRNKSTY RRSPSDEKKD SRTYTNTTKP KSITRNSQKP NNSQSRTARA HNVSTFNNSP GPDNDLIRGS TTEPIQLKNT HDLHLRPGTY
Productybl005w-orf2
Descriptiongag capsid polyprotein, RNA polymerase
Modifications1305..1307:ribosomal_frameshift
MESQQLSQHS PIFHGSACAS VTSKEVQTTQ DPLDISASKT EECEKVSTQA NSQQPTTPPS SAVPENHHHA SPQAAQVPLP QNGPYPQQRM MNTQQANISG WPVYGHPSLM PYPPYQMSPM YAPPGAQSQF TQYPQYVGTH LNTPSPESGN SFPDSSSAKS NMTSTNQHVR PPPILTSPND FLNWVKIYIK FLQNSNLGDI IPTATRKAVR QMTDDELTFL CHTFQLFAPS QFLPPWVKDI LSVDYTDIMK ILSKSINKMQ SDTQEVNDIT TLATLHYNGS TPADAFEAEV TNILDRLNNN GIPINNKVAC QFIMRGLSGE YKFLPYARHR CIHMTVADLF SDIHSMYEEQ QESKRNKSTY RRSPSDEKKD SRTYTNTTKP KSITRNSQKP NNSQSRTARA HNVSTFNNSP GPDNDLIRGS TTEPIQLKNT HDLHLGQELT ESTVNHTNHS DDELPGHLLL DSGASRTLIR SAHHIHSASS NPDINVVDAQ KRNIPINAIG DLQFHFQDNT KTSIKVLHTP NIAYDLLSLN ELAAVDITAC FTKNVLERSD GTVLAPIVKY GDFYWVSKKY LLPSNISVPT INNVHTSEST RKYPYPFIHR MLAHANAQTI RYSLKNNTIT YFNESDVDWS SAIDYQCPDC LIGKSTKHRH IKGSRLKYQN SYEPFQYLHT DIFGPVHNLP KSAPSYFISF TDETTKFRWV YPLHDRREDS ILDVFTTILA FIKNQFQASV LVIQMDRGSE YTNRTLHKFL EKNGITPCYT TTADSRAHGV AERLNRTLLD DCRTQLQCSG LPNHLWFSAI EFSTIVRNSL ASPKSKKSAR QHAGLAGLDI STLLPFGQPV IVNDHNPNSK IHPRGIPGYA LHPSRNSYGY IIYLPSLKKT VDTTNYVILQ GKESRLDQFN YDALTFDEDL NRLTASYQSF IASNEIQQSN DLNIESDHDF QSDIELYPEQ PRNVLSKAVS PTDSTPPSTH TEDSKRVSKT NIRAPREVDP NISESNILPS KKRSSTPQIS DIESTDSGGM HRLDVPLLAP MSQSNTHESS YASKSKDFRH SDSYSDNETN HTNVPISSTG GTNNKTVPQT SEQETEKRII HRSPSIDTSS SESNSLHHVV PIKTSDTCPK ENTEESIIAD LPLPDLPPEP PTELSDSFKE LPPINSRQTN SSLGGIGDSN AYTTINSKKR SLEDNETEIK VSRDTWNTKN MRSLEPPRSK KRIHLIAAVK AVKSIKPIRT TLRYDEAITY NKDIKEKEKY IEAYHKEVNQ LLKMKTWDTD KYYDRKEIDP KRVINSMFIF NRKRDGTHKA RFVARGDIQH PDTYDSGMQS NTVHHYALMT SLSLALDNNY HITQLDISSA YLYADIKEEL YIRPPPHLGM NDKLIRLKKS LYGLKQSGAN WYETIKSYLI KQCGMEEVRG WSCVFKNSQV TICLFVDDMV LFSKNLNSNK RIIDKLKMQY DTKIINLGES DEEIQYDILG LEIKYQRGKY MKLGMENSLT EKIPKLNVPL NPKGRKLSAP GQPGLYIDQQ ELELEEDDYK MKVHEMQKLI GLASYVGYKF RFDLLYYINT LAQHILFPSK QVLDMTYELI QFIWNTRDKQ LIWHKSKPVK PTNKLVVISD ASYGNQPYYK SQIGNIYLLN GKVIGGKSTK ASLTCTSTTE AEIHAISESV PLLNNLSYLI QELDKKPITK GLLTDSKSTI SIIISNNEEK FRNRFFGTKA MRLRDEVSGN HLHVCYIETK KNIADVMTKP LPIKTFKLLT NKWIH

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