Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200245"

Accession numberr200245 [export]
Locus namecoat protein readthrough
Recode1 namepol_r_vir_bydv5
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismCereal yellow dwarf virus - RPV [details]
AcronymCYDV-RPV

Sequence

VariantNY
GenBank IDsL25299.1,D10206.1
Sequencess-RNA of 1812 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 613)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAGTACGG TCGTCCTTAG ATCCAATGGC AATGGTTCGC GCAGACGCAG ACAGAGAGTC GCTCGGCGAA GGCCTGCTGC AAGAACGCAG CCAGTGGTTG TGGTCGCTTC CAACGGCCCA GCCAGGCGCG GAAGACGCCG ACGACCAGTT GGTCCTCGGC GAGGAAGAAC TCCAAGATCT GGAGGAGGAA GCCGTGGCGA GACATTCGTT TTCTCAAAGG ATTCACTCGC GGGCAACTCC TCTGGAAGTA TCACCTTCGG GCCGTCTCTA TCAGAGTATC CGGCATTCCA GAATGGAGTA CTCAAGGCCT ACCATGAATA TAAGATCACA AATTGTGTCT TACAGTTCGT CAGCGAGGCC TCTTCCACAG CAGCCGGCTC CATCTCTTAC GAGTTGGACC CCCATTGCAA AGCATCTTCA CTCGCATCAA CAATCAATAA GTTCACAATC ACCAAAACTG GTGCGCGGAG CTTCCCAGCG AAGATGATCA ACGGGTTAGA GTGGCACCCC TCAGATGAGG ATCAGTTCCG AATTCTTTAC AAAGGGAACG GTGCTTCTTC TGTGGCTGGG TCTTTTAAGA TCACTCTTAG AGTCCAGCTA CAAAACCCAA AATAGGTAGA CGCGGAACCC GGTCCCAGTC CAGGACCATC ACCCGACCCC CCCCCCCCAC CTTCACCGTC CCCAGAACCT GCTCCTGCTA AGGAGGAACG ATTTATCGTC TATTCAGGGG TGGCTCACAC AATCATCAGT GCCCAAAGCA CTGATGATTC TATCATAGTT AGAGATATCC CAGACCAACG GTTTAGATAC GTTGAGAACG AAAACTTCTA CTGGTTTCAG ATAGCTGCTC AATGGTACTC AAATACGAAC ACAAAAGCAG TTCCGATGTT TGTCTTTCCA GTCCCCATCG GGGAATGGTC AGTCGAAATA TCAACTGAGG GATATCAAGC TACGTCTAGT ACCACGGATC CTAACAAGGG CCGCATTGAC GGGCTCATAG CTTATGATAA CTCAAGTGAA GGGTGGAATA TCGGGGCTGG AAGTAACGTT ACCATCACGA ACAACAAAGC TGACAATAGT TGGAAATACG GTCATCCTGA TCTGGAAATC AACTCTTGTC ACTTCAACCA GAATCAAGTT TTGGAGAAAG ATGGTATTAT TTCTTTCCAT GTCAAGGCTA CAGAGAAGGA AGCTAATTTC TTCTTAGTCG CCCCTCCAGT CCAGAAAACC TCGAAGTATA ACTACGCTGT CTCATATGGA GCGTGGACGG ACAGAGACAT GGAATTCGGA TTGATTACAG TCACGTTAGA TGAGAAACGT GGCTCGGGTT CCCCCACTCG CAAAAGCTTA CGCGCTGGAC ACGCGGGAGT AACGACCACC ACTGATTTGG TGGCGTTACC GGAGATGGAA AACTCCGGTA TAGAAACATC TGAAACCCCG TCAGCTCCGG TCACCAGCTC AAAAGCACCG TTGCCAACTG TCTCGGATTC GGAGTCAGAA GACGATCCGT TATCAGCCGC ACCAGATGTA GGCTTTGGCG GAACTCGTCT TTTGATTGAT ACTGATATCA AAACAATACC CGATCCGGAC GTTGCTGATG CCTTCGTGAA CAGCGCTCAC GTGGGTGTGG ATCCATGGGC AGAAGTTCGA GCGTTTAAGA GAGCTCAGCG TCCTCCCCGT GGACCGTCAT CGGTTGCTAG CAGCAGCCTC TCTGGAGGTT CGCTGCGTGG AAGCCTCAGA CCGAAAACTG AGGATCCGAA AGATTCATCC AAATCTAAAT CTAGAAAATG GTCTCTCGGA AGTCTGCGAT GA

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MSTVVLRSNG NGSRRRRQRV ARRRPAARTQ PVVVVASNGP ARRGRRRRPV GPRRGRTPRS GGGSRGETFV FSKDSLAGNS SGSITFGPSL SEYPAFQNGV LKAYHEYKIT NCVLQFVSEA SSTAAGSISY ELDPHCKASS LASTINKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY KGNGASSVAG SFKITLRVQL QNPK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications613..615,aa:OTHER
MSTVVLRSNG NGSRRRRQRV ARRRPAARTQ PVVVVASNGP ARRGRRRRPV GPRRGRTPRS GGGSRGETFV FSKDSLAGNS SGSITFGPSL SEYPAFQNGV LKAYHEYKIT NCVLQFVSEA SSTAAGSISY ELDPHCKASS LASTINKFTI TKTGARSFPA KMINGLEWHP SDEDQFRILY KGNGASSVAG SFKITLRVQL QNPKQVDAEP GPSPGPSPDP PPPPSPSPEP APAKEERFIV YSGVAHTIIS AQSTDDSIIV RDIPDQRFRY VENENFYWFQ IAAQWYSNTN TKAVPMFVFP VPIGEWSVEI STEGYQATSS TTDPNKGRID GLIAYDNSSE GWNIGAGSNV TITNNKADNS WKYGHPDLEI NSCHFNQNQV LEKDGIISFH VKATEKEANF FLVAPPVQKT SKYNYAVSYG AWTDRDMEFG LITVTLDEKR GSGSPTRKSL RAGHAGVTTT TDLVALPEME NSGIETSETP SAPVTSSKAP LPTVSDSESE DDPLSAAPDV GFGGTRLLID TDIKTIPDPD VADAFVNSAH VGVDPWAEVR AFKRAQRPPR GPSSVASSSL SGGSLRGSLR PKTEDPKDSS KSKSRKWSLG SLR

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