Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200227"

Accession numberr200227 [export]
Locus nameybl101w
Recode1 namepol_p_tra_ty2
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classEukaryota (Transposable element)
OrganismSaccharomyces cerevisiae [details]

Sequence

Varianttransposable element Ty2, YCLWTY2-1
GenBank IDsX79489.1,Z35862.2,Z35861.1
SequenceDNA of 5314 nucleotides [sequence]

Recoding event

Event type+1 Frameshifting (position: 1,294)
Descriptionproduction of fusion protein and set the ratio between two protein products.
ATGGAATCCC AACAATTACA TCAAAATCCA CATTCTCTAC ATGGTAGCGC CTATGCTTCG GTTACTTCTA AGGAAGTCTC ATCAAATCAA GATCCGTTAG CCGTTTCAGC TTCCAATTTA CCGGAATTTG ATAGAGATTC CACTAAGGTT AATTCTCAAC AAGAGACAAC ACCTGGGACA TCAGCTGTTC CAGAGAACCA TCATCATGTC TCTCCTCAAC CTGCTTCAGT ACCACCTCCA CAGAATGGAC AGTACCAACA GCACGGCATG ATGACTCCAA ACAAAGCTAT GGCTTCTAAC TGGGCACATT ACCAACAACC ATCTATGATG ACGTGTTCAC ATTATCAAAC GTCACCTGCG TATTATCAAC CGGACCCACA CTATCCGCTG CCACAGTATA TCCCACCGCT GAGTACTTCC TCACCTGATC CAATCGATTC ACAGGATCAA CACTCTGAAG TACCTCAAGC TAAGACAAAG GTGAGAAATA ATGTCTTACC ACCACACACT TTAACATCAG AAGAAAACTT TTATACATGG GTTAAATTTT ACATCAGATT TTTGAAGAAC TCTAATCTCG GTGACATCAT TCCAAATGAT CAGGGTGAAA TCAAAAGACA AATGACTTAT GAAGAACATG CGTATATATA CAATACCTTC CAAGCATTTG CCCCATTTCA TTTATTGCCA ACATGGGTAA AACAAATTTT AGAAATTAAT TATGCTGACA TCCTTACAGT CCTTTGTAAA AGTGTGTCCA AAATGCAAAC TAACAATCAA GAATTAAAGG ATTGGATAGC TCTTGCCAAC CTTGAGTACG ACGGAAGTAC ATCTGCTGAT ACATTTGAAA TTACGGTCAG CACGATCATT CAAAGGCTAA AAGAAAACAA TATCAATGTT AGCGACAGAT TGGCCTGTCA ACTAATACTT AAAGGTCTAT CCGGTGACTT CAAATACCTA CGTAATCAAT ATCGTACCAA AACGAACATG AAACTTTCCC AATTATTCGC TGAAATTCAA TTAATATATG ACGAAAATAA AATCATGAAT CTAAATAAAC CGTCCCAATA CAAACAACAC AGCGAATACA AAAATGTTTC TCGCACATCT CCAAACACGA CTAACACAAA GGTTACAACT CGTAATTATC ATAGAACAAA TAGTTCAAAA CCAAGAGCAG CAAAAGCTCA CAATATTGCT ACATCTAGTA AATTCTCAAG GGTGAACAAT GATCACATTA ATGAATCAAC CGTTTCATCA CAATACTTAA GCGATGACAA CGAACTTAGT CTTAGGCCAG CAACAGAAAG AATCTAAGCC AACACACACA ATAGACTCGA ATGACGAACT ACCTGATCAC CTTCTTATTG ATTCAGGAGC TTCGCAAACG CTTGTCAGAT CAGCCCATTA TTTACACCAT GCAACACCCA ATTCTGAAAT AAACATAGTC GATGCTCAAA AACAAGACAT TCCTATAAAT GCCATTGGTA ATCTTCACTT CAACTTTCAG AACGGCACCA AAACATCAAT AAAAGCACTG CACACACCAA ACATAGCCTA TGATCTATTA AGTTTGAGTG AGCTGGCTAA TCAAAATATT ACTGCCTGCT TTACCAGAAA CACTTTAGAA AGATCGGATG GTACAGTACT AGCTCCCATA GTCAAACATG GAGACTTTTA CTGGTTATCT AAAAAATACC TAATTCCTTC GCACATTTCA AAGCTAACAA TAAACAACGT CAACAAAAGC AAAAGCGTAA ATAAATATCC ATATCCGTTA ATACATCGAA TGCTTGGACA TGCTAACTTC CGAAGTATTC AGAAGTCTCT TAAGAAGAAT GCAGTTACAT ATTTGAAAGA ATCGGATATT GAATGGTCTA ACGCTAGCAC ATATCAATGT CCTGACTGTC TAATCGGCAA AAGCACGAAA CATAGGCATG TCAAAGGATC ACGACTAAAG TACCAAGAAT CATATGAGCC TTTTCAGTAC TTGCATACCG ATATATTTGG TCCTGTACAT CACTTACCGA AAAGTGCACC TTCTTACTTT ATATCGTTTA CAGATGAGAA AACCAGATTC CAATGGGTCT ACCCATTACA CGACCGTCGT GAAGAATCTA TACTCAATGT TTTTACATCG ATATTAGCAT TTATTAAGAA CCAATTCAAT GCTCGCGTTC TAGTTATCCA GATGGATCGT GGCTCCGAGT ACACTAACAA AACTCTTCAT AAGTTCTTTA CGAACAGAGG TATTACTGCA TGCTATACAA CCACGGCAGA TTCTAGAGCA CACGGTGTCG CTGAACGATT AAATCGTACT TTATTAAACG ATTGTCGCAC ACTGCTTCAT TGCAGTGGTC TACCAAATCA TCTATGGTTC TCAGCAGTCG AATTTTCTAC TATAATCAGA AATTCATTAG TCTCACCAAA AAACGATAAA TCTGCAAGAC AACATGCAGG TTTAGCTGGA CTGGACATTA CTACTATACT ACCTTTCGGT CAACCGGTTA TAGTTAACAA CCATAATCCC GACTCGAAAA TACATCCTCG TGGCATTCCA GGTTACGCCT TACATCCGTC ACGAAACTCT TATGGCTATA TTATCTATCT TCCATCATTA AAAAAGACAG TAGATACTAC CAATTACGTT ATATTACAAG ACAACCAATC CAAATTGGAC CAATTCAATT ATGATACACT CACCTTTGAT GATGATCTCA ATCGTTTAAC AGCCCATAAC CAATCTTTTA TTGAACAAAA TGAAACAGAG CAGTCATATG ATCAAAATAC AGAATCTGAT CATGACTATC AATCGGAGAT TGAAATAAAC TCTGATCCTC TAGTGAACGA CTTCTCGTCC CAATCAATGA ACCCTTTACA ATTAGACCAC GAACCAGTCC AAAAAGTACG TGCACTAAAA GAAGTTGATG CCGACATATC TGAATACAAT ATTCTTCCAT CTCCTGTACG ATCTCGTACA CCCCATATCA TTAATAAAGA GAGTACCGAA ATGGGTGGTA CCATTGAATC AGATACTACT TCACCTAGAC ACTCGTCTAC CTTCACTGCA CGAAACCAAA AGCGACCTGG TAGTCCCAAT GATATGATTG ATTTGACCTC ACAGGATAGA GTTAATTATG AACTTGAAAA CATCAAAACT ACCCGTTTGG GTGGTACGGA GGAACCATAT ATTCAACGAA ATAGTGATAC AAATATCAAA TACAGGACTA CAAATAGTAC GCCCTCAATA GATGACCGTT CGCCCGACAG TGACTCTACT ACTCCCATCA TCTCCATAGA AACAAAGGCT GCATGCGATA ATACACCCTC CATTGATACG GATCCGCCAG AATATCGATC TTCTGACCAT GCGACTCCTA ATATAATGCC TGACAAATCC TCAAAAAATG TTACGGCTGA TTCTATTCTT GACGACCTCC CACTTCCTGA CTTAACTAAT AAATCTCCTA CGGACACTTC TGATGTTTCA AAAGATATTC CACACATACA CTCTCGTCAG ACTAATTCCA GTTTGGGTGG TATGGATGAT TCTAATGTTC TGACTACTAC CAAAAGTAAG AAAAGATCAT TAGAAGATAA TGAAACTGAA ATTGAGGTAT CCCGAGACAC ATGGAATAAT AAGAATATGA GAAGTCTGGA ACCACCAAGA TCGAAGAAAC GTATAAATCT AATTGCAGCA ATAAAAGGAG TAAAATCAAT CAAACCAGTT CGAACGACCT TAAGATATGA TGAAGCAATT ACATATAATG AAGACAACAA AGAAAAAGAC AGATATATTG AAGCTTATCA TAAAGAAATT AACCAACTAT TGAGAATGAA CACTTGGGAT ACAAACAAAT ATTATGATAG AAATGACATA GATCCTAAGA AAGTAATAAA CTCAATGTTT ATATTTAACA AAAAACGTGA TGGTACACAC AAAGCCAGAT TTGTTGCAAG AGGCGACATT CAACACCCCG ATACATATGA TTCTGATATG CAATCCAATA CCGTACATCA CTATGCACTG ATGACGTCAT TGTCAATCGC ATTAGACAAT GACTATTATA TCACACAGCT GGACATATCC TCTGCTTACT TATATGCTGA TATCAAAGAA GAATTATACA TAAGACCTCC ACCACATTTA GGTTTGAATG ATAAGTTACT ACGTTTGAGA AAATCACTCT ATGGTTTGAA ACAAAGTGGT GCAAACTGGT ATGAAACCAT TAAATCATAT TTAATAAATT GTTGCGACAT GCAAGAAGTT CGCGGATGGT CATGCGTATT TAAGAATAGT CAAGTAACAA TTTGCTTATT CGTTGATGAT ATGATATTGT TCAGCAAAGA CTTAAATGCA AATGAGAAAA TCATAACAAC ACTCAAGAAA CAATACGATA CAAAGATAAT AAATCTGGGT GAAAGTGATA ACGAAATTCA GTACGACATA CTTGGATTAG AGATCAAATA TCAAAGAAGC AAGTACATGA AATTAGGTAT GGAAAAATCC TTGACAGAAA AATTACCCAA ACTAAACGTA CCTTTGAACC CAAAAGGAAA GAAACTTAGC GCTCCAGGTC AACCAGGTCA TTATATAGAC CAGGATGAAC TAGAAATAGA TGAAGATGAA TACAAAGAGA AAGTACATGA AATGCAAAAG TTGATTGGTC TAGCTTCTTA TGTTGGATAT AAATTTAGAT TTGACTTACT ATACTACATC AACACACTTG CTCAACATAT ACTATTCCCC TCTAGGCAAG TTTTAGACAT GACATATGAG TTAATACAAT TCATGTGGGA CACTAGAGAT AAACAATTAA TATGGCACAA AAACAAACCT ACCAAGCCAG ATAATAAACT AGTCGCAATA AGCGATGCTT CATATGGTAA CCAACCATAT TACAAGTCAC AAATTGGTAA CATTTTCCTA CTCAACGGAA AAGTGATTGG AGGAAAGTCG ACAAAGGCTT CGTTAACATG CACTTCAACT ACAGAAGCAG AAATACACGC AGTCAGTGAA GCTATACCGC TATTGAATAA CCTCAGTCAC CTTGTGCAAG AACTTAACAA GAAACCAATT ATTAAAGGCT TACTTACTGA TAGTAGATCA ACGATCAGTA TAATTAAGTC TACAAATGAA GAGAAATTTA GAAACAGATT TTTTGGCACG AAGGCAATGA GACTTAGAGA TGAAGTATCA GGTAATAATT TATACGTATA CTACATCGAG ACCAAGAAGA ACATTGCTGA TGTGATGACA AAACCTCTTC CGATAAAAAC ATTTAAACTA TTAACAAACA AATGGATTCA TTAG

Products

Productybl101w
Descriptiongag capsid polyprotein
MESQQLHQNP HSLHGSAYAS VTSKEVSSNQ DPLAVSASNL PEFDRDSTKV NSQQETTPGT SAVPENHHHV SPQPASVPPP QNGQYQQHGM MTPNKAMASN WAHYQQPSMM TCSHYQTSPA YYQPDPHYPL PQYIPPLSTS SPDPIDSQDQ HSEVPQAKTK VRNNVLPPHT LTSEENFYTW VKFYIRFLKN SNLGDIIPND QGEIKRQMTY EEHAYIYNTF QAFAPFHLLP TWVKQILEIN YADILTVLCK SVSKMQTNNQ ELKDWIALAN LEYDGSTSAD TFEITVSTII QRLKENNINV SDRLACQLIL KGLSGDFKYL RNQYRTKTNM KLSQLFAEIQ LIYDENKIMN LNKPSQYKQH SEYKNVSRTS PNTTNTKVTT RNYHRTNSSK PRAAKAHNIA TSSKFSRVNN DHINESTVSS QYLSDDNELS LRPATERI
Productybl101w-orf2
Descriptiongag capsid polyprotein, RNA polymerase
Modifications1293..1295:ribosomal_frameshift
MESQQLHQNP HSLHGSAYAS VTSKEVSSNQ DPLAVSASNL PEFDRDSTKV NSQQETTPGT SAVPENHHHV SPQPASVPPP QNGQYQQHGM MTPNKAMASN WAHYQQPSMM TCSHYQTSPA YYQPDPHYPL PQYIPPLSTS SPDPIDSQDQ HSEVPQAKTK VRNNVLPPHT LTSEENFYTW VKFYIRFLKN SNLGDIIPND QGEIKRQMTY EEHAYIYNTF QAFAPFHLLP TWVKQILEIN YADILTVLCK SVSKMQTNNQ ELKDWIALAN LEYDGSTSAD TFEITVSTII QRLKENNINV SDRLACQLIL KGLSGDFKYL RNQYRTKTNM KLSQLFAEIQ LIYDENKIMN LNKPSQYKQH SEYKNVSRTS PNTTNTKVTT RNYHRTNSSK PRAAKAHNIA TSSKFSRVNN DHINESTVSS QYLSDDNELS LGQQQKESKP THTIDSNDEL PDHLLIDSGA SQTLVRSAHY LHHATPNSEI NIVDAQKQDI PINAIGNLHF NFQNGTKTSI KALHTPNIAY DLLSLSELAN QNITACFTRN TLERSDGTVL APIVKHGDFY WLSKKYLIPS HISKLTINNV NKSKSVNKYP YPLIHRMLGH ANFRSIQKSL KKNAVTYLKE SDIEWSNAST YQCPDCLIGK STKHRHVKGS RLKYQESYEP FQYLHTDIFG PVHHLPKSAP SYFISFTDEK TRFQWVYPLH DRREESILNV FTSILAFIKN QFNARVLVIQ MDRGSEYTNK TLHKFFTNRG ITACYTTTAD SRAHGVAERL NRTLLNDCRT LLHCSGLPNH LWFSAVEFST IIRNSLVSPK NDKSARQHAG LAGLDITTIL PFGQPVIVNN HNPDSKIHPR GIPGYALHPS RNSYGYIIYL PSLKKTVDTT NYVILQDNQS KLDQFNYDTL TFDDDLNRLT AHNQSFIEQN ETEQSYDQNT ESDHDYQSEI EINSDPLVND FSSQSMNPLQ LDHEPVQKVR ALKEVDADIS EYNILPSPVR SRTPHIINKE STEMGGTIES DTTSPRHSST FTARNQKRPG SPNDMIDLTS QDRVNYELEN IKTTRLGGTE EPYIQRNSDT NIKYRTTNST PSIDDRSPDS DSTTPIISIE TKAACDNTPS IDTDPPEYRS SDHATPNIMP DKSSKNVTAD SILDDLPLPD LTNKSPTDTS DVSKDIPHIH SRQTNSSLGG MDDSNVLTTT KSKKRSLEDN ETEIEVSRDT WNNKNMRSLE PPRSKKRINL IAAIKGVKSI KPVRTTLRYD EAITYNEDNK EKDRYIEAYH KEINQLLRMN TWDTNKYYDR NDIDPKKVIN SMFIFNKKRD GTHKARFVAR GDIQHPDTYD SDMQSNTVHH YALMTSLSIA LDNDYYITQL DISSAYLYAD IKEELYIRPP PHLGLNDKLL RLRKSLYGLK QSGANWYETI KSYLINCCDM QEVRGWSCVF KNSQVTICLF VDDMILFSKD LNANEKIITT LKKQYDTKII NLGESDNEIQ YDILGLEIKY QRSKYMKLGM EKSLTEKLPK LNVPLNPKGK KLSAPGQPGH YIDQDELEID EDEYKEKVHE MQKLIGLASY VGYKFRFDLL YYINTLAQHI LFPSRQVLDM TYELIQFMWD TRDKQLIWHK NKPTKPDNKL VAISDASYGN QPYYKSQIGN IFLLNGKVIG GKSTKASLTC TSTTEAEIHA VSEAIPLLNN LSHLVQELNK KPIIKGLLTD SRSTISIIKS TNEEKFRNRF FGTKAMRLRD EVSGNNLYVY YIETKKNIAD VMTKPLPIKT FKLLTNKWIH

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