Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200243"

Accession numberr200243 [export]
Locus namecoat protein readthrough
Recode1 namepol_r_vir_bwyv
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismBeet western yellows virus [details]
AcronymBWYV

Sequence

GenBank IDsX13063.1
SequenceRNA of 2013 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 607)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATACGG TCGTGGGTAG GAGAATTATC AATGGAAGAA GACGACCACG CAGGCAAACA CGACGCGCTC AGCGCCCTCA GCCAGTGGTT GTGGTCCAAA CCTCTCGGGC AACACAACGC CGACCTAGAC GACGACGAAG AGGTAACAAC CGGACAGGAA GAACTGTTCC TACCAGAGGA GCAGGTTCGA GCGAGACATT TGTTTTCTCA AAAGACAATC TCGCGGGAAG TTCCAGCGGA GCAATCACGT TCGGGCCGAG TCTATCAGAC TGCCCGGCAT TCTCTAATGG AATGCTCAAG GCCTACCATG AGTATAAAAT CTCAATGGTC ATTTTGGAGT TCGTCTCCGA AGCCTCTTCC CAAAATTCCG GTTCCATCGC TTACGAGCTG GACCCACACT GTAAACTCAA CTCCCTTTCC TCAACTATCA ACAAGTTCGG GATCACAAAG CCCGGGAAAA GGGCGTTTAC AGCGTCTTAC ATCAACGGAA CGGAATGGCA CGACGTTGCC GAGGACCAAT TCAGGATCCT CTACAAAGGC AATGGTTCTT CATCGATAGC TGGTTCTTTC AGAATCACCA TTAAGTGTCA ATTCCACAAC CCCAAATAGG TAGACGAGGA ACCCGGCCCT AGCCCAGGGC CTTCTCCCTC TCCACAACCC ACACCCCAAA AGAAATATCG TTTTATCGTC TATACTGGAG TCCCCGTGAC TCGTATAATG GCTCAATCTA CGGATGATGC CATCTCTTTG TATGATATGC CGTCCCAACG GTTTCGCTAC ATAGAGGACG AGAACATGAA CTGGACGAAC CTCGATTCTC GATGGTATTC CCAGAATTCT TTGAAAGCCA TCCCGATGAT AATAGTGCCA GTCCCTCAAG GTGAGTGGAC CGTGGAAATA TCGATGGAGG GGTATCAACC AACCTCAAGC ACCACAGATC CTAACAAGGA CAAACAAGAT GGTCTCATCG CCTACAACGA TGATCTTAGT GAAGGTTGGA ACGTGGGGAT TTACAATAAT GTGGAGATAA CCAACAACAA GGCCGATAAT ACTTTGAAGT ATGGCCACCC AGACATGGAA CTCAATGGCT GTCATTTCAA TCAAGGACAG TGTCTGGAAA GAGATGGAGA TTTGACTTGT CATATCAAGA CGACTGGTGA CAATGCCTCC TTCTTTGTTG TTGGACCCGC TGTCCAGAAG CAATCTAAAT ATAATTACGC CGTTTCGTAC GGAGCCTGGA CAGATCGGAT GATGGAGATA GGGATGATCG CCATAGCACT TGATGAACAA GGCTCATCCG GTTCCGTAAA GACAGAAAGA CCAAAGAGAG TTGGGCACTC CATGGCAGTC TCAACCTGGG AGACTATAAA ATTGCCGGAG AAGGGAAACT CCGAGGGATA CGAAACCAGT CAAAGACAAG ACTCTAAAAC TCCTCCCACA GCTAGTGGGG GTTCTGACAC GCTGGACGTC GAAGAAGGAG GCTTGCCCCT TCCTGTTGAA GAAGAGATCC CCGATTTTGT TGGGGATAAC CCCTGGTCTG ACTTATCGAC TAAGAATTCA CAGGAAGAAG AGGCTATGTC ATCAGAGAGT GGTCTTAGAC CCCAGTTGAA GCCTCCTGGT CTGCCAAAAC CTCAACCGAT CAGAACGATT CGAAACTTCG ATCCAACACC GGATTTGGTT GAAGCGTGGC GACCCGATGT GAACCCCGGA TATTCCAAAG CAGATGTGGC AGCCGCTACT ATCATCGCCG GGGGTTCCAT CAAAGACGGC CGTTCTATGA TTGATAAACG AAATAAAGCT GTGTTAGACG GTCGCAAGAG TTGGGGTTCC TCCTTGGCTT CCTCCCTCAC GGGTGGTACG CTCAAGGCCT CCGCCAAGTC GGAGAAGCTT GCCAAACTTA CCACGAGTGA AAGGGCAAGG TATGAACGGA TTAAGCGTCA GCAAGGCTCC ACAAGAGCCT CGGAATTCCT AGAATCACTT CTAGCTGGCG AAGACCCCGA CTCAAGGTTC TGA

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNTVVGRRII NGRRRPRRQT RRAQRPQPVV VVQTSRATQR RPRRRRRGNN RTGRTVPTRG AGSSETFVFS KDNLAGSSSG AITFGPSLSD CPAFSNGMLK AYHEYKISMV ILEFVSEASS QNSGSIAYEL DPHCKLNSLS STINKFGITK PGKRAFTASY INGTEWHDVA EDQFRILYKG NGSSSIAGSF RITIKCQFHN PK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications607..609,aa:OTHER
MNTVVGRRII NGRRRPRRQT RRAQRPQPVV VVQTSRATQR RPRRRRRGNN RTGRTVPTRG AGSSETFVFS KDNLAGSSSG AITFGPSLSD CPAFSNGMLK AYHEYKISMV ILEFVSEASS QNSGSIAYEL DPHCKLNSLS STINKFGITK PGKRAFTASY INGTEWHDVA EDQFRILYKG NGSSSIAGSF RITIKCQFHN PKQVDEEPGP SPGPSPSPQP TPQKKYRFIV YTGVPVTRIM AQSTDDAISL YDMPSQRFRY IEDENMNWTN LDSRWYSQNS LKAIPMIIVP VPQGEWTVEI SMEGYQPTSS TTDPNKDKQD GLIAYNDDLS EGWNVGIYNN VEITNNKADN TLKYGHPDME LNGCHFNQGQ CLERDGDLTC HIKTTGDNAS FFVVGPAVQK QSKYNYAVSY GAWTDRMMEI GMIAIALDEQ GSSGSVKTER PKRVGHSMAV STWETIKLPE KGNSEGYETS QRQDSKTPPT ASGGSDTLDV EEGGLPLPVE EEIPDFVGDN PWSDLSTKNS QEEEAMSSES GLRPQLKPPG LPKPQPIRTI RNFDPTPDLV EAWRPDVNPG YSKADVAAAT IIAGGSIKDG RSMIDKRNKA VLDGRKSWGS SLASSLTGGT LKASAKSEKL AKLTTSERAR YERIKRQQGS TRASEFLESL LAGEDPDSRF

Publications