Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200244"

Accession numberr200244 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_bydv4
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

GenBank IDsD85783.1
SequenceRNA of 1953 nucleotides [sequence]
OrganisationSequence (3)

Recoding event

Event typeReadthrough (position: 601)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCAG TAGGCCGTAG AGGACCTAGA CGCGTAAATC AAAATGGCAC AAGAAGGAGG CGCCGTAGAA CAGTTCGGCC AGTGGTTGTG GTCCAACCCA ATCGAGCAGG ACCCAGACGA CGAAATGGTC GACGCAAGGG AAGAGGAGGG GCAAATCCTG TATTTAGACC AACAGGCGGG ACTGAGGTAT TCGTATTCTC AGTCGACAAC CTTAAAGCCA ACTCTTCCGG GGCAATCAAA TTCGGCCCCA GTCTATCGCA ATGCCCAGCG CTTTCAGACG GAATACTTAA GTCCTACCAC CGTTACAAGA TCACAAGTAT CCGTGTTGAG TTTAAGTCAC ACGCGTCCGC AACCACGGCC GGCGCTATCT TTATTGAACT CGACACCGCG TGCAAACAAT CAGCCCTCGC TAGCTACATT AATTCCTTCA CAATCAGCAA GACCGCCTCA AAGGTCTTCA GAGCCGAAGC GATTAACGGG AAGGAATTCC AGGAATCAAC GATAGACCAG TTTTGGATGC TCTACAAGGC CAATGGAACT ACCACTGAGA CGGCAGGACA ATTCATTATC ACGATGAGTG TCAGTTTGAT GACGGCCAAA TAGGTAAACT CCTCAACACC GGAACCGAAA CCTGCACCAG AACCCACACC AACCCCACAG CCCACGCCAG CTCCACAGCC CGCACCCGAA CCGACTCCTG CACCAGTCCC CAAAAGATTC TTTGAGTATA TCGGCACTCC AACCGGTACA ATCTCAACAA GAGAGAACTC TGACAGTATT TCTGTCAGCA AGCTCGGTGG ACAGTCGATG CAGTACATAG AGAATGAGAA GTGTGAAACA AAGGTCATTG ACTCCTTCTG GAGCACTAAC AACAACGTGT CTGCACAGGC AGCCTTCGTT TACCCAGTGC CAGAAGGATC ATACAGTGTG AACATTTCGT GCGAAGGCTT TCAATCCGTT GACCACATAG GAGGCAACGA GGATGGCTAT TGGATTGGTT TAATTGCCTA CTCCAATTCG TCAGGAGACA ATTGGGGGGT AGGCAACTAC AAAGGGTGTA GTTTCAAGAA CTTCTTGGCA ACCAACACTT GGAGACCAGG CCATAAGGAT CTCAAGTTGA ATGATTGCCA GTTCACAGAT GGACAAATAG TTGAGAGGGA TGCCGTGATG TCTTTCCACG TGGAAGCAAC AGGTACTGAT GCCTGTTTCT ATCTCATGGC TCCCAAAACA ATGAAAACTG ACAAATACAA CTATGTTGTC TCATATGGAG GGTACACAAA CAAACGGATG GAGTTTGGTA CCATATCTGT GACATGTGAT GAATCCGATG TTGAGGCAGA GCGCATAACA AGGCACGCTG AAACACCCAT ACGTTCCAAG CACATTCTTG TGTCCGAACA GTATGAGCAA CCTTTACCCA CCATAATCGA TCAAGGCTTG TGTGATGTGC AAACTCCCGA GCAAGAACAA ACACTGGTGG ATGAAGAAGA CAAACAGACT GTTTCCACAG AACCTGATAT AGCACTCATG GAATATGAAG CTGCAACAGC CGAAATTCCG GATGCTGAAG AGGATGTTTT GCCCTCCAAG GAACAGCTGT CTTCTAAACC GGTGGACACG TCCGGCAACA GAATACCTAA GCCCAAGGAA CCTGAAGTAC TTGGAACATA CCAGGGACAG AATATTTACC CTGAAGACGT GCCACCAAGC GCGCGGCAAA AGCTACGCGA AGCCGCAAAT GCACCCTCCA CATTACTCTA CGGGAAAACT TCCAATAAGA GCAAGAATTT CTTGACTCGT TTTGTGGAGG CGAATAGGTC CCCTACAACT CCAGCTGCCC CAACAGTGTC AACTGCATCA AACATGACAA GGGAGCAGCT TGCGGAGTAC ACTAGAATTA GGAGATCCCT TGGACTCACA GCAGCGAAGG AATACAGGGC GCAATTTCAG TGA

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNSVGRRGPR RVNQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANPVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASATTA GAIFIELDTA CKQSALASYI NSFTISKTAS KVFRAEAING KEFQESTIDQ FWMLYKANGT TTETAGQFII TMSVSLMTAK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications601..603,aa:OTHER
MNSVGRRGPR RVNQNGTRRR RRRTVRPVVV VQPNRAGPRR RNGRRKGRGG ANPVFRPTGG TEVFVFSVDN LKANSSGAIK FGPSLSQCPA LSDGILKSYH RYKITSIRVE FKSHASATTA GAIFIELDTA CKQSALASYI NSFTISKTAS KVFRAEAING KEFQESTIDQ FWMLYKANGT TTETAGQFII TMSVSLMTAK QVNSSTPEPK PAPEPTPTPQ PTPAPQPAPE PTPAPVPKRF FEYIGTPTGT ISTRENSDSI SVSKLGGQSM QYIENEKCET KVIDSFWSTN NNVSAQAAFV YPVPEGSYSV NISCEGFQSV DHIGGNEDGY WIGLIAYSNS SGDNWGVGNY KGCSFKNFLA TNTWRPGHKD LKLNDCQFTD GQIVERDAVM SFHVEATGTD ACFYLMAPKT MKTDKYNYVV SYGGYTNKRM EFGTISVTCD ESDVEAERIT RHAETPIRSK HILVSEQYEQ PLPTIIDQGL CDVQTPEQEQ TLVDEEDKQT VSTEPDIALM EYEAATAEIP DAEEDVLPSK EQLSSKPVDT SGNRIPKPKE PEVLGTYQGQ NIYPEDVPPS ARQKLREAAN APSTLLYGKT SNKSKNFLTR FVEANRSPTT PAAPTVSTAS NMTREQLAEY TRIRRSLGLT AAKEYRAQFQ

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