Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200246"

Accession numberr200246 [export]
Locus namecoat protein readthrough
Recode1 namepol_r_vir_bydv7
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

GenBank IDsD11028.1
SequenceRNA of 1974 nucleotides [sequence]
OrganisationSequence (3)

Recoding event

Event typeReadthrough (position: 598)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCAG TAGGCCGTAG AAACAACCGC AGGAGGAATG GCCCAAGGAG AGCAAGGCGC GTTAGCGCAG TTCGGAGAAT GGTTGTGGTC CAACCCAATC GAGCCGGACC AAAACGACGA GCTCGTCGAC GCACAAGAGG AGGAGGGGCA AATCTTATAT CTGGACCAGC AGGCAGGACT GAGGTATTCG TATTCTCAGT CAACGACCTT AAGGCCAACT CCTCAGGGAC AATCAAGTTC GGTCCCGACC TTTCGCAATG CCCAGCGCTT TCAGGTGGAA TACTCAAGTC CTACCACCTT TACAAGATCA CAAACGTCAA GGTTGAGTTT AAGTCACACG CGTCCGCCTC TACAGTCGGC GCAATGTTTA TTGAACTCGA CACTTGGTGC TCACAATCAA CCTTGGGTAG CTACATTAAC TCATTCACCA TCTCAAAATC AGCAACCAAA ACCTTCACCG CCCAACAGAT TGACGGGAAG GAATTCAGGG AGAGTACGGT GAACCAATTT TACATGCTAT ACAAGGCGAA TGGTAGTACA TCTGATACCG CCGGGCAATT CATCATTACA ATACGCGTTG CCAACATGAC TCCCAAATAG GTAGACTCCT CAACACCAGA ACCTTCGCCA CAACCCCAGC CAGAGCCCAA ACCTGATCCG CAGCCAACAC CAGAGCCTCG ACAGAAACGG TTTTTCGAGT ACGTAGGAAC GCCCTATGTT GTCATACAAA CTAGGGAGAG TTCGGATAGC ATTGCCGTTA AGGCGATGAA TGATCAATCT TTTCAGTACA TCGAAAATGA AACTTCGGAG CAAAGAACCG TCAAGGCATG GTGGAACTCC AACAACAGTG TCCAAGCGCA AGCAGCATTT ATATTTCCTA TACCCGCTGG TGAGTACAGC GTGAATATCT CTTGCGAAGG TCTACAATCT GTGGACCACA TTGGAGGAAA CAGAGACGGA TATTGGATAG GCTTGATAGC CTACCAAAGC CAAAGTGGGG ACTACTGGGG CGTAGGTAAC TATGTCGGCT GTGATATAAC AAATCTTCTA GGAACAAACA CTTGGCGTCC AGGCCATGAA GATTTGGAAT TAAACAGCTG TAAATTCACA GATGGACAAA TAGTTGAAAG AGATGCTGTG ATATCTTTCC ATGTCAAAGC TAGGGGTGCT GATCCCAAGT TTTACCTCAT GGCACCTAAA ACCATGAAGG CTGACAAATA CAACTATGTT GTGTCGTATG GAGGGTACAC AGATAAAAGA ATGGAATTTG GAACCATATC TGTCACTGTG GATGAATCTG ATGTTGAGGC AGAACGCTAT AGCAGGCACA CGAGCACGGT CAGGAGAACA GAGAACCGAG ATTACGGGTG GATGAATGTG CTCCCACCCT ACAATCCTGA CCAAGTACCA GAGCAGGAAG ATGAACAACC AGTGGTTGAT AAGGAAATGG ATGCCGGATC CCCTATCGAC ACCGCATCGT TGACCTCTGA TACTGAGGCT GAGAAAGCCT TTGACTTGAA GGAAGAAGAA CTTACTAGGG CCATTCTTGA ATACGAGGCA GCCACTGTAT CAATACCTGA TGCTGCCCCG GATATCTTGC CCTCTAAATC TGAGATGAGC AGCAAACCAA TAGACCGAGA TGGGAGGTCT TTACCAAAAT CTCAGACAAA GGAAGTCCTT GGCACTTACC AAGGCCAGAA CATCACTTCT GATGATGTTC CTCCTGTCAT AGCTGAAAAA TTGCGTGAAG TAAACAGAGC ACCATCTACT CTGCTTTACG ACAGGCAGCC AAAACAACCT AAAAATCCTC TTACCCGTTT CGTATTATCT AATAAGACTA GCACGGCTTC CCCTGGCTCC CAGTCTTCCA CTGCTGGAAT GACGAGAGAA CAAGCATCTG AATACACCAG GATTAGGAAG TCTTTGGGCC TAACAGCAGC AAAACAATAC AAAGCAAGCC TCGATGACAC ATAG

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNSVGRRNNR RRNGPRRARR VSAVRRMVVV QPNRAGPKRR ARRRTRGGGA NLISGPAGRT EVFVFSVNDL KANSSGTIKF GPDLSQCPAL SGGILKSYHL YKITNVKVEF KSHASASTVG AMFIELDTWC SQSTLGSYIN SFTISKSATK TFTAQQIDGK EFRESTVNQF YMLYKANGST SDTAGQFIIT IRVANMTPK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications598..600,aa:OTHER
MNSVGRRNNR RRNGPRRARR VSAVRRMVVV QPNRAGPKRR ARRRTRGGGA NLISGPAGRT EVFVFSVNDL KANSSGTIKF GPDLSQCPAL SGGILKSYHL YKITNVKVEF KSHASASTVG AMFIELDTWC SQSTLGSYIN SFTISKSATK TFTAQQIDGK EFRESTVNQF YMLYKANGST SDTAGQFIIT IRVANMTPKQ VDSSTPEPSP QPQPEPKPDP QPTPEPRQKR FFEYVGTPYV VIQTRESSDS IAVKAMNDQS FQYIENETSE QRTVKAWWNS NNSVQAQAAF IFPIPAGEYS VNISCEGLQS VDHIGGNRDG YWIGLIAYQS QSGDYWGVGN YVGCDITNLL GTNTWRPGHE DLELNSCKFT DGQIVERDAV ISFHVKARGA DPKFYLMAPK TMKADKYNYV VSYGGYTDKR MEFGTISVTV DESDVEAERY SRHTSTVRRT ENRDYGWMNV LPPYNPDQVP EQEDEQPVVD KEMDAGSPID TASLTSDTEA EKAFDLKEEE LTRAILEYEA ATVSIPDAAP DILPSKSEMS SKPIDRDGRS LPKSQTKEVL GTYQGQNITS DDVPPVIAEK LREVNRAPST LLYDRQPKQP KNPLTRFVLS NKTSTASPGS QSSTAGMTRE QASEYTRIRK SLGLTAAKQY KASLDDT

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