Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200252"

Accession numberr200252 [export]
Locus nameputative replication gene read-through
Recode1 namepol_r_vir_carmv3,pol_r_vir_carmv4
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismCarnation mottle virus [details]
AcronymCarMV

Sequence

GenBank IDsAF192772.1
SequenceRNA of 4003 nucleotides [sequence]
OrganisationSequence (1)

Recoding events

Event typeReadthrough (position: 805)
Descriptionproduction of fusion protein and set the ratio between two protein products
Event typeReadthrough (position: 2,359)
Descriptionproduction of fusion protein and set the ratio between two protein products
GGGTAAGCTG GCGGGCAAAC CTACACTCTA TCTTACTTAC ATTATATATC CTAACCATCT GCTTTCACTA TGGGATTACC CAGTCTACTA GTGGAAGGCG TTATTGGGTG CACTCTAGTT GGTGGTTTAG TGGCTGTGGG TAGCGCAGCG CTGGCCGTCA GGGCGACCAT CGGAGTAGTG GAATTCAATA GGGAGTGTGT GCGTGGGGCG AGGAGGATCG TATCTAGCGG TGGAAGGTGC TTAATAGTCC AATCCCCTTA TGGTAATCCT AACCAAGGAT TGATAAGAGG TGAGGATGAA GAAATTGATA ATGTGGAAGA GTCGACTCCG GAGGAGCTAA CTCAGTTGAT CGAGGTTAAG GCGGAAGTGG ATGGGAAGGA GGTGGTTGTC TCCAAGAAGC GTGTGGTGAA CAGGCACTTG AGACAACGAT TCGTTCGCTC CATTGCCATC GAAGCCAAAA ATCACTTTGG TGGTGACATC AGTCCCAGCA AGGCTAACTA CCTTTCTGTT TCCAAGTTTT TGACGGGGAA ATGCAAGGAG AGGCATGTTG TGCCCGCTCA CACTAGAGAT TGTGTGAGCG CTGCCATGGT ACTGGTGTTC ACCCCTGACG TCCACGAGAT CAGGATGATG GCAGGGTTGG CATCTGATGC AGCGTACGCG AGGAAAATCG CAATGGCAAG CATACTGAAC AGGAAAGGGT GGTGTTGGAG GCTAATGGTA AATCCATTGG ATAGGGCAAG ATGGTGGGAA ATGTGGTGCG TCGTAAACGG GTTTGACTCC AACAAACCCG TCACCTTTCC CAAATAGGGG GGCCTGTTCT ACCTCAATGG TGTGGAGACG AAAATTCGTC GTGGAGGCCA CCCATCAGTG ATTGAGGTAG ACGGGCAATG TCCTCCAAGA GAGAGAAAAC TCTACGTACA GAATGCCATA ACCACTGGTT ATGAATACAG GGTCCACAAC CATTCGTACG CAAACCTCAG ACGAGGGCTC CTTGAGAGAG TCTTCTATGT TGAGCGCAAC AAGGAGCTAG TCAGCTGTCC GCAACCTGAA CCCGGCAGCT TTAAAGAGAT GGGATACCTG CGACGCAGGT TCCATAGAGT GTGTGGCAAT CATACCCGGA TCTCTGCCAA TGATTTGGTA GATTGTTATC AGGGCAGGAA GCGCACAATT TATGAGAATG CAGCAGCGTC CCTACTTGAT AGAGCTATCG AGAGGAAGGA TGGCGATCTC AAGACCTTTA TAAAGGCGGA GAAATTCAAC GTAAATCTGA AAAGTGATCC TGCTCCTCGG GTCATACAGC CCAGGAGCCC TCGCTACAAT GTGGAGTTGG GCCGGTACTT AAAGAAGTAT GAACACCATG CTTACAAAGC CCTGGACAAG ATCTGGGGGG GGCCAACGGT CATGAAAGGA TACACTACAG AGGAGGTAGC ACAGCACATT TGGAGCGCAT GGAATCAATT CCAGACACCT GTAGCCATCG GATTTGACAT GTCAAGATTT GATCAGCACG TGTCTGTAGC CGCGCTCGAG TTCGAACATT CATGCTATTT GGCCTGTTTT GAAGGGGACG CTCACCTCGC CAATTTGCTT AAGATGCAAC TGGTGAATCA TGGCGTAGGT TTTGCGAGCA ATGGAATGTT GCGATACACC AAGGAAGGGT GCAGAATGAT CGGAGACATG AACACTGCCT TGGGCAACTG TTTGTTAGCG TGTCTTATCA CCAAACACTT AATGAAAATC AGAAGCAGAC TGATCAACAA TGGGGATGAC TGCGTGCTTA TTTGCGAAAG AACAGACATC GACTACGTCG TGAGCAATCT AACGACGGGA TGGAGTCGAT TTGGATTCAA TTGCATAGCA GAAGAACCAG TGTACGAAAT GGAAAAGATC AGATTCTGCC AGATGGCACC GGTGTTTGAT GGAGCAGGCT GGCTGATGGT CAGGGACCCA TTGGTGAGCA TGAGTAAAGA TTCTCACTCC TTGGTACACT GGAACAACGA AACAAACGCA AAACAATGGC TAAAATCAGT AGGAATGTGC GGACTGCGGA TTGCCGGGGG GGTTCCGATT GTGCAAGAGT TCTACCAAAA ATACGTTGAA ACAGCCGGAA ATGTGAAAGA GAACAAAAAT ATCACAGAGA AAAGTAGTTC TGGGTTCTTT ATGATGGCGG ATCGCGCTAA GCGGGGCTAT TCTGCAGTGT CTGAGATGTG CCGATTCAGT TTTTACCAGG CATTCGGTAT TACACCAGAC CAGCAGATCG CGTTGGAGGG GGAGATTAGA TCTCTCACCA TCGACACCAA TGTGGGGCCC CAGTGTGAAG CGGCAGATTC ACTATGGATA TTGAACCGGA AGTACCAGTA GTTGAGAAGC AAATGCTCGC TGGGAATAGA GGAAAACAAA AGACACGTAG ATCGGTGGCC AAGGATGCCA TCCGCAAACC TGCATCCGAT AGTACTAACG GGGGTAATTG GGTTAATGTT GCTGATAAGA TTGAGGTGCA CATTCACTTC AACTTTTAGT TTGCCCCCGT TGGTAACCTT AAATCAGATA ATAGCGTTGT CATTTTGTGG TCTTCTATTA AACAGCATCT CTCGGGCAGA AAGAGCTTGC TATTACAACT ACTCTGTTGA CAGTTCTAAA CAACAACACA TTTCGATAAG TACACCAAAT GGAAAATAAA GGAGAAAAGA TCGCGATGAA TCCCACTGTG CAAACATTGG CGCAGAAGGG GGATAAGTTA GCCGTGAAGT TGGTGACAAG AGGGTGGGCC TCTCTGAGTA CGAACCAGAA GAGGAGAGCT GAAATGCTTG CTGGATACAC TCCAGCGATC CTAGCCTTCA CACCCCGACG ACCACGGATG ACAAACTCTC CTCCAAGAAC CAGTAGGAAT TCACCAGGAC AAGCTGGAAA GTCCATGACG ATGAGTAAGA CCGAACTGCT ATGCACCGTC AAAGGTACCA CAGGTGTTAT CCCAAGCTTT GAAGACTGGG TCGTTTCCCC CCGAAACGTA GCCGTTTTCC CCCAACTCTC GCTGCTGGCG ACCAACTTCA ATAAGTACCG CATCACTGCG CTTACTGTGA AGTACTCACC AGCGTGTAGC TTCGAGACCA ATGGGAGGGT GGCTCTGGGA TTCAACGATG ACGCTTCGGA CACACCACCA ACCACCAAGG TTGGATTTTA CGATCTGGGC AAACATGTGG AAACTGCTGC ACAGACAGCT AAAGATCTAG TGATACCAGT AGACGGCAAA ACCCGGTTCA TCAGGGACTC GGCTAGTGAT GATGCCAAAC TAGTCGATTT TGGACGATTA GTCTTGTCAA CATACGGGTT TGACAAGGCA GATACTGTGG TGGGCGAGTT GTTTATACAG TACACGATTG TGCTGAGTGA CCCAACCAAG ACGGCCAAAA TTTCACAGGC AAGCAACGAT AAGGTGTCGG ATGGACCAAC GTATGTGGTC CCTTCGGTTA ACGGCAACGA GCTGCAACTA AGAGTGGTAG CCGCAGGGAA ATGGTGCATT ATAGTGCGGG GCACGGTTGA AGGTGGCTTC ACCAAACCCA CACTTATTGG ACCAGGAATC AGCGGTGATG TGGACTATGA AAGTGCCAGA CCTATCGCCA TTTGCGAGTT GGTGACACAA ATGGAGGGCC AGATGTTGAA AATCACCAAG ACCTCAGCAG AACAACCACT CAAAGTGGTT GTTTATAGGA TGTGAATGCA GAAGAAAAGT TTGATAGACA CACACGGCGG GACGTGTTGC TAGAGCTGCC ACTCTGCCCG AGATGGATCG ATATTAACCA TCTTTGGCAA CAGCGTGTGT GATCAACCAA ACCTAGTAAC TGCGTAGCAT CCGACTGTAA CCTGTTCTCT GCTGAATGCG AGGGTGGCCT CGTGATCCCA AACCATAAAA GAAACCAACT TGTTGGTGGA AGGGCTAGGA AGTAGGATCA ACCACTGTTT ATTAATTAGG GGTAAGAGTA TTCACTGTAC TCTTTCCCCG CCC

Products

Productgag
MGLPSLLVEG VIGCTLVGGL VAVGSAALAV RATIGVVEFN RECVRGARRI VSSGGRCLIV QSPYGNPNQG LIRGEDEEID NVEESTPEEL TQLIEVKAEV DGKEVVVSKK RVVNRHLRQR FVRSIAIEAK NHFGGDISPS KANYLSVSKF LTGKCKERHV VPAHTRDCVS AAMVLVFTPD VHEIRMMAGL ASDAAYARKI AMASILNRKG WCWRLMVNPL DRARWWEMWC VVNGFDSNKP VTFPK
Productgag-pro
DescriptionPutative protease
Modifications805..807,aa:OTHER
MGLPSLLVEG VIGCTLVGGL VAVGSAALAV RATIGVVEFN RECVRGARRI VSSGGRCLIV QSPYGNPNQG LIRGEDEEID NVEESTPEEL TQLIEVKAEV DGKEVVVSKK RVVNRHLRQR FVRSIAIEAK NHFGGDISPS KANYLSVSKF LTGKCKERHV VPAHTRDCVS AAMVLVFTPD VHEIRMMAGL ASDAAYARKI AMASILNRKG WCWRLMVNPL DRARWWEMWC VVNGFDSNKP VTFPKQGGLF YLNGVETKIR RGGHPSVIEV DGQCPPRERK LYVQNAITTG YEYRVHNHSY ANLRRGLLER VFYVERNKEL VSCPQPEPGS FKEMGYLRRR FHRVCGNHTR ISANDLVDCY QGRKRTIYEN AAASLLDRAI ERKDGDLKTF IKAEKFNVNL KSDPAPRVIQ PRSPRYNVEL GRYLKKYEHH AYKALDKIWG GPTVMKGYTT EEVAQHIWSA WNQFQTPVAI GFDMSRFDQH VSVAALEFEH SCYLACFEGD AHLANLLKMQ LVNHGVGFAS NGMLRYTKEG CRMIGDMNTA LGNCLLACLI TKHLMKIRSR LINNGDDCVL ICERTDIDYV VSNLTTGWSR FGFNCIAEEP VYEMEKIRFC QMAPVFDGAG WLMVRDPLVS MSKDSHSLVH WNNETNAKQW LKSVGMCGLR IAGGVPIVQE FYQKYVETAG NVKENKNITE KSSSGFFMMA DRAKRGYSAV SEMCRFSFYQ AFGITPDQQI ALEGEIRSLT IDTNVGPQCE AADSLWILNR KY
Productgag-pro-pol
DescriptionRNA-dependent RNA polymerase
Modifications805..807,aa:OTHER|2359..2361,aa:OTHER
MGLPSLLVEG VIGCTLVGGL VAVGSAALAV RATIGVVEFN RECVRGARRI VSSGGRCLIV QSPYGNPNQG LIRGEDEEID NVEESTPEEL TQLIEVKAEV DGKEVVVSKK RVVNRHLRQR FVRSIAIEAK NHFGGDISPS KANYLSVSKF LTGKCKERHV VPAHTRDCVS AAMVLVFTPD VHEIRMMAGL ASDAAYARKI AMASILNRKG WCWRLMVNPL DRARWWEMWC VVNGFDSNKP VTFPKQGGLF YLNGVETKIR RGGHPSVIEV DGQCPPRERK LYVQNAITTG YEYRVHNHSY ANLRRGLLER VFYVERNKEL VSCPQPEPGS FKEMGYLRRR FHRVCGNHTR ISANDLVDCY QGRKRTIYEN AAASLLDRAI ERKDGDLKTF IKAEKFNVNL KSDPAPRVIQ PRSPRYNVEL GRYLKKYEHH AYKALDKIWG GPTVMKGYTT EEVAQHIWSA WNQFQTPVAI GFDMSRFDQH VSVAALEFEH SCYLACFEGD AHLANLLKMQ LVNHGVGFAS NGMLRYTKEG CRMIGDMNTA LGNCLLACLI TKHLMKIRSR LINNGDDCVL ICERTDIDYV VSNLTTGWSR FGFNCIAEEP VYEMEKIRFC QMAPVFDGAG WLMVRDPLVS MSKDSHSLVH WNNETNAKQW LKSVGMCGLR IAGGVPIVQE FYQKYVETAG NVKENKNITE KSSSGFFMMA DRAKRGYSAV SEMCRFSFYQ AFGITPDQQI ALEGEIRSLT IDTNVGPQCE AADSLWILNR KYQQLRSKCS LGIEENKRHV DRWPRMPSAN LHPIVLTGVI GLMLLIRLRC TFTSTFSLPP LVTLNQIIAL SFCGLLLNSI SRAERACYYN YSVDSSKQQH ISISTPNG

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