Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200240"

Accession numberr200240 [export]
Locus nameBeta d read-through
Recode1 namepol_r_vir_bsmv1
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismBarley stripe mosaic virus [details]
AcronymBSMV

Sequence

GenBank IDsU35770.1
SequencemRNA of 929 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 394)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAAGACCA CAGTTGGTTC AAGGCCAAAT AAGTATTGGC CAATTGTCGC CGGAATCGGT GTCGTTGGAT TGTTTGCGTA TTTGATCTTT TCAAATCAAA AACATTCTAC GGAATCCGGC GATAATATTC ACAAATTCGC CAACGGAGGT AGTTACAGGG ACGGGTCAAA GAGTATAAGT TATAATCGTA ATCATCCTTT TGCCTATGGC AATGCCTCAT CCCCTGGAAT GTTGTTGCCC GCAATGCTTA CCATCATCGG AATCATTTCC TATTTATGGC GAACAAGAGA TTCCGTGCTC GGAGACTCAG GCGGAAACAA TTCCTGCGGA GAAGACTGTC AGGGCGAATG TCTTAACGGA CATTCTCGAC GATCATTACT ATGCGATATT GGCTAGTCTT TTTATCATTG CTCTATGGTT ATTGTATATA TATCTAAGCA GTATACCTAC GGAGACTGGT CCCTACTTCT ATCAAGATCT GAACTCTGTG AAGATCTATG GAATAGGGGC TACGAATCCA GAAGTTATTG CGGCCATCCA CCATTGGCAG AAGTACCCTT TTGGGGAATC TCCGATGTGG GGAGGTTTAG TCAGTGTTTT GAGCGTTCTT CTTAAACCGC TGACGTTAGT TTTTGCGTTA AGCTTTTTTC TCTTACTTTC TTCAAAAAGG TAAAAAAAAA AAAAAAAAAA ATGTTTGATC AGATCATTCA AATCTGATGG TGCCCATCAA CCATATGATG GGAGTGTTTG CAAGTCCACT ATAATCGAAC TTGAAAACGA TGCCTGAATT GGAAACCATG AATCTTAACG GATTCTGGAG AGAAAATTTA GGAATTGGTA TGTAAGCTAC AACTTCCGGT AGCTGCGTCA CACTTTAAGA GTGTGCATAC TGAGCCGAAG CTCAGCTTCG GTCCCCCAAG GGAAGACCA

Products

Productbeta-b-ORF2
DescriptionBeta d readthrough
Modifications394..396,aa:OTHER
MKTTVGSRPN KYWPIVAGIG VVGLFAYLIF SNQKHSTESG DNIHKFANGG SYRDGSKSIS YNRNHPFAYG NASSPGMLLP AMLTIIGIIS YLWRTRDSVL GDSGGNNSCG EDCQGECLNG HSRRSLLCDI GQSFYHCSMV IVYISKQYTY GDWSLLLSRS ELCEDLWNRG YESRSYCGHP PLAEVPFWGI SDVGRFSQCF ERS
Productbeta-b
Descriptionbeta-b protein, putative movement protein
MKTTVGSRPN KYWPIVAGIG VVGLFAYLIF SNQKHSTESG DNIHKFANGG SYRDGSKSIS YNRNHPFAYG NASSPGMLLP AMLTIIGIIS YLWRTRDSVL GDSGGNNSCG EDCQGECLNG HSRRSLLCDI G

Publications