Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200247"

Accession numberr200247 [export]
Locus namecoat protein read-through
Recode1 namepol_r_vir_bydvsgv2
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismBarley yellow dwarf virus [details]
AcronymBYDV

Sequence

VariantSGV
GenBank IDsU06865.1
SequenceRNA of 1929 nucleotides [sequence]
OrganisationSequence (2)

Recoding event

Event typeReadthrough (position: 589)
Descriptionproduction of fusion protein and set the ratio between two protein products
ATGAATTCTC AAGGCCCTAG GCGCAACGCA CGCAAAAATG TCAGAAGACG CAATCGAACA GTTCGGCCAG TGGTTGTGGT CCAAGCCCCC GGAACCGGGC GAAGACGAAG AAATGGTCGA CGTCCAGCAA GAAGACGGGC AAATCATTTA CCGAGACCAG CAGGCAGGTC TGAGGTATTC ACTTTTTCAG TCAACGACAT CAAAGGCAAC TCCAACGGGG TCATCAAATT CGGCCCCAGC CTTTCGCAAT GTCCTGCATT ATCAGACGGA ATACTTAAGT CCTACCACGA CTACGCGATC ACAAATGTCC AGATATTCTA TAGATCGCAC GCCAGCTCCG AAACTGAGGG CGCACTCTTT ATTGAACTCG ACAACTCGTG CACACAATCA GCCTTGGCTA GCTACATTAA CTCATTCACC ATCACAAGTT CCGGATCGAA GACCTTCACG GCGGGCTCTA TTAACGGGAC CACGATGAAG AACTATTTGT CTGACCAGTT TTACCTCTTA TACAAAGGCA ACAGTTCTAA GGCCACTGTT GCAGGTCAGT TTATTATCAC GATCCGCGTT AAAATGGCCA ACCCTAAATA GGTAGACCCC TCGCCGTCTC CCGCCCCCGC TCCCGCACCC ACACCAACAC CTCAACCCCA ACCCTTTCCC CAACCGCAGC CAGAACCAGC AAAACCTAGA TTCTATGCTA ACTACTCCGG TACACCGACT GTCAACATCA GTACCAGGGA GACATCAGAC AGTATAGCTG TCAAAAGGCT AGGTGCTCAA ACTCTTATGT ACAACTCCGA TGATGTCCAT GAAAACCGCC AGATCAAGTC TTGGTGGTAT TCCGACAACA ACGTTGAGTC TCAGGCTGCG TTTGTCTTCC CAGTTCCGGA AGGTGAATAC TCTATACAGA TCACTGCCGA AGGGCTACAG TCGGTAGACC ACATTGGTGG CAATTATGAT GGCTACTGGA TTGGCCTTAT TGCTTACGGC AATGACATAT CTGATAACTG GGGTATTGGG GTTTATGATA AGTGCTCCAT AACTGATCTA ATCAACACGG CCTCTTGGAG GCCAGGACAT AAAGATATGG AGCTAAACGG GTGTAAATTC TCAGATCAAG TAGTAGAACG TGATGCAATC ATATCATTCA AAATCCATGC TCAAAAAGGA GCATCGTTCT ACCTAGTCGC ACCAAGGACC AAGAAAGCAG ACAAATACAA CTATGTTGTA TCGTATGGTG GGTACACTGA GAAGCGAATG GAGTTTGGGA CCATCTCCGT GACCATAGAT GAAAGAAACG ACGAGGCAAG ATCACAGTGG CACACGCTAC AACCTTTCAA GCCTGGTCTG CTTGAAATAT CTCATAAGCG AGCCACTCCT TTATCTACCT TCGTGCCAGT TCCGGACACT AATTTTGAAA GAAATGAGGA CACCAATCCT CCCGTTAGTG TTTCATCCCC AGAACTTGAG GTTAACCTTA ATCTGGAGGA CATTTCGCAC GAGCTAACTG AAAGGGGAAG GGAGCCCACC CCTGACCCGC AGGACGATCT AGCCAAACGA CTGGAAGAGT ACGAAAAAGC AACCAGTGAG GTGCCTGATT TCGCATTGAC TCAGGATGAC GAGGAGATCC CATCGATCTC TTTGGCACCA CCTAAACCCC CTGGTTTGCC AAAATCACCA GAACCAGCCA GTACCTATAG GCCCGATCCT GTTACAATTC CCAACTACAC CAAAAGCAAA GCTAACAACC GATTACTCTC CCGGTTTTTG GAGGGAAACC GCTCAAATAA AGTTGCTGAC GGATCTACTG CCACCACATC AAGATTAACT CCAGAGCAAA ACCTGGAGTA TTACCGCATT CAGCGGTCTC TGGGCAAGAC CGCAGCAGCA AAGTACAAAC AAGAGTGTTT GAATGAACAA GCAATCTAG

Products

ProductCP
Descriptioncoat protein, aphid transmission, movement
MNSQGPRRNA RKNVRRRNRT VRPVVVVQAP GTGRRRRNGR RPARRRANHL PRPAGRSEVF TFSVNDIKGN SNGVIKFGPS LSQCPALSDG ILKSYHDYAI TNVQIFYRSH ASSETEGALF IELDNSCTQS ALASYINSFT ITSSGSKTFT AGSINGTTMK NYLSDQFYLL YKGNSSKATV AGQFIITIRV KMANPK
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications589..591,aa:OTHER
MNSQGPRRNA RKNVRRRNRT VRPVVVVQAP GTGRRRRNGR RPARRRANHL PRPAGRSEVF TFSVNDIKGN SNGVIKFGPS LSQCPALSDG ILKSYHDYAI TNVQIFYRSH ASSETEGALF IELDNSCTQS ALASYINSFT ITSSGSKTFT AGSINGTTMK NYLSDQFYLL YKGNSSKATV AGQFIITIRV KMANPKQVDP SPSPAPAPAP TPTPQPQPFP QPQPEPAKPR FYANYSGTPT VNISTRETSD SIAVKRLGAQ TLMYNSDDVH ENRQIKSWWY SDNNVESQAA FVFPVPEGEY SIQITAEGLQ SVDHIGGNYD GYWIGLIAYG NDISDNWGIG VYDKCSITDL INTASWRPGH KDMELNGCKF SDQVVERDAI ISFKIHAQKG ASFYLVAPRT KKADKYNYVV SYGGYTEKRM EFGTISVTID ERNDEARSQW HTLQPFKPGL LEISHKRATP LSTFVPVPDT NFERNEDTNP PVSVSSPELE VNLNLEDISH ELTERGREPT PDPQDDLAKR LEEYEKATSE VPDFALTQDD EEIPSISLAP PKPPGLPKSP EPASTYRPDP VTIPNYTKSK ANNRLLSRFL EGNRSNKVAD GSTATTSRLT PEQNLEYYRI QRSLGKTAAA KYKQECLNEQ AI

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