Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200242"

Accession numberr200242 [export]
Locus namecoat protein
Recode1 namepol_r_vir_bvq1
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBeet virus Q [details]
AcronymBVQ

Sequence

GenBank IDsAJ223597.1
SequenceRNA of 2913 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 823)
Descriptionproduction of fusion protein and set the ratio between two protein products
GTAAAATTAT TCTCAGCCGT TGTTTAAACA ATTGAGTGAT TTTATCAGTT TTTGCAACTT TGCGAGTCCA TCACAGGAGG GTGGCTCAGC ATCATACTTC GGCAATAATC CGCGGGTGAT GTATTGTTGT TAAAAACAGG ATCGGATTTT TCAGTTTTGC GAGAACAGTA CTAAACTGAC TTTGTGTGTG TTTGTCGTGT TTTGTTTTTG TGTGGAAAGA TTCCAGAGAT CAGCGTTGAC ACCTCGCTAG ACGAAAGTCG TCGCCAGACC TCAAGTGTTT TTCCTCCGCG TATTGTAATT TCTTTACCGT CTGTTGTGTC TAGAAGTATG GTTGATCCAA GATATGAGCA TTGGACCGCG GAACATGCCA AAGCTGCGGC AAAAAATAAA TTTGGATCGT ATGAAACGTT GTTATCGCTG GTTAAAAACT GGCGTGAAGT GCGACTTAGT GTAGTTGAGC ATTCCGCGAC TATATTGACG CAAATCAATG AGTTTGGGAA ACAAGGCTTC TACAGTAGGA CCGTGCGTTT CGGTGGTCCC ATGCCGGCTG GTGACATGTT ATTTGTTAGC ATGAGTGAAC ACCTGCGGCG CATAATGAGT AACATTATTA TTGCATTGCA AAGTGTGCGA GGTGAAGGGA GGTCGAAAAG ACTTGGCATT AAAGATGGCG AATCCAGCAC GGGGGGAGAA GATAGCGCTC TTAATGTGGC ACATCAACTT TCGGAGTTAG CTGATTTGCT GGAGGATGAT GAATTCCTGA AATCGCATGT ATTTACGCAG GACAAATTCG AGCTAACGCT TGGATTGAAG TGGACCGGCT CATAGCAATC AATTGTCCTG GGATGGGGTG AGAGCGTGCA TGATGCTATC AATGCGATTG ATAATCGTAT TATTGCAGCT GCACGGTTGC TCATGCTACC GGGACAAGAT AGTCATAATC CCTCTGTGCA AGGGATAGAT ATGGATGCAA TTGAAACTTC GACTATGAAA GCGAGTGCGA ATTTACTGCC TCAGACTCTT GTTGTGGAAA CTACGTCAAC ACAGGCGGAG CGGGAAGCCG TGCCGTGTGT ACTTGATAGT GATGAACAAG AGCAGCTTAC GGTAGTTCCG TGTAAGGCTA CTGTGGAAGT AGACGGACAC GGGATTGCTT GGGTGATAGC TAGTATATTC GCACTTCTTT CTGTGTGCAT CGTTAGTTTT TTCATTTTTA GTAGTAACAA ATTTGCAGCG TTTGCGGCAC GTCGGCACGG GCGACCGGGC GGAGGTACCG CGAGTATTCT GGCGCGTATG TTTAGTCGGA TCCGTTATAG ATTGAGGGCT CGTGGGGCTC TTAATGTGAC GCGTTTAAAG ACTCGTAATG AGTTTTTGCC GAACCGTCGG AACTTTAGAA CGTACTTGGT AAATTACGAC TTTTCATATC GTTTATGGCA GTCAAGGCGT GGACTTACCG ACGCTGAGAT GCAGGTAGTC GCGGACCAGA ACGCTTTTGT TGGTGCTGTT AAGGCAGTGG ACGAAGGCGA TGAAACGTTA GCGGCTGCTG CCGTTGTTCG ACTGAGGCAG ATCTTTGATC AGTACTTGGA CTATGAACCG GCATATTTTG GTAAAATTTT GAACAAGTCA GTTTATCTCG CTTCGCTTTC TGCAAGTTCC GTAGCGAATA AAGACACCGC AGATTTGTTA GGCCTGGGTA AGAGTCTTCG AACCAGAGGC GTGTGGCTTA CCCAATGTAC AAACTTGCAG TTTACAAGAT ATTGTAGATT GCGATTTGTC GAAAGTGTTC TATCCCGAAA ATACTGACAT GAAAGCCGCG AAAGCATACG TTGATATGCT TCGTGACTTT CAGTTAATGT TTAGTGTGGC GGGTACTGTT CATTTCGTAG CCATTTACGC TTCTTACTCT GGGGCTCAAT ACCCGTGTGT GCAAGAAGCT TATGCTAAGG ACAAGGAGTT ACGTAAGGAG CAACTAGATA CGAAACAAAC GGAAAAATCC TCGACGACCG CCGATGTAGC GTCTTACGCT TTGGCGGCCT CTTCTTCCAT TTGACTTTGT GAAGGAGTAC GAGATAATGT ATCTATCGAT GGTGACTTAA GTACTCGTCG TTCTCCGGAT GATGTGTTAA CTGATAGTGC GCGAGCAGCT ATGTGCTCGA GAGCTAATTT AGCTTTTTCT GGGTTGCCGG CCTTAATTGC CACTAGCCCA GCATTAGTTA TTACAGCCAA TATAGATAAA GACCTTTCAT CTCACGGAAG GAACGAAATT GTGCCAAATG ATTATTTATC AGTAGCGAGA GCAGAGGGGC AGCCGCTTAT AGCCATGAGG GCTGGTGGCG AGGAAATTAC CATAATTAAT GCCGACTCGG ACTCTCCCAC ACTGATTCGC ACGGAAACAC TTTCGAAGAG ACCTTCGTCT GTGGGGGTGG AGTATGGATC TTTTTCTCGT GAGCGTATAA TATCGCTGTC AAAAGAGTTA ACAGTTGAAG GTGAACCATC GCCTATTTCG CATAAAGATA ACACGCGCAC GGTTGCTAAT CTGGCCATGT CTGCTGTAGC TATTGCTGCT AGTGTAGACG CGGCGCGAAG GGTAAGGCAA AACAAACTAC TAAATTGCAA AATACTAACC TGCAATTCGC TTAGTGTGTA AATGTTATGC TTGTTGTGGG ATGTACAATA ACATCTAGTG CTTAGAAGTT CACTTAAATC AAACTTCCGA CCAACGTGGT GCATACGTTA ATGCATAGTG TTTTTCGTTC CACTTAAATC GAAACGATTC TTTCTGATCT CTAGACGCTG TTAGGTTAAT AATAAAAACC CTAATATTTG TCGTTACGGA GATGCGACGA GGTGTCGCCG TTCATAAGAC ACATGGACGC TGTGGGGTGC AAATCCCCCC CTAACTTGAG GGAAATCAAG CCC

Products

ProductCP
Descriptioncoat protein, virion assembly domain
MVDPRYEHWT AEHAKAAAKN KFGSYETLLS LVKNWREVRL SVVEHSATIL TQINEFGKQG FYSRTVRFGG PMPAGDMLFV SMSEHLRRIM SNIIIALQSV RGEGRSKRLG IKDGESSTGG EDSALNVAHQ LSELADLLED DEFLKSHVFT QDKFELTLGL KWTGS
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications823..825,aa:OTHER
MVDPRYEHWT AEHAKAAAKN KFGSYETLLS LVKNWREVRL SVVEHSATIL TQINEFGKQG FYSRTVRFGG PMPAGDMLFV SMSEHLRRIM SNIIIALQSV RGEGRSKRLG IKDGESSTGG EDSALNVAHQ LSELADLLED DEFLKSHVFT QDKFELTLGL KWTGSQQSIV LGWGESVHDA INAIDNRIIA AARLLMLPGQ DSHNPSVQGI DMDAIETSTM KASANLLPQT LVVETTSTQA EREAVPCVLD SDEQEQLTVV PCKATVEVDG HGIAWVIASI FALLSVCIVS FFIFSSNKFA AFAARRHGRP GGGTASILAR MFSRIRYRLR ARGALNVTRL KTRNEFLPNR RNFRTYLVNY DFSYRLWQSR RGLTDAEMQV VADQNAFVGA VKAVDEGDET LAAAAVVRLR QIFDQYLDYE PAYFGKILNK SVYLASLSAS SVANKDTADL LGLGKSLRTR GVWLTQCTNL QFTRYCRLRF VESVLSRK

Publications