Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200239"

Accession numberr200239 [export]
Locus namecoat protein
Recode1 namepol_r_vir_bsbv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBeet soil-borne virus [details]
AcronymBSBV

Sequence

GenBank IDsU64512.1
SequenceRNA of 3454 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 875)
Descriptionproduction of fusion protein and set the ratio between two protein products
GGTAATTTTA CTTCTTCGCC GTTTATTTAA CACAGAAGAA GAAAAAATTT CCAATTTTTT GTTGCATAGA TAAAACATAC GGACAGGTAT CGGTGTTTTT GAAGTGTAAC TTAAAATCGG TTTTTATAGT ATTATTGGTG TACAGGCAGG TCCGAGCACT AATATTTACC ATATAAACTG TATTGCGTTG ACGGAGGCGT AAGAAAAACT ATACTTTCGT TTGATTCGCT CGATTTGGCG AGTAAAATAT AAATCATATC CGGTAATAAT TGATCCATTT TCCAGTCTAC GTACCTCTAT TGAGGAGCGT GCTATTGGAG GTGTAACTCG TAGTGATCAA GCGCCGAGAC GTGTTGCAAT TCCCATTACG TCATCTGTTA AGATGGTTGA TCCGCGGTAT GAAGGGTGGA ACCAACGTGA GGCTATAAGA GCCAAGAAGC GAAGGTTTGT ATCTTACGAT ACTTTTATGG ATTTAATCGT TAATTGGCGA GAGGTGCGGG TCGGTATTAT AGAGCACTCC GCTACTATAC TGTCGCAGGT TAGTAGGTTA GGGGAAGCAA ATTTTTACGG ACGTACTAAG CGCTTCGGAA GAGTTGACAC TAACGGTGAC GTTTTTTATG TTGATTTGAG TGAGGCCAGG ATAAGAAAAA TTTTAGATAA CATAATTATT GCTTTACAGA CTACTTCCGG TGAAGGACGC GCTAAACGAT TAGGAAAGGA GGCGAGCACG ACAGCAGGCG CGGAAGATAG CGCTCTGAAT GTGGCACATC AACTCGCCGA GCTAGCCGAG CTTATGACCT CCGATCAGTT TATTGAAGAC GCTTGCTTCA CGAGAGAAAA GTTTGAGCAT GAAGTTGGTT TGCGCTGGGT TGAATAGCAA TCAACTGCTC CGCCGGTTAA AGTGGACGTA CGTGCTGAAA TTGATTATAT TAACAATCGA ATGAAAGCAG CGGCGCGTTT AGGTCTACTA CCGGGGCAGG AGCGACACGG TGACGCGAAA CAAACTATAA ATTATGATGA TCTGGATTTT GCTTTGAATA GGGTTGCTGG TAATTTGTTA CCGCAGACTT TGGCTTTGGA GCGGTGCGTT GAGTCCGTTC CTGAAACTTT TAAGGATTCA GAGGACCGAA TTGACATAAA AGGCGGTAAC CCCGTCGGTG AAACGGTTGC GAAATCTCTG ATTGATTCTC ATGACGTTAA GGTCAAAAAG GATATAGGAG TTGACGGGGA TGGTTTAGCC TGGGTTTTGG CGGCTATTTT CGCTTTTCTT TCTATGTTGT TTTTCTCCTT GATGTGTTTT GGGAGTAGGA GGTTTCTGCG TCTGGCGATT CGACGTGAGG GTAAACCTGG GGGAGGTACG ATGATGTTTT TATCAAGAAT TTTTACAAAC ATTAGATATC GTCTGAGAGA TCGCGCTGTG AGGCTTGTCT CGCGGATGCG GTATTCTAAG CGCTCGAGGT ATAGTCGTAG CGATATGCGA CGTTATCTTA ATGATTATAA ATTCAGTTAC ATACCTTGGG TTGCCGATGA TTTTATGAGT AGCGACGATA AGAAGGTTGT GGCAGATCAG AATGCTTTTG TGGAAGCTGT TAAGCTTGTG GACGAAGGTG ACACTGATTT GGTATTAGAT GCAGTAAAAC GTGTTAAGGA AATAATCCAA GACTATTTGA GTTTTACACC CGACTTTCTT GAAATCATTG AGATGAAAGC GGCCTTTGTG GTGTCGAGGA AGGTTAGCAT TATTAACGTT CCGGAAGAGC GCGACATACT TAATCTCCAG GATAAAGCTT TTGATCCTAT TTCATGCGGC ATGCCTGATG TACAACAATG CAGTATGGAG GAGGTGATAA AGTTTGATCT ACAGGAGGTA AATTGTGGCG CCACTGATGA TCAAACGTCG TTAAAATCAT ATGTCGATCT ACTAAGAGGA TTGCAGTATA TGTTTTCACT TGTAGGTACG GTGAAGTTTA TAGCTGTGTA TATGGCTTAT TCTGGGAAAC AATACAAGTG TGTGGCCGAA GCTTACGCTA GCGATTTAGA AATGAGAAAA TCGTCCGTAG ATTCCGCCAC GAACGGTACT GTTGAGAAAG AAAAATCTTC TTATGTAGAT GAGATATGTT TAGCGCTACG CATTTTATTT GCGATGCCAG CTTTCATTTC TCTGATTAAA TCAGGTGGTG TTGTTTATCG CTATTTTACC CACGGAGGAG GCCCGGCAGC GCGTAGACGC TTAAGGGAAT CTCTTAATGA GTTGGATAAT TTAGAGTTTC AAAACCGTTT GAATCGTCTT CGCGAAGGCG CGGAGGATTT GGGAGAGCGT TCAGAGTCAT CGTCTACCAT AGAAGCTTTT GAAAGGCGTT TAGAGATGTT GAGGGAAGGA GATGATACTG GGAATGAAGG CAACGTTGCT GTGGATGAAA TTCGTAGCGA CACCGCCCCT GGTACTAACA CCTTGCCGAA CGCATCTTTT AATGTCGGTT CAGCTCCTAT TGGTGGTTTA GCTGTTATAC CTTGCATTGG TTTTCCGGAC AGTGCGTCGG AGCAACGTTT CGCTCGGACT CAAGGCAAAC TTTTGAGGAG TGTAAGGAAT GATAACGATT TTAAAAGTCG TAGTATTCCT GAACAGCAGA TCGAGACGGT GTTTCGACGG GATGCTGCGG ACACGTTATC TAACGGCTCC AGTTTTTCTT CCGTAGTTTT AGACTCGGAT GAAACATTTA GCATGGAAAA ATTAGAAGTT CTAAATAAGA ATTCGTATAG TGAAGTGCCT GGTGAAATGT TCACCATTAT GAAGGGTGAG AATGTGTCTC ACGCTACAGT TAAGCTTGGG AACGAAGATG TAGTTGTGGT GAATGCTGAT ACAGATTCTC CTACAGTTAT AGCTGCGAAT TCGTTATCCA AACTTCATAA AGATAAAGGC ATCGAGTTCG GAACTTTTAA CAAAGAGAAG ATATTACAAC TTTCCAGTGC TAACATTGAG AGTTCGGATA AAACAGTGTC TTCATCAAAA ACCAATAACA CAGTACGTGA CTTTACTAAA GTTTTGAAGG TTATTGGAAT GGCTGGTGGC AGAAAATCTT CCAAACCGGG GGCAGCGAAA GCTGCTTCTT CTTCGTCTAG CGTTGAAGTA GCTACGTCGA CGGAAGCTAT GAAAACTCCC ATGAGACAAT TGATTTAAAT TGTTCTTGGG GTTTATGATT AATTATTATT ATTAATTTTA AACAAGAAAT GATTATTTGG CGTGATCAAC CAACGTGGGT TATACGATAA TAACCGGTGC TTTTATGTTC ACCGAAATCG AACATACGTT TTATAGACCT GCAGTCGCTA TTAAGATAAT TAACAAAAAC TTAATATTTG ACTTATGTAG GTGAGAGTAG TTTCTCTCGG TCATCATCAC ACGATGATCC TGTGGGGTGC AAATCCCCCC CTTAACTTGA GGGAAATCAA GCCC

Products

ProductCP
Descriptioncoat protein, virion assembly domain
MVDPRYEGWN QREAIRAKKR RFVSYDTFMD LIVNWREVRV GIIEHSATIL SQVSRLGEAN FYGRTKRFGR VDTNGDVFYV DLSEARIRKI LDNIIIALQT TSGEGRAKRL GKEASTTAGA EDSALNVAHQ LAELAELMTS DQFIEDACFT REKFEHEVGL RWVE
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications875..877,aa:OTHER
MVDPRYEGWN QREAIRAKKR RFVSYDTFMD LIVNWREVRV GIIEHSATIL SQVSRLGEAN FYGRTKRFGR VDTNGDVFYV DLSEARIRKI LDNIIIALQT TSGEGRAKRL GKEASTTAGA EDSALNVAHQ LAELAELMTS DQFIEDACFT REKFEHEVGL RWVEQQSTAP PVKVDVRAEI DYINNRMKAA ARLGLLPGQE RHGDAKQTIN YDDLDFALNR VAGNLLPQTL ALERCVESVP ETFKDSEDRI DIKGGNPVGE TVAKSLIDSH DVKVKKDIGV DGDGLAWVLA AIFAFLSMLF FSLMCFGSRR FLRLAIRREG KPGGGTMMFL SRIFTNIRYR LRDRAVRLVS RMRYSKRSRY SRSDMRRYLN DYKFSYIPWV ADDFMSSDDK KVVADQNAFV EAVKLVDEGD TDLVLDAVKR VKEIIQDYLS FTPDFLEIIE MKAAFVVSRK VSIINVPEER DILNLQDKAF DPISCGMPDV QQCSMEEVIK FDLQEVNCGA TDDQTSLKSY VDLLRGLQYM FSLVGTVKFI AVYMAYSGKQ YKCVAEAYAS DLEMRKSSVD SATNGTVEKE KSSYVDEICL ALRILFAMPA FISLIKSGGV VYRYFTHGGG PAARRRLRES LNELDNLEFQ NRLNRLREGA EDLGERSESS STIEAFERRL EMLREGDDTG NEGNVAVDEI RSDTAPGTNT LPNASFNVGS APIGGLAVIP CIGFPDSASE QRFARTQGKL LRSVRNDNDF KSRSIPEQQI ETVFRRDAAD TLSNGSSFSS VVLDSDETFS MEKLEVLNKN SYSEVPGEMF TIMKGENVSH ATVKLGNEDV VVVNADTDSP TVIAANSLSK LHKDKGIEFG TFNKEKILQL SSANIESSDK TVSSSKTNNT VRDFTKVLKV IGMAGGRKSS KPGAAKAASS SSSVEVATST EAMKTPMRQL

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