Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200238"

Accession numberr200238 [export]
Locus namecoat protein
Recode1 namepol_r_vir_bsbmv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBeet soil-borne mosaic virus [details]
AcronymBSBMV

Sequence

GenBank IDsAF061869.1
SequenceRNA of 4616 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 719)
Descriptionset ratio of coat protein:assembly protein
GGATTCTAAT TATTATCTCC ATTGAATAGA ATTTCACCAA CTATTGTCTG ATATCTTGTC CTGGGGGCAA TTTTATTCAG TGCCCTAACT TTGGAAATAC GTGCGAGTAA TAAGTAGCCC CCGTCCAGGA GAAGTTGCTT ACAATATGGT TGATGAAGGT AGATATATGA CATGGAAAGA TGCAACTCAT AATAAGTTGA TGACCGACCG ATGGGCACGC GTATCAAGCG TCCAGGCGAC CATTAACCAG GCTTTGAGCC TCGATCTGTC TAAAGCCGCA AGCTTACCTG TTATTAAGGC CAATTTTAGT AGTCTCGGTG CTAATTGGTC TGAAGATGGT GATGTGTTTG TGGCACCTAT GGTTCGGTTT CCAGTTACCC TCAATCAATT TGGTGCATTG GTTTTGTGGC TCAACTTATC TGACCCTGCT TTCGCTATTC TTATGACGAA AGTTTTTACG TTGACTAATG CCGGTGGAGC CGACAATGCC TCCGCCAGTT CACGTCGTGA AGTTGTGGCT GGGAGCCGAC CCGAAACTTC TGGTAAGTCT GTAGGTACCG ATGAGAGTGG CAGTTATACT TTGACCACCA CTTTACAAGC TTTTAATCAA GCTATCCGCT TACCTGAGGT TCTGTGGACT CGTGATAAGT TTGAACGGGA GTGGAATCTG CCATGGACCC CTACTAGGGG TGTTACTCCT GCCGTTCCAC GCACCAATTA GCAATTAAAT GCTGCTCGAA CTATGGCACA TATTCGAGCA GCATTAAAGG CGCGTCTGTA TCCTGGTGAC AGTATTGAGT GGGTTGGATG GGTGCATAGT TACCCCCCTC CACCATATGA TGGGTACGAT GTTCCGTCTT TAGATATTAT TAATGAGAAA CTTGCTGCTG ATGATGTTGG TGGTTTGGTG TTACCTACAC CTGATATTCC TGGTGGTCCC AATTTTGAGG TCTCCGAGGA TATTGAGCAA ACTGGTCGGA ATGGTTTGTG GTTGATGGTC GGGTTGCTAT TAGCTGCCTT GGCTGTTGGT GTTGGGACTG CTGCCTACCA TCGTCGCAAG TTGCGTAGTA GGTTAGTTGA ACTAAAGAGT CTATGGTTTT CTAGGGGTTC TGGTGGCGGC GGTGATTTCA CTGTTGAGTT ACCAACTAGA ACTACTGATG CCTTTAGTTT AGGTACCACT ATTTCTGAAC ATGCTCCACC TCCTGTAGGT ACTATGCGTC ATCGTTCGAC TACGGCGACT GATAGTCATG AGGCCCTTCC TTTTGAAACA TGGGTTTATT TAAATCTCTC TCGTGTGTAT TTTAGTATCG GGTGTTCTGA TCTCTTTTAT GCGACTAGAG AATTTGTTAC TGTGTTTAAT GGGGAGTTTG AGGGTCTTAT CGAACTACTT GAGGCGTCTG ATGAGGATGA TGGTGTTTAT ACTGATGCTG AGAGTGCTGT CATTGTGGGT ACTAGTGCTA TTGTTAATGA CCACGATCAA TTTGATCTCA ATACTGTGAT TCTTGAAAAG CGCATAAAGT TTAAACGGCT TTCTTTAGAG GAGGCGGAAC TTAATCGTCA GGAGTCTGTG ACCATCGAGT TTGCCGATGA GGAACGTCGT ACGCTCATGC ATAAGTTAGA AAGCGATAGA CTTGAGGCGA CGCATAAGGT GAATAAGGCT GCTGCTGATG CTGAGGCAGC TCTATCAGTT GCTGTTCTGG CTGCTAAAGA GGCTCGTACT TATGATGATA AATTGGCTTT TGATAGAGCT TGTAAGGAAA AGGAGCTAAG GCTAAGAGAG CTTGAGGTTG AGCGTATGCC CGGGAAGACT GAAAGATATA TTCACACAGG TATACAAGGT GGTGCTCAAC TCGCTGGTGC TTTAGCTGTC GGTAGTATGT TACGAACACG TGGTGTTAGT AATATAACTC CGAGTAATGC TAGTGGTAGT CCTACCGGTA TTGGTCGTGT TCGTAGTGCT TCTCAGCCCG TACCCACTAG TTTGTCTGGT GGTTCTGTTC TGGGGGCTAA TAATAATAAT AGTGTTGGCA GTGTTAGTTC AGGAAGTAGG GTAGAGTCGT TAGGGTATAA TTCGGCTATT CGCAATCATA ACACCTTTTG GTCCAAACTT CGTATTGGAA GTGAATGGCG CCAGAACAGC ATAAGCAGAA TGCAAGCGAG ACCGCTAGCG GGCGGCGGAA TTCCTCCGTC CGCTCCCGCG GTATGAGTAA GGATGACTGG TCTGTCACCC ACCCAGATGA TGTTTTCTCT ATTATTGAGA AAACATTGGT GGAGGATGGG TACAAATGGC ATGGGGTAAA ACCCGGTCAT TGCGATTGGG ATAAGCTAGA GCAGTCTGGT GCTATTAAGA ATTTTAAAGG TACTTTAGAA GGCGAGGTCG ATAGTAGTTG TTCATTAACA TGTAACGCCG CGGCAATTAA GTTGGATATA GTAGAAAGAT TAGACGTGTC TTCTGACTGG TCCGCTCGGG TAGGCATTGT GTTAGGTGCG CCTGGTGTTG GGAAATCGAC TTCAATTAAG CACATCTTGG ACACTTATGG TTCTCGTTAT AAAATGGTGT TATGTTTACC AGTCAAACAG TTACTCGACG GGGTGTTTTC GGGTAGAATG GACACTTTTC TGATTGATGA CATATTTAGT CGCTCTGTAG ACTATGGTAA GTACCACACT ATGTTAGTAG ACGAGATCAC TCGCGTTCAT ATGTGTGAGG TCCTGGTGTT GGCTGGTTAT TTAGGCATTA AAAATGTTAT ATGTTTCGGC GACCCTGCAC AAGGTATTAA CTTTAAGGCA GGGTCTGCTG TTAACTATAA CTTTCCTGTT ATTGCTGAGT GCTACTCTAG TCGTAGGTTC GGGGTTGCCA CGGCTGATCT CATAAACTCC TGCAATGGTG GTGGGAAATC AGTTGTTGGT AATAACGATG TTAAAGACAA CTGGACATTT GAAGAATTGT GCGGTAAAAT CGAGGAAATG TCCACTGTGC TTGTTGCAAC ACACGCCACA AAGGAGTTCT TAGCTGATGA TGGCATTGAA GCTGTATATT ACGAAGATGC ACAAGGTATG ACTTATGATG TGGTTACCAT TGTGCTTAAG GATGAGTTTG ACGACGATGC CATCTGTGAT AGCAATGTGA GAGCTGTGTT GTTAACTAGG GCTAGAAAAG GCGGTTTACT TAAGGTTGAT CCTAATATTG CGGCCAGGTT TAAAAATGGT GATTTTAATT CACGTGGAGT TAGTAAGGCT TGCACAGGTG ATACCTTTTG CGAGGATAGA TAATGTCTAG AGAAATAACG GCCCGTGCTA ATAAGAATGT GCCTATTGTT GTTGGTGTTT GTGTTGTTGC TTTCTTTGTA TTGCTGGCTT TCATGCAACA AAAACATAAG ACGCACTCTG GTGGCGATTA CGGGGTTCCA ACTTTTTCGA ACGGTGGAAA GTATAGGGAT GGGACTAGGT CTGCGGACTT TAATAGTAAT AATCATCGTG CTTATGGCTG TGGAGGTTCT AAATCTAGTG TGACTGGCAA GGTTGGGCAG CAGCTGCTTG TGCTTGCCCT AGTAGTAGCT GTCTTTGTTT TGTTCATGCG TGGTTGCTGG TCCTCTCCTG AGCATATTTG CAATGGTTCT TGTGGTTAAG GTTGATTTTT CTACTATAGT TTTGTATATA GTTGCTGGTG TTGTAGTTGT GAGTGTGCTG TACTCACCAT TCTTTAGTAA TGAAGTGAAG GCTGGCGGTT ATGCCGGTGC CATTTTTCCA AATGGGGGTT GCATTATGGA TAGGAATTCG TTTGCACAGT TTGGTGGTTG TGATATCCCA AAATATGTGG CTGATTCTAT CTCTCGTGTG GCCATCAAGG AATTAGACGC CGATATAAAA GCCGACTTGA ATAGTGTTGT TGCTAAAAGA GTAGTGTTGT ACGAAGGTTT GGCACAGTTA TGTTATAGGG TTTTCTCTTG GTTGGTGTGT TTGTTCATGG TGTGTTTAAT GTTGTTTGTG TGGTTTTGGT ATCATAGTTA ATTAGGTGAA CGCATCTTAT TATTAGTAAT GGAGAAAAGT AATAGCATAG GGGTGTATGT TAAGGACCCT ATCACAAATG ATTGTAGGTT GTTTAGCGTT AAATGTGGCA ACTGGTGCTT ATTCACAAAT CATGTTTTTG TGACTTACCG TGGAAAGAAC GATGATGAGA AAGTCGTTAA AGACACGTGT AGGTTGCATT TTCACGTAAA ATGTGTATCT TGCTCCAGTA AAGTCACTTT TAAAGCGAAC AACAGAGATC ATTTGGAATG GTTGTCTAAA GGTTTCGTTC GTGTTAATAG AAATTTTTCT ATTGTAGGTG CTTGTAGTAA GTGCCGCGGT GTGTTTGATA GTTGTGCGCA GCAAGATGAG TTGGACAACA ATGTTGTCTA ACTCTTTAAA GAGACTGTTG TATATATAAT AATCAGGGCC ATGCCACAGG CCTCCCATTG GGTTGTTCCG AGGGTTGTTG TGGTGATATA AATGATATTA TTAATAATAA TAATAGTGTC ATCGGTAATA TATTATTGTT ACTGGTGTTA AGGTTGTAAT GTACTGACCG GGTGTGAATT GTACCGGTCC TTGTAGGGTT TATTTTCAGT TTATTG

Products

ProductCP
Descriptioncoat protein, virion assembly domain
MVDEGRYMTW KDATHNKLMT DRWARVSSVQ ATINQALSLD LSKAASLPVI KANFSSLGAN WSEDGDVFVA PMVRFPVTLN QFGALVLWLN LSDPAFAILM TKVFTLTNAG GADNASASSR REVVAGSRPE TSGKSVGTDE SGSYTLTTTL QAFNQAIRLP EVLWTRDKFE REWNLPWTPT RGVTPAVPRT N
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications719..721,aa:OTHER
MVDEGRYMTW KDATHNKLMT DRWARVSSVQ ATINQALSLD LSKAASLPVI KANFSSLGAN WSEDGDVFVA PMVRFPVTLN QFGALVLWLN LSDPAFAILM TKVFTLTNAG GADNASASSR REVVAGSRPE TSGKSVGTDE SGSYTLTTTL QAFNQAIRLP EVLWTRDKFE REWNLPWTPT RGVTPAVPRT NQQLNAARTM AHIRAALKAR LYPGDSIEWV GWVHSYPPPP YDGYDVPSLD IINEKLAADD VGGLVLPTPD IPGGPNFEVS EDIEQTGRNG LWLMVGLLLA ALAVGVGTAA YHRRKLRSRL VELKSLWFSR GSGGGGDFTV ELPTRTTDAF SLGTTISEHA PPPVGTMRHR STTATDSHEA LPFETWVYLN LSRVYFSIGC SDLFYATREF VTVFNGEFEG LIELLEASDE DDGVYTDAES AVIVGTSAIV NDHDQFDLNT VILEKRIKFK RLSLEEAELN RQESVTIEFA DEERRTLMHK LESDRLEATH KVNKAAADAE AALSVAVLAA KEARTYDDKL AFDRACKEKE LRLRELEVER MPGKTERYIH TGIQGGAQLA GALAVGSMLR TRGVSNITPS NASGSPTGIG RVRSASQPVP TSLSGGSVLG ANNNNSVGSV SSGSRVESLG YNSAIRNHNT FWSKLRIGSE WRQNSISRMQ ARPLAGGGIP PSAPA

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