Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200241"

Accession numberr200241 [export]
Locus nameBeta d read-through
Recode1 namepol_r_vir_bsmv2
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley stripe mosaic virus [details]
AcronymBSMV

Sequence

GenBank IDsX03854.1
SequenceRNA of 931 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 394)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAAGACCA CAGTTGGTTC AAGGCCAAAT AAGTATTGGC CAATTGTCGC CGGAATCGGT GTCGTTGGAT TGTTTGCGTA TTTGATCTTT TCAAATCAAA AACATTCTAC GGAATCCGGT GATAATATTC ACAAATTCGC CAACGGAGGT AGTTACAGAG ACGGGTCAAA GAGTATAAGT TATAATCGTA ATCATCCTTT TGCCTATGGC AATGCCTCAT CCCCTGGAAT GTTGTTGCCC GCAATGCTTA CCATCATCGG AATCATTTCC TATTTATGGC GAACAAGAGA TTCCGTGCTC GGAGACTCAG GCGGAAACAA CTCCTGTGGA GAAGACTGTC AGGGCGAATG TCTTAACGGA CATTCTCGAC GATCATTACT ATGCGATATT GGCTAGTCTT TTTATCATTG CTCTATGGCT ATTGTATATA TATCTAAGCA GTATACCTAC GGAGACTGGT CCCTACTTCT ATCAAGATCT GAACTCTGTG AAGATCTATG GAATAGGGGC TACGAACCCA GAAGTTATTG CGGCCATCCA CCATTGGCAG AAGTACCCTT TTGGGGAATC TCCGATGTGG GGAGGTTTAA TCAGTGTTTT GAGTATTCTT CTTAAACCGC TGACATTAGT TTTTGCGTTA AGCTTTTTTC TCTTACTTTC TTCAAAAAGG TAAAAAAAAA AAAAAAAAAA AAATGTTTGA TCAGATCATT CAAATCTGAT GGTGCCCATC AACCATATGA TGGGAGTGTT TGCAAGTCCA CTATAATCGA ACTTGAAAAC AATGCCTGAA TTGGAAACCA TGAATCTTAA CGGATTCTGG AGAGAAAATT TAGGAATTGG TATGTAAGCT ACAACTTCCG GTAGCTGCGT CACACTTTAA GAGTGTGCAT ACTGAGCCGA AGCTCAGCTT CGGTCCCCCA AGGGAAGACC A

Products

Productbeta-b
Descriptionbeta-b protein, putative movement protein
MKTTVGSRPN KYWPIVAGIG VVGLFAYLIF SNQKHSTESG DNIHKFANGG SYRDGSKSIS YNRNHPFAYG NASSPGMLLP AMLTIIGIIS YLWRTRDSVL GDSGGNNSCG EDCQGECLNG HSRRSLLCDI G
Productbeta-b-ORF2
DescriptionBeta-b readthrough
Modifications394..396,aa:OTHER
MKTTVGSRPN KYWPIVAGIG VVGLFAYLIF SNQKHSTESG DNIHKFANGG SYRDGSKSIS YNRNHPFAYG NASSPGMLLP AMLTIIGIIS YLWRTRDSVL GDSGGNNSCG EDCQGECLNG HSRRSLLCDI GQSFYHCSMA IVYISKQYTY GDWSLLLSRS ELCEDLWNRG YEPRSYCGHP PLAEVPFWGI SDVGRFNQCF EYS

Publications