Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200232"

Accession numberr200232 [export]
Locus namegag-pol
Recode1 namepol_r_tra_pcal
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classEukaryota (Transposable element)
OrganismCandida albicans [details]

Sequence

Variantretrotransposon pCal
GenBank IDsAF007776.1,AF050215.1
SequenceDNA of 5706 nucleotides [sequence]
OrganisationPseudoknot (1) [see structure]
Sequence (1)

Recoding event

Event typeReadthrough (position: 973)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAGTTCCG CAAAGAATGA TGATAACGAA GGGAAGGTCA TGGAAAGTGT TGATCAAGCT AATGCTATTA GTAAGGTGGA TGAACATATC AAGGCTAGAT TCAATATGCT TTTCATAAAA TTTAATGACT TACCTAAGTT GGCCGTCGGT AATCAGAAAA GCGTGGATAA ATGGAATGAA GAATTTAAAT ATTTCCACGT TGCTTACCCC GATGTTTTGG AATTTTTGCT TGACTATAAT CCTAAAGATA AATTCAAGGT TAAAAAGGTA GAAGGTATTT ATTTTACTGG TTGGTGTTTA CAAATGTGTT TACAGTCCAT TTTTGATAGG TTCAGATTGA TCATGATTTC TAAGCTACCA AAGCACTTGC AAAAGGAAGC AAACTTAATC AAAGCTGCTT ATGATGCTGT TACTAAATCT AAAGATTATA CCATTACTAG TAAGATCTTG CTGAAGTTTG TAAACGTTGA ACATGAGTTA GTGGTTTGCT ATAACCTTCC ATATTTGCTG CAGGTGGAAG AGAAACTTGA GGAAATACTC TACAACACTT CAAACGTTGT CGATGAGTAT GTCCGTAGTC TTCCAAATCT CATAGGTCAA GTCTTGTACT TCAATCATGT GAAGAAATCA GAGGCTTTAA GTTTGTTTTT GAATATTCAT GCCTCATACT ACTCAAAGTG GATTCAAGCT GACAATGATA CATCAGTACT CCCAAGTTGC TCTACCATAG CTGAAGAAAT GTGTGATCAT CCTGATTATG CTAGATTGGT TGACATTCCA AGCAACAAAT ATGAACTTAA TCTTATTGTT AGTTTACCAG CACCAGAGAA ACCAAAAGGA AAACCAGAGG AGAACTCACT GGAACAATCT CAAAAGAAGA ACCTGAAATC AAGAAAGAGA AATAAGAAAC ATCCAAAATC AGATAACGAT AAAGGTGAAA AAGAAAAAGA AAAAGAAAAA ACTTCACTGG AATGAAAAAC AGGTGCTGCT TCTATTAATT GTGTAATGAA TATACATAAT TGCAGCAAAA CCACGTTTCC AGTAGAAAAT TCTCATTCTC TTAATGCTTC TTTGAACGTA ATGAATTTTA AAGGTTTAAG GTTTAACAAG TATCTAGTGT ATGATACTGG TGCCACAATA TCTGTTGTGA ACAATAAAGA TATATTGCTG AATGTTAAGG ACGCAACAAT TGAAGTTTCT GTTGCTGATG GTGCTACATT AGAAGCAGAT TGTATTGGTG ATCTAATTAT CAGAGTCGGT ATTGTCTCGA TTACGTTAGA GAATACATTG TATTTACCAG AAAGTTCCTT TAATCTTGTG AGTTTGAAAC AAATTGAAGA ACGAGGATTT AATGTTCTTA TTACTAAAGA ATCAGTGATT GTATTTAACC AAAATGTGGC TCCTACTATT ATTGCTTCAA GGAAGAATGC TGCTGATCTT TATATGGGTC CTCAATTCAG TGAAGAATCT TTAGAATGTG ATTTTGATTA TGATGGTTTG GCAGATATGT TGTCCAATGC TAACCAAGAT GACAAAGATA AATCAAGTAT GAATGAAATG TCAGAATATC AAGAACATGA TTATAGTTCT CGAGCATTAA TAAATTCTTT GACGGAGGTT GATGTTTTAG ATGTTGAAAT TTCCCCATAT GGAGTTGAAC AATTGCTACC AACTGGAGAT AAGAACGATA TTTATAATTT CCATTTGATG TCAAATCATA TGTCCATTGA GAAAATCTTG TTGTTACAAA AATACCAGGG TCTCGTACTT CACACTTCAA AAGAGAGTCT TCAAAAGATT GCTGATTGTA AGGTATGTCT ATTATCGAAT GCCAAACAGA GAAGTCACAA TCATCATTCA GAAAGAAAAG CCTCGAGAAG ACATGAGAGA CTTCATTGTG ATACTCTCGG TCCATTTAGG TCCGAAAATA ACAAGTGGTA TTTAACGTCT GTTATAGATG AACATACGGG TTACATTGAA GGAATTATTA CTAAAGACAG AAAGGTAAAG GATCTCTTAA TTCAACGATT AAAGATCTGG AATAATCGGT TTAACGATAA GGTGGCATAC TTCAGAAGTG ATAATGCTCC TGAGTTCCCA CAACCTTCTG ATTTAGCTGA GTTCGGTATT TGGAGGGAGA CTATAGCGGC ATATCTGCCT GAGCTTAATG GTCTCGCCGA GGTTGTTAAT AAATTGATTT TACAACAGAT TTACAGGATC GTTGTGACAC TTGGTCCACA AATACTCAAG TTGATTTATT ATGTGATTCA ATATTCTATT ACAATGATCA ACCACACTCC ACGTCGTTCA CTCAAGGGAC AAACCCCTTA TGGTTGCTAT TATCAATTAA GTGAGGGAAA TTTCTACCGG TTTCCTTTTG CCATCGATTG TGTCGTTACA TTTAGTAATG CCATCGAAAA GAACCGTTAC GGAGTTACAT CAACTAAAGG AGCTCCTTCA TCGATCATGG GTGCTGTGAT TGGCTACGCT AGCGATTGTT TTAGTTATTA CGTGTTGCTA AAAAATATGC GGTGTGATAT TATCCTTAGC CCTAATGTCC GTATATTGCG AAGCTATGAG GTTATTAACT CCTATCTCAA AAACTTATCC ACTACACCTA TGTCACACAT TGTTCCTATG GCTGAAGGTA TCCAGGGAAG GCAACTGGGC GCTCAGTACG AGGTACGCGG AACATATGTG GAAAGTGAAT ATGACAATAC AAATGACGTG ATGCACATGC CCAAAGAGTC ATATTCAGTT CAGCCAGCAT CGTTTACTTT AACTACGGGT AACAGTTCTA ACGAATATGT TATAAATGAT GATCCAGTAC AGATTACCAT TGAGAATCCC GATGATTTTT CTAACCCTCT TCAACTAACT GAAGAATCAC ACGATATGGT ATCCGAAGTA AAATCGGATG AGAATCCTAA ACCCAGTCTC CACGAGCTAA CACCTGGGGA TAATCCGGTG TCTAAACCTC CTCAACTTGG TACCGAGACT TCAGTAATAG GGAAGTCTAA AGAGCCTATT ACAAACCACA CAAAGGACGC CCCTTCCATC CAGGGGAGGG ACCATAAACG CCTGGAATCT ACTGCTCAGG TTGGACTATC ACACCAACCC CAGACTGGTA CTCCCGCTTC GGAGGAGTCA AAATTGTCAG GAACAGATCA TTTCGGTGTC GACGTTGTTA AAGAAACAGT CTCAGAAGAT TGGCATACTT CTGACTACCC AGAAACTAGT GCTGAAGATG AACAGCAAAA TCCCTCGTTA CTGGCTAATA AGAATCGGGT AACTGAAAAA ATAGATGAGG GAGAAAATAT TTCATTTCCG GGGGGTGATG ATGATTCTGT CGTGATCAAC TCAAATGTTG AGCAATCTAA TGTTGAAACA GAGGATGCTG GTAACAGTCC AATTCAAGAC GAAGTTTCTC AAGAGGGAAG AATACTTAAT GAACAAACTG ATATAGTTGA TACTGTTGCT AAAGTTATTG AGAATGAAAA AATCTCTCCT ATTAATTCAT TAGATGATCA TACTGAACTT GCTACAGACT CGGGAAATGA TAGCAATTCA ACAGAATCCG ACATTCAATC GAAAAATGAA ATATCACCAG TGATTAATGA GAAAAATACT GAAATAATCC AAAAACACAT TGAAAGTATC CTTGCTGATA AGAGATTGGA TGAATTTGAA ACGTATAATG TTGATGAAAT TGAGAATGTG ATTAATGACG ATGACATTGC TGAAGCTAAT CCACTACCAG ATGAAAATAA TGATGTTCAG ATGAATGAGA GTTTTGATAA TAATCATAGC ATGTCACGAG CAAAGAAGAA ATACACATTT GAGAAAGAAG TTAACGAAAA AATTGCTGGT ACTAAACATT CACTTGATAC AACTGATCCA AGAGAAGCAA TCAGAGTGTT AAATACTGGT GAAACCAAGA GAATCGAACC CAAGAAAAGA GAGGTGCCTA TCACTGTGAA ATTAAACAAA AGATCGCAAT ACAAGTCACC ATATGTTACA AGAAGTGGTA GAACGGTTAT AAACCCCAAG AGGTATTTAC ATGCGGTCGT CAACAAAATC GACTATAATG ATCCGGGATG GATAAAGTCA ATGAATGCTG AACTAGAGAA ATTTAGATCA AAAGATGTTT ACGAAGAAGT TCCAATTCCC ACCGGTGTGA AGCCTATATC TATGGGTTGG GTACATACTG AGAAAATTGA TTCTCTCAAA GGTGTTGTTC GGAAATCACG TTGTGTTGTC CATGGCAACA GACAAAAGGA AAAATTGGAT TATGACCCTT TTAGTGTTAG TTCACCTGTT ATAGATCTTG TGACTATAAG ATTATTGACA ATAATAGGTT GTGAATTAGG AATGACAATT CAACATTTAG ACGTCGAGTC GGCGTATCTA AATGCCTCTA TTACTCATTC AAATCCAATT TATGTCTTTC CTCCTAAATC AGTACCTTTG AAGAAAAACC ATTGTTGGTT ATTGAAACGT TCTGTCTATG GGTTAAAACA GTCGGGTTTG GAATGGTATC ACACTATCAA AAGAGTATTG GAAGACATTG GTTTTACTCA AGTTTTACAC AATGATGGTT TATTTCACAT TGAATATGAA GAGGGATCAG TAATATATTT AGGTTTATAT GTTGATGATA TTCTTATGGT TGGAAGTTCA CAAAAAGTTA TTGATAATTT TGTGGATCAA TTGAGAGATC ATTTTGAAGT TAAAGTGTTT GGTGAAATAT CAAATTATCT TGGTATTGAA TTTCGTAAAA CCGAATCTGG TTATATTTTA TCTCAAGAAA AATTTCTCAA GAAATTACTT AAGGATTTCA AACTAGATGA CTCATATGGG AAAAACATAC CCTGGATTCC GAATGACAAA TATGAAAAGG TTGCAATAAT TCGTGAAAAC GTTAATCCAG AGAATGATTT TGAAAAGGTT CCGAATGAGA CATTGCTTGA CCCTGATGCT AAAAAACTAT ACCAAAGTGG TGTTGGCCTG CTTTTATGGG CTGCCACAAA CACACGTCCA GATATATCGG TCGTAGTGAA TTCGTTGGGT TCTAAATCTG CAAATCCAAA TGTCCATGAT TATGAGAAAT TGATTTATTG TCTTAGGTAT ATCAAAAATA GCATGGGATA TCACATTGAG TACAAAAGAA ACAGATTGAA TATACCACCA AAATCATTTG TTATCGAATG TTTCAGTGAT GCGTCATTTG CACCAGGATT GGATAGAAAA TCTATTAGTG GAACTTTGAT TTATGTGAAT GGAAATTTGG TGCAATGGGC GACCAAAAAA CAAACGGTCA TAGCACAAAG CTCAGCAGCT TGTGAAATGT TGGCTCTAAA TTATACAATG TTGAAAGCTA TCGAAATAAA AAACCATTTA ATGGATTTGG GTTTTGAAGT AGGTAAGATA CATTGTCATC AAGACAACCA AGCTGTGATT AAAGTTTTGA GAAATAACTA TTGTCACCCA CATCGACCAA TAGATATCTG CTATAAGTTT CTACGCCAAT TGATCAATGA TAAAGTATTT TCAATATCCT ATGTGAAGAC AAATGATAAT TACGCCGATT GTATGACTAA GTGTCTAAGT CGTGCTAAAT TCAAAGCATT CGTTGAGGGT ATGATAAAAC GGTTAGACCT AGAAGATAAT CAAACACTGA TACAAAATGC AATAACGGCA GAATAA

Products

Productgag
Descriptiongag capsid polyprotein
MSSAKNDDNE GKVMESVDQA NAISKVDEHI KARFNMLFIK FNDLPKLAVG NQKSVDKWNE EFKYFHVAYP DVLEFLLDYN PKDKFKVKKV EGIYFTGWCL QMCLQSIFDR FRLIMISKLP KHLQKEANLI KAAYDAVTKS KDYTITSKIL SKFVNVEHEL VVCYNLPYLS QVEEKLEEIL YNTSNVVDEY VRSLPNLIGQ VLYFNHVKKS EALSLFLNIH ASYYSKWIQA DNDTSVLPSC STIAEEMCDH PDYARLVDIP SNKYELNLIV SLPAPEKPKG KPEENSSEQS QKKNSKSRKR NKKHPKSDND KGEKEKEKEK TSSE
Productgag-pol
Descriptiongag capsid polyprotein, RNA polymerase
Modifications973..975,aa:OTHER
MSSAKNDDNE GKVMESVDQA NAISKVDEHI KARFNMLFIK FNDLPKLAVG NQKSVDKWNE EFKYFHVAYP DVLEFLLDYN PKDKFKVKKV EGIYFTGWCL QMCLQSIFDR FRLIMISKLP KHLQKEANLI KAAYDAVTKS KDYTITSKIL SKFVNVEHEL VVCYNLPYLS QVEEKLEEIL YNTSNVVDEY VRSLPNLIGQ VLYFNHVKKS EALSLFLNIH ASYYSKWIQA DNDTSVLPSC STIAEEMCDH PDYARLVDIP SNKYELNLIV SLPAPEKPKG KPEENSSEQS QKKNSKSRKR NKKHPKSDND KGEKEKEKEK TSSEQKTGAA SINCVMNIHN CSKTTFPVEN SHSLNASLNV MNFKGLRFNK YLVYDTGATI SVVNNKDILS NVKDATIEVS VADGATLEAD CIGDLIIRVG IVSITLENTL YLPESSFNLV SLKQIEERGF NVLITKESVI VFNQNVAPTI IASRKNAADL YMGPQFSEES LECDFDYDGL ADMLSNANQD DKDKSSMNEM SEYQEHDYSS RALINSLTEV DVLDVEISPY GVEQLLPTGD KNDIYNFHLM SNHMSIEKIL LLQKYQGLVL HTSKESLQKI ADCKVCLLSN AKQRSHNHHS ERKASRRHER LHCDTLGPFR SENNKWYLTS VIDEHTGYIE GIITKDRKVK DLLIQRLKIW NNRFNDKVAY FRSDNAPEFP QPSDLAEFGI WRETIAAYSP ELNGLAEVVN KLILQQIYRI VVTLGPQILK LIYYVIQYSI TMINHTPRRS LKGQTPYGCY YQLSEGNFYR FPFAIDCVVT FSNAIEKNRY GVTSTKGAPS SIMGAVIGYA SDCFSYYVLL KNMRCDIILS PNVRILRSYE VINSYLKNLS TTPMSHIVPM AEGIQGRQSG AQYEVRGTYV ESEYDNTNDV MHMPKESYSV QPASFTLTTG NSSNEYVIND DPVQITIENP DDFSNPLQLT EESHDMVSEV KSDENPKPSL HELTPGDNPV SKPPQLGTET SVIGKSKEPI TNHTKDAPSI QGRDHKRSES TAQVGLSHQP QTGTPASEES KLSGTDHFGV DVVKETVSED WHTSDYPETS AEDEQQNPSL SANKNRVTEK IDEGENISFP GGDDDSVVIN SNVEQSNVET EDAGNSPIQD EVSQEGRILN EQTDIVDTVA KVIENEKISP INSLDDHTEL ATDSGNDSNS TESDIQSKNE ISPVINEKNT EIIQKHIESI LADKRLDEFE TYNVDEIENV INDDDIAEAN PLPDENNDVQ MNESFDNNHS MSRAKKKYTF EKEVNEKIAG TKHSLDTTDP REAIRVLNTG ETKRIEPKKR EVPITVKLNK RSQYKSPYVT RSGRTVINPK RYLHAVVNKI DYNDPGWIKS MNAELEKFRS KDVYEEVPIP TGVKPISMGW VHTEKIDSLK GVVRKSRCVV HGNRQKEKLD YDPFSVSSPV IDLVTIRLLT IIGCELGMTI QHLDVESAYL NASITHSNPI YVFPPKSVPL KKNHCWLLKR SVYGLKQSGL EWYHTIKRVL EDIGFTQVLH NDGLFHIEYE EGSVIYLGLY VDDILMVGSS QKVIDNFVDQ LRDHFEVKVF GEISNYLGIE FRKTESGYIL SQEKFLKKLL KDFKLDDSYG KNIPWIPNDK YEKVAIIREN VNPENDFEKV PNETLLDPDA KKLYQSGVGS LLWAATNTRP DISVVVNSLG SKSANPNVHD YEKLIYCLRY IKNSMGYHIE YKRNRLNIPP KSFVIECFSD ASFAPGLDRK SISGTLIYVN GNLVQWATKK QTVIAQSSAA CEMLALNYTM LKAIEIKNHL MDLGFEVGKI HCHQDNQAVI KVLRNNYCHP HRPIDICYKF LRQLINDKVF SISYVKTNDN YADCMTKCLS RAKFKAFVEG MIKRLDLEDN QTSIQNAITA E

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