Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200237"

Accession numberr200237 [export]
Locus namereplicase
Recode1 namepol_r_vir_bortrytis
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBotrytis virus F [details]

Sequence

GenBank IDsAF238884.1
SequenceRNA of 6827 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 4,192)
Descriptionproduction of fusion protein and set the ratio between two protein products
GATTAAATTC ACATCCAACA GACACAGACA CCAAACACCA AACGCCTTAA TCGTACAGCC ACCATGGCTG TCCCGTTGGA GCGTGCCTTC GCCTCGGTCA CCCAGTCTTT CCACAAAGAC GCGACCCAAG GCCCTACCAC CAACGAATAT CTGGTTGCCC GCGCTGAAAC ACAACGCTAT GCACCATACG CCGTCCGCAA AGGACCGGCT GCTCTGCTCG CCCAGGTTGG TATCAATACC ATCCATGACT CCCCGCTGTC CCACTCCCAC CCGGCCTGTT ATGCCCTCAA TGCATTCCAC TTCCTTAAGG TTATCCCTCG GTACTTACAT GGCAAGGCTG AGGTTTGGGG CACCAAAGAC AACTGGTTCA GAAAACTACA AGCGCAAATT GACAGCCAGA CCACCACGCT CACACATCGG AATTATGCCA TCACCGCCAG GGATCACGTC CGCTACCCTG GAACTGTCGT CGACCATCCT GGATCATGCA CTGCTGGAAC ACTTTTTATG CATGATGCAC TACAGTACAT GACCCCTCTT GATGTCTACA CTTTGTTCGC CACAAGTCCG GAGATGCACT CTCTCGTCGC CACCGCTGTT ATCCCGCCTG AATCTGTTGA TCGCCTGCCC GCTTTCTGGC CTGAACTTTA CCAACTGGCA TACTATGAGG ACCACCTTTG CTATGCACCT GATGGGAACT TCGCTGACGC CTACAACCAA CCCTTAGCTG CTCACCAATG GATGACCATG AAAAGTCTGC ACGGCCCTGA TTTCACGCTT TCCGTCGATG TACCCGCCAG TCGTTATAGC CACCATATCT TTGTCATATC CAAGCGCCCT GGTTTACCTG ACACGCATCG TGACTTCATG TGCCCCGACT TAGTCGAGCT GCCTAAAGAT TTTTTCCCAG GTGCCAATAA AGCAGACAAG CTACTCCCCC GCACGCTGGT TAACCAAATG GTTGAATACG CAGCATCTGT CAAACGAGCT ACCATCAAAG ACGCCACTTC CAGGACCCGA GCATATGTTA AAGACCAAAA ATATGCCGCC GTAACCCCGG TTCAACAGAT GTACCTCTCT TGGTTCGGCT CTGGTCTGTC GCAAATGCAA TTCCCTGACC GCCCTGTCAC CCCACTGGAC AATTTCGCCA CTGCCCTATG GTACCGCTTG CTCCCTTCCC GCTTGTACCG ATTACCTGCC ACTATCCGCA ACTTCCAGCT CAAAGCCTTT GTTGATCAAC TACGTACCCC CCAATACCTG TTGCACTTCA AATTAGATGA GTACCACTTG AGCAGCAACG ACAAGTACAG CGACTTCTAC CGCAATGAAT CAAGACAAGC CAGCAGCAAA GACATGTTAT CGGCATTTGA AGCAATTTGC TTTGGCGGGG CCCCTGAACT TGAAAAGAAG ATCCTTGGCA ACAACAACCC AGCACCGTTC GCTACTGTCC CTAATCCGCC GAGCCAAACC GCTCTCGGAC TTGCCACTAT CACTGCCGCA ATTGCCTTCA TTCTGCCTAA TCGCGCTGCC CGCTTAACCC GCTTAGTCGC TCGCTATGCT ATCAGAGCCG TCAAGGAAAT TGTAAACCCT TCTTTTTTAA CCATCCCCCG GTTTGGACTG TTGTCGCACT CAATCGCCAG CTGGCTGCAA ACCGATGGAG CGGTGATAAC CTACGGCCTA GCTCCGAAAA TCGCCTCCTG GTCAGCTCCA ATCTGGTACA ACGCCGCCCT CCTCGCCCCC ACTGATATGC GATCTTGCCA AGTTTTAGTC GACATAGCCA ATGATCTGCG CTTTGACTAC CGCTATGGAA CCATGCGACT AGCTGTTACT CTTGGACTCA CACTTCTCAA CCCGTTTCTG CGCAGACTTG TTCTCTTACC CTTTAAAGTC CTTTGGCATA GCTACCTACC GTCAATTAAA AACAAGCTGG ATTCAATGGT TTTAATGTCG ATCTCAACCC TGCCTGACAA TATAAGCGTC CCCCTGCTCA CACTCCGCGG GAATTTGAAT CGCCAGCGAT GTCCCGATAA CAAGGACCCA ACCCCTATCC ATGAGTCTGA TGACAATTCC ACCGCTGATG ACAAGTGCTT GCACTGCCCT ATTCACTGCC TCAAATCCAA GCTTTCTGAA CCCGCCGCCA GCCCTGACAC TGTACCGGAA GACAATCCCC TGCAGGAAGG CGATCTCACT GAAGAAGTCT ACGCGGCCGC ACTTGCAAAG AAGGATACTC CCCCACCATA TCCCACCCGC AATGACTGCC TATTAGTAGC ATTGGCTGAC GGCCTGCTAA CCAAGCGTAT CCTTTGGTTT TCTTGCATTA AGATGTTCGG TAACACCGCT TGTTGGGTTA TCCATGACAC TGGCAAGGCC TTTGACTGGA TGCACCTTAA AATGCTTGCT GAACAGCTCA AACTCAATGT CTCCATTGAG GTCGCTGCTG AACATGACCA CCATTGGACT GGACTTGCCA AACGAGTAGG ACCCATCGAC GGGAGAAAAA TTGCACTCCG TTGGTACCCT TACCATTGGG AACTCTCTGA CCGTGGACGA GAAGACTATG GCCCACCCCC ACCACCACCA CCTCCTTCAA CCACTGAACC CCCGCCCCCG CCCAACCCCC CTGCAGCTTC ACCGTACCAC TCACCAACTG TTGAAGATGA GCCGCTTGAA GAAATACCAT TGGCTAACAG CAACGGTGAA TTTTCCACTT TCGCATTTGA TGACATGGCA GCAGATGACC TCAATCCTGC ACAACCACTT TCCTCCCTTG ACCTTGATGA AGAGCCCTCT GCCAAGCAAG AACCTTTGGA GCCTGCCGCT ATTAAAACCT CTGAGCCTGA GCCTTTGGTA CCTGAATCTG AAGAGGTTTT CTTTCGCCCC TCCCCTACCC CAACTCCTTC TGACGCCACA CCCACGCCAG CCGCGCGTGC ACCTTCATCC GTGAGCAATG AGAACGCCCA GCGCCCACGC CATCCACTCC CCCCGGTTCC AACTGGTGGC GCCTCTGCCC CTAGCAATGA CAAGCTCAAC TCGGCTGCTA AGCAATATGC TCGACTCGTC GCAGGTAAGA CTAGACAAAT GACTGTTGCC CAACCAAGAT CTAAAGCTTA CCTTCGCGAC CTTAAACGTG GCAACATTGG CACTATCCCC ACCGCTGAAG CTGAACAACT GGATGCATAC ATAGACTCCT GGGCCGTCAA TGGATTCAAC CGTAGTGTTC ATGTGATATA TTTTTGTGGC TTACCCGGCA CTGGCAAATC TCGCCGTTGC ATGAAGATGA CTGAACGATT ACTTAAGGAG AACAAATATT TAGCTCAAAC GGTACGCATT GTTACCCCCA CAGACAACCT ACGTAACAGC GTGGCGAGAC AATTGAAACC CCCCACTGAA AGCAGCTACT CGGTACAGAC ATATGAGACA CCCATCCGAC AACCGAGCCT TGGACCTGTC TTGATCGTTG ATGAGTATGG TAAAATGCCC GCCGGATGGC TTGAAACTGT TCTATTTCTT AATCCCCGTG TTCAAATGGT GATCTTCACT GCCGATCCAA CCCAAGGCAT ATTTCGCACA CGCATCCCTG ACGCCTATTG TTGCCGCATT CCCTCTTCTA CTGAAGCCAT TGCCAGTTAC GCCCATGAGT ACCGCCGCGT CAGTGATAGA CCAGCCCCCG GCGTTGCCCG AGCTCTTGGG CTGCCCACCA CAAGTCGCCG CCCTGGTCAA ATTGAAACAT CGACTGAACT TAACGTTGAC TGGATCACTG TCAGACCTGA AGGCGAACGA GCCGCATGGC ACAACACTTG GGGTGGCAAG GTTTACACAT ACGCGACCTG CCAAGGTGAG ACCTTCCACC GAGCTTACCA GATGGTGATC AATGGCAACA CCCGCTTCTG GGACGATCGC GACCTTTTCG CAGCGCTCAC ACGCGGCTCT GGAACCCTCC GCCTCATCTA TGAGACCCAA AGCAGCAAGC CCCTCCCGCG AAGTACTTCT AAGCTCTACA ACGCCCTCTT AGATTTCCGC ACTGACCCCC ACAAGCTCCC CCTGGCCATT GAAGAACATG TCAACCGGTA CATACCCAGC CACCTTCGCA ACGTCAACCA AGCCGTCCCG CGCCGCAACG CTGCCAGCAA CCCTGACGCT CTGCCAAGCC AGCGCATACT CCCTGGGGGC CAATCCACCA CTGCTGAACC ATGACAATCA CAGGCCAGCG CGCTGCCCAC TGGAGGAGAG GCCATTGACG TCCCTGCACT TGACCGGCAA GACCCGCAAC GCTTTCCACA GCTAAAAGTC TTACCTCATC TTTGCGGTTA CATTGGCGAT TACTCAGAAG CCTCTTACCC TGAACCTGAG CACCCCAAAA CGCAAATGCT AGACGCCACT TTCCCAACCT ACCTAGCTCG CAACCGCGGC TGGAATGACC CTGCGCTAAC TGATGCGGTC ACCGCCAATT ACAAGGCCCC TGAACACCGA GACATTTGGG TCGAAGCTGT TGGCGAAACA ACCAGGCAAG TACATGGCAG TGGAGATGAT CGCGACGTCT TTCTAGAGCA TCGCGGCGAT GACAAAGCAA CAGCCAACAT AACCTATGCC AAACGATTGA GGTTTTCTCA ACGCGCCGCT AATGAACGCA GCATCGCTGC CACTAAGGTC GCCGGCTCAG AGCTCTTTGA AGCTTTCACA CGCGCAATCC CGCTCCCTCA GGAAACGTTT AATGACTCGT TGCTGGAAGA ATGCCGCACT GAAAACGACA CTGTGCATCT CACCAGTAAG CCACTCGCCA CGCTCATCAA CAACGCTGAA CGCTCTGACC CTTCTTGGTC TCTAAACATG ATCAAACTGT TTATTAAGGG CCAAACTGTC AAGAAGTTAG AAAAAATGGG TTCTGATGCC ACCGCTGGAC AAAGCATTGC CTCCTTCCGC GCAGAAGTAC TATTGGCTTG GGGACCTTAC GCCCGCTACA TTGACCGACG CATACGAGCA CTTCTGCCGC CACACGTCTA CATCCACAGC CGCCGCACCA ATGAAGATTT TGAGAAATTC GTAGCTGCCC ACTGGGATCA CACACGGGAA TCGACCGATG GCGACTACAC TGCGTATGAC GCTTCGCAGG ATGCAACTTT TGTCAACTTT GAAACCCTCC TCATGCGCCG GCTCGACTTT CCTCTGGACA TCATTGAAGC ATATGTGGAA ATGAAAGCAT CAATAACCTC ACACTTCGGC CCACTTGCCA TTATGCGCTT CTCTGGCGAG GTATGGACCT ATCTTTTTAA CACCCTTGGC AATATTGCAT TTACCTATGC CAAGTATGAG GTACCCTCCG TAGCCCAAGT GTATGGAGGC GATGACAAGT CAATCAATTC ACCAATCACC GTCCGCACTG GTTGGTCGCA GCTTGTTGGC AAATTTAACC TGGTTGAGAA ACCTGTTGTT GGCTATGAAC CCACTTTCTG CGGCTGGCGC ATCGTCCCAG GCGGCATCGT TAAAGACCCG CAACTCTTAT TCTGGCGCAC ACGGTACGCC CGAATCAGGT ATGATGCAGC ACTTTGGGCA CCCGGCTACT ATGATGAACT GGTGTTATCA CTTAAAACTA GCGACCGCCT GATGGACCAC ATGAGCCCCA ATGACTTAGC GTATTTACAA GCCCTTGTTC GCTTCTACAC TAAGCTCAGC CGTAGACTCC CCAGCCTCGC TGACCGCCGC CGCTGCAATC CACTCCCAGC TGATTCTCCC TCTGTGGTCC TGTCCCGCGA CTAGACCTCA CCCCACGTCC CTCTACCCTC CACTAACCCC TACACACTTC ACCGCCGACC GTATAGAGTT TGAAATCCCA ACACGATATC TCACGCTATG ACAACATCAC GCTTCGCCAC GTTCGACATT GAGAGCGAGA CCGGTTTAAC CCCCGGCGCT TATCCCGCTC CACTACCGAC CCTGGAACAA CAACTGCATG ACCGAAACGC CATACTTGCA GCCATCCCCA GCCTGGCACG CGCTAAACTT GACGCGGCCA CACTGAAAAG ACGTTTCGCC AACTTTCTTC TCACCCTTGG CATGGTTGGA ACAACCAGCA AGGGCAGCTA TGAAGAACTT ATTATCCCAC CAGTCAAAGG CATGGGCAGT AGCACAGGAT TTCGAGCCCG CGAACTGGTC CAAATCATCA CCAGTTCACC TGCTCCCCCT GGCTTTGACG GCAATCAAAC CCTCCGACAG TTTGCCAGAC CGTATGCACC ACAAGTGCAA AACATGATCG CCCAAGGAAA GTTTAAGACT AACTTGTACG ACAAATACGG CAAATCCGTC GGCGCACCAC CCCACGTGTG CATCGACTTC AATGATGCCA TGGACTTGCA AATGTTCCAC TCAACCGCTG AATTTGAATC AGCGCATAAA GTCCGTGAAT TAGCCATCGC TGAAGCCTCC GCCCGCGAGA ACGCCCCGCG CCCAGCCGCC AACCCCCGGG CCGCCAAGCC CATCATTGGC CAAACCGCTC CTGCCTTTCA TAGCGGCGAC GCGGCCAAAC AGAGTGGCGG ACAGCCTGTC AACATCAAAC CCAGCTTGGC TCAATCAGCC GGCTTTGATA GTCACCGCCC ACCACCTGAG ACCCCTCCCC GAGCCGGCAC CCCGAGCTCA CAAAAGTCGG GCCAAAGTGG TCAAACGACC ATCCAACCCC CGGCCTCCCA TGGGATACTT TCAGGCATGC TTGGATCCCA CAAGAGCACC CCTCACTCAA GTCCCCAACA AACCCCCAAG AAGTGACCTC CGCTTTCACC ACCGGGCCTC TAGCGGTTTC TTGCCCGCCC AGCTTTACAC TTCGTTGCAC ACGAGGC

Products

Productgag
Descriptioncapsid polyprotein
MAVPLERAFA SVTQSFHKDA TQGPTTNEYL VARAETQRYA PYAVRKGPAA LLAQVGINTI HDSPLSHSHP ACYALNAFHF LKVIPRYLHG KAEVWGTKDN WFRKLQAQID SQTTTLTHRN YAITARDHVR YPGTVVDHPG SCTAGTLFMH DALQYMTPLD VYTLFATSPE MHSLVATAVI PPESVDRLPA FWPELYQLAY YEDHLCYAPD GNFADAYNQP LAAHQWMTMK SLHGPDFTLS VDVPASRYSH HIFVISKRPG LPDTHRDFMC PDLVELPKDF FPGANKADKL LPRTLVNQMV EYAASVKRAT IKDATSRTRA YVKDQKYAAV TPVQQMYLSW FGSGLSQMQF PDRPVTPLDN FATALWYRLL PSRLYRLPAT IRNFQLKAFV DQLRTPQYLL HFKLDEYHLS SNDKYSDFYR NESRQASSKD MLSAFEAICF GGAPELEKKI LGNNNPAPFA TVPNPPSQTA LGLATITAAI AFILPNRAAR LTRLVARYAI RAVKEIVNPS FLTIPRFGLL SHSIASWLQT DGAVITYGLA PKIASWSAPI WYNAALLAPT DMRSCQVLVD IANDLRFDYR YGTMRLAVTL GLTLLNPFLR RLVLLPFKVL WHSYLPSIKN KLDSMVLMSI STLPDNISVP LLTLRGNLNR QRCPDNKDPT PIHESDDNST ADDKCLHCPI HCLKSKLSEP AASPDTVPED NPLQEGDLTE EVYAAALAKK DTPPPYPTRN DCLLVALADG LLTKRILWFS CIKMFGNTAC WVIHDTGKAF DWMHLKMLAE QLKLNVSIEV AAEHDHHWTG LAKRVGPIDG RKIALRWYPY HWELSDRGRE DYGPPPPPPP PSTTEPPPPP NPPAASPYHS PTVEDEPLEE IPLANSNGEF STFAFDDMAA DDLNPAQPLS SLDLDEEPSA KQEPLEPAAI KTSEPEPLVP ESEEVFFRPS PTPTPSDATP TPAARAPSSV SNENAQRPRH PLPPVPTGGA SAPSNDKLNS AAKQYARLVA GKTRQMTVAQ PRSKAYLRDL KRGNIGTIPT AEAEQLDAYI DSWAVNGFNR SVHVIYFCGL PGTGKSRRCM KMTERLLKEN KYLAQTVRIV TPTDNLRNSV ARQLKPPTES SYSVQTYETP IRQPSLGPVL IVDEYGKMPA GWLETVLFLN PRVQMVIFTA DPTQGIFRTR IPDAYCCRIP SSTEAIASYA HEYRRVSDRP APGVARALGL PTTSRRPGQI ETSTELNVDW ITVRPEGERA AWHNTWGGKV YTYATCQGET FHRAYQMVIN GNTRFWDDRD LFAALTRGSG TLRLIYETQS SKPLPRSTSK LYNALLDFRT DPHKLPLAIE EHVNRYIPSH LRNVNQAVPR RNAASNPDAL PSQRILPGGQ STTAEP
Productgag-pol
DescriptionRNA-dependent RNA polymerase
Modifications4192..4194,aa:OTHER
MAVPLERAFA SVTQSFHKDA TQGPTTNEYL VARAETQRYA PYAVRKGPAA LLAQVGINTI HDSPLSHSHP ACYALNAFHF LKVIPRYLHG KAEVWGTKDN WFRKLQAQID SQTTTLTHRN YAITARDHVR YPGTVVDHPG SCTAGTLFMH DALQYMTPLD VYTLFATSPE MHSLVATAVI PPESVDRLPA FWPELYQLAY YEDHLCYAPD GNFADAYNQP LAAHQWMTMK SLHGPDFTLS VDVPASRYSH HIFVISKRPG LPDTHRDFMC PDLVELPKDF FPGANKADKL LPRTLVNQMV EYAASVKRAT IKDATSRTRA YVKDQKYAAV TPVQQMYLSW FGSGLSQMQF PDRPVTPLDN FATALWYRLL PSRLYRLPAT IRNFQLKAFV DQLRTPQYLL HFKLDEYHLS SNDKYSDFYR NESRQASSKD MLSAFEAICF GGAPELEKKI LGNNNPAPFA TVPNPPSQTA LGLATITAAI AFILPNRAAR LTRLVARYAI RAVKEIVNPS FLTIPRFGLL SHSIASWLQT DGAVITYGLA PKIASWSAPI WYNAALLAPT DMRSCQVLVD IANDLRFDYR YGTMRLAVTL GLTLLNPFLR RLVLLPFKVL WHSYLPSIKN KLDSMVLMSI STLPDNISVP LLTLRGNLNR QRCPDNKDPT PIHESDDNST ADDKCLHCPI HCLKSKLSEP AASPDTVPED NPLQEGDLTE EVYAAALAKK DTPPPYPTRN DCLLVALADG LLTKRILWFS CIKMFGNTAC WVIHDTGKAF DWMHLKMLAE QLKLNVSIEV AAEHDHHWTG LAKRVGPIDG RKIALRWYPY HWELSDRGRE DYGPPPPPPP PSTTEPPPPP NPPAASPYHS PTVEDEPLEE IPLANSNGEF STFAFDDMAA DDLNPAQPLS SLDLDEEPSA KQEPLEPAAI KTSEPEPLVP ESEEVFFRPS PTPTPSDATP TPAARAPSSV SNENAQRPRH PLPPVPTGGA SAPSNDKLNS AAKQYARLVA GKTRQMTVAQ PRSKAYLRDL KRGNIGTIPT AEAEQLDAYI DSWAVNGFNR SVHVIYFCGL PGTGKSRRCM KMTERLLKEN KYLAQTVRIV TPTDNLRNSV ARQLKPPTES SYSVQTYETP IRQPSLGPVL IVDEYGKMPA GWLETVLFLN PRVQMVIFTA DPTQGIFRTR IPDAYCCRIP SSTEAIASYA HEYRRVSDRP APGVARALGL PTTSRRPGQI ETSTELNVDW ITVRPEGERA AWHNTWGGKV YTYATCQGET FHRAYQMVIN GNTRFWDDRD LFAALTRGSG TLRLIYETQS SKPLPRSTSK LYNALLDFRT DPHKLPLAIE EHVNRYIPSH LRNVNQAVPR RNAASNPDAL PSQRILPGGQ STTAEPQQSQ ASALPTGGEA IDVPALDRQD PQRFPQLKVL PHLCGYIGDY SEASYPEPEH PKTQMLDATF PTYLARNRGW NDPALTDAVT ANYKAPEHRD IWVEAVGETT RQVHGSGDDR DVFLEHRGDD KATANITYAK RLRFSQRAAN ERSIAATKVA GSELFEAFTR AIPLPQETFN DSLLEECRTE NDTVHLTSKP LATLINNAER SDPSWSLNMI KLFIKGQTVK KLEKMGSDAT AGQSIASFRA EVLLAWGPYA RYIDRRIRAL LPPHVYIHSR RTNEDFEKFV AAHWDHTRES TDGDYTAYDA SQDATFVNFE TLLMRRLDFP LDIIEAYVEM KASITSHFGP LAIMRFSGEV WTYLFNTLGN IAFTYAKYEV PSVAQVYGGD DKSINSPITV RTGWSQLVGK FNLVEKPVVG YEPTFCGWRI VPGGIVKDPQ LLFWRTRYAR IRYDAALWAP GYYDELVLSL KTSDRLMDHM SPNDLAYLQA LVRFYTKLSR RLPSLADRRR CNPLPADSPS VVLSR

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