Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200256"

Accession numberr200256 [export]
Locus namereplicase
Recode1 namepol_r_vir_chinese1
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismChinese wheat mosaic virus [details]

Sequence

GenBank IDsAJ012005.1
SequenceRNA of 7147 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 4,152)
Descriptionproduction of fusion protein and set the ratio between two protein products
GTATTTCTTT CTCTCTACGT CGTTAGACAG TGTAGAGTGT TTGGAATACT TGTTGCAATA CAAAGGCACG CTTCGGCGAT AAATCCTTTG TTTGTAACAA AATGCCGATC GATAGCAGTT CGATACTTGG TATTATTAGT GAAGAGGATG TCATTAGGGC CGCCATTAGT ACTAGTGCGA CAAAATTTGG TTCGCAGTTG CATAGTACTG TGTGCGATCA TGTTAAAGAG ACGTACTTGG ACGCTATGGA AAGACAAAAA ACAAAAAAGA AGATAGATGT GAGGCGCGAC TTGTCACAGG AACAGCTTCA ACTTCTAAAT GACCTTTATC CGGAGAGACA CATTGTGTCA AGCAACTGTG AAAGAGGTAC GCACAGCTTT GCAGCGGCTT CGAGGAAAAT CGAGACTGAT TTGTTGTTGA GTCGTATTCC TAAAAAATCG TGGGTCTACG ATATTGGGGG CAACTGGGCC ACGCACATCA AGCGCAATGA TGGGCGTAGG GTGCATTGTT GTTGCCCTAC TATTGACATA AGAGATTCTG CGAGGAAGAC TGTTAGTTGG GCGTCTATAG AAAAATATTT GGATGAGAAG GACGAGATAC CCACCGAAGT CGGTGAGCGT ATTAAGCGTG TGCAGGCTGA TGAAATTAAG ATTTATGAGA ATCTGAAGAA TAAAAGGGCT CAGCCTGAAG ATTTAGATGG TAAGTGGTAC TGTGGAAACA AGTTTGAGGA GTGTGTGTTC AGAGCAGAGA GGGCTTATGC GATGGCTATC CATAGCATTT ATGATATTGA TCTCATGGAT CTGGCCAATG CTTTAGAGGA AAAAAGAATA AAGATCATGA GTGGCACGTT CCTGTTTTCG GTTGACCTGT TACTTGGGAA AAAGAGCGGA TCACTACCGA CCATGGATGG TTTCTTTGAG GTAGAAGGTG ACTACGTAAA GTATGGTTTC AAAAATGATA CAAACCCAGG TTATAAACAT AAGCTCAGTC AGCTGATGAA GTATCTGACG AAGACTTTTG TCGTCGCGAA AGGGGGAACA ATTTACTACC TAGAGCTTAC TGAACAGCGA GGTGATGTGA TGTTCTTCAC AATGACGGAT GCGACGGAAG CGAGGATGAA CGGTGTTGTG GCTGACGAGT CTTTCAAGTG CATACCAATT GATAATAAGT CTGAGGTTGT ATTTCCCATA TTCGAGGTGG ATAAGCAGAC TGATTCGTTG ATTTTTTCCG AGGTGTTGTT GTCGAAGGAT TTCGTTCAAA GGGCTATCGA ATTCACAGGA AGGCTTAAAC CGAATCAACT CACTCCGGAT AATGTGAATA CCTATTTGAC TTCCACCAAC AACACTATCA TTATTGGTGG TTCATCAAAA AAGAATACTA CGAAAGTCGA TGCTACGTTG ATTCAGCAAA TTACTACCAC TCTGGTGGTT TGGACGGAGC TTATGAATTT GCGCCAAAAG AGAGTGTTGG AGAAGTTAAG GTTGCAGATG AAAGACGATG TGGATTTCAA GTCGTTGGCG CATACTGCTT TTTTGAAGGT GTTCGGTAAA GTGAGCTATT ATCAGAGAGC GCTGCGTTGT TTCGCTAATT GGCTTTCGTA CGTGCATGGC ACTGACGCCA TTCAATTTCA CGATGTCCCT CTGTATGCGG AAGTCACAGA CAGAGTGAAG TTGTGGAAGA CACACGCCCC AAATCAGGGC TTTGTGCTCG ACATGGAAGA CTTGGATGTA AAGATCAAGA TGCATGAGGT GTCCGAAAGA GAAAAGAGAG ATGTTAGTCG GTGCATAGTG TCTGGGAAGT TGGGGGAGTT ACAGATCCAT TCTGAATCTT CTAATAATGA AGAACAAATC AACGGTGATT ATCGTGACAG TCGGAGACGT ACTACTTTTG AAGACCTACT GGAGGGTGAA GTGGCTACGA ATTTTCTTGA TGATTGGTGT GAGAAGAATG ATCATTTCAA TTTTTCGCGT GATGACGCCC AGTCTAAATA TGCTTGGGGT TTGAAATTAC TGAAAGGTAT TTGGGAGTTT TTACTCCCGC CTATGGATTT CGCGCCCGTT TATGTCGATG ATGAGCAAGC AAGACTAAGG ATGGTCCGTG TGAATGAAAG GAGAAATACT TCTGACACTG GTGCTGACGG AGACGTCGCA GCTTGTGAAG TTGCAGCAGA TTTTTCGAAA GCGATGGACA CGTTGGTTGA CGTGGTGAAG AAGATGGATC AGAAGAAGTT GGGATTAGTT GAGAAGGTGA AAGCATCTGC GGTTGCTGTT GTCGAACTGA GTAAGACTAA ACCTGTTACT GGTAACAGCT GCGCGGTGGA TCTCTGGGCT GATTTTGAGA AGAATTTGGA CGACGATGAT GAACCCGGTT GTGGTATTTC CGTAGTGACT AAAGGTAAAG AAATATGTCA AGATAATGTC GGACCAGTGC TTTTGTGTGG TAGTTCTTCA TGCTCCTCTG TTAGTGAGGT GGAGAAAGAA ACTGATGTGG TTAGTGTGAC TGATTCTGGG AATAGTCCCG CCACATGCTG CGGAGGAATG GTTCTTGATA AGTCGGTAAG TATTGCTGGT AACGATGTTT CGGTCGAACT ACCTGTCACT GCTACAACTG TCGCGACAGT TGAGACAGGG ACTGCGGACG GTGTTATCGC TAGTACAGAC GAGTCAGCCT TTAGTGACGT TAACGACAAG TCGTGGGGCT CGGTCGCTGA GGAAGAAAGT GATGACACTT TTTATTCATG CTCTGGTCTG ATTTCAGATA AAGTGAAGAA AAGTAATTTG CCAAAGAGGC CAGATTTCTC GAAATTTCCT ACTGTGCAAC AGAAGGCGAA ACACGAGGCG ATGTGGTATC TGCAATGCAA GATCGTTTCT GATAGGACCA CTCTGAGGAG TATTATTGAT GACCATCTGC GGGGAATGTT TCACAATGGA ACTTGTGAAC TGCCTAAAGA TTCAGCTTTT TTGGACTACA CTGCCGATAA CTGCGGGACC TGGATGTACG GAAAACCGTC ACGTTTTGGT CACAGTTATG GAGTTGGTTT TTCACTGGAT ACGAGGCAGA GAGTAAGTAA GTGTGAACTT GTGAAGTTGA TGTGGAATCA TGACAGCCGT GGTCAGGTAA ATCAGAAACC AGTGAATACG AGAGCTTTCC AGTATTTACT GCTTAGTGAG CTCTCCTTTA TGATGAATGA GATGATAATA TACCGTAACC TTCAGCAGGT GATGCGTAAA AGGGAGAGGA GTAAGCAGGC ACGTATTACA TTGAGAGATG GAGTTCCCGG TTGCGGAAAA TCTACGTGGA TTCTGAACAA TGCAAATCCC ACAAAAGATA TGATTCTATC GGTGGGAAAA GAGGCAACTG AGGATTTAAA AGAGAAATTC ATGAAAAAAC ACAGGTGTGT AGAATCCGAC TTGAAGAGGA TAAGAACTGT GGATTCATTT CTTATGCACG ATTATGACAA GTACAGGGCA GCAACCGTGC ACTTTGATGA AGCACTTATG GCGCACGCTG GTATGGTGTA TTTTTGTGCT GATATACTTG GAGCTAAGAA GGTCATTTGT CAGGGTGATT CTCAACAAAT ACCTTTTATT AATCGCGTTG AATCTATCAC ATTGCAGTAC TCAAAGCTTG TAATTGACGA GACTGAGCAT GTGCGACTAA CGTATAGATC TCCTGTTGAC GTGGCTCACT ATCTCACCAA AAAATCGTGG TACAGTGGAG GAAGGGTTAC TACAAAGAAC CCTGTGATGA GATCTATGAA AACTGTAGGA CCGAGAGACG TCAAACCTAT GACGTCAGTT CACTGTGTTC CTTATTTTAA AGACGCGCAG TACTTGACGT TTACGCAATC TGAAAAAACT GATTTGTACA AGGCGCTGAG GAATAAAGGT CCAGTCACAG TGAATACCGT GCATGAGACT CAAGGAAAAA CCTTTGACGA TGTCATTGTG GTAAGGTTAG AAACTACTGA AAATGAGATT TACCCAGGTG GTAGGAAAGG TCAACCTTAC GAAATTGTGG CAACAACTAG ACATCGCCGA TCATTGGTTT ATTATACTGC TATTGAAGAC AGGCTTTTTG AAGATATTAG TGACATGCAG GATGTCATGG AAAGCAAACT CATGAAGAGT TTGTGTCCTG AATTCGACAA ATGACGGTTT GGGTCGAAAT ATGAGTCCAT CTTAATATGT GATAGAGAGG TAAGGGTACC CGACGTAGGA ACACCTGCAA TTTTGCAGGA CTTCTACGAC AGGGTGTTTC CTGGAAATTC AACGATGGAT TCACATTTCG ACGGGTATGA AGTTTCTACT TCTGACATAA GCATCGAATT GGAGAACTGC ACAGTACAAC CCAACAAAAA CGTTAGGGTG TGGCAAGACA AGAGGGGTTT GGTGCCGGTG ATGCGGACTG CTATGCCGCC TAAACGACAG AATCTTCCGG TTGAGGCCAT GTTAGCGTTG AAAAAACGGA ATATGGCAGC ACCGAAATTG CAAGAGGCGG TCAATGAATT TGAGGTGATA GAGAGGACTA TAAATCGGGC CAAAGAGATC TTTTTCAATG TGGAATTGAT CGACGACAGT GAACTTTCTA CTAGAGAATC CAACTTGCGT TGGTGGGGAA GACAATCTAC GACCGCGAGG GCGCAGATGA AAAAAGAAAT GCGGGTATTG CATGAGATAG ACCTGTGTTT TTACAGTTAC AACATCAAAG GTGATGAGAA ACCTAAGATG GACAGATCAC CCCAGCACGA ATACGGAGCG TTACAGACGG TGGTGTTTCC CGATAAAATT GTAAACGCTC TTTTCGGTCC GGTCATGAAG GAAATCAATG AGCGTATCAG AATGGCTTTG AAACCGCATG TTGTATACAA TTCTAGAATG AATGCCGACG AGCTCAACCG TACAGTTGAG TTCTTAGATC CAGATGAAGA ATACAATGCG TTTGAAATCG ATTTTTCAAA ATTCGACAAA TCAAAAACGT CATTGCACAT TCGAGCGGTT ATCGAGCTAT ACAAGCTTTT CGGTCTGAAT GATTTGATCG CCCTTCTGTG GGAGAAATCG CAATCTCGGA CTAAGATAAG GGACTTTGTA TATGGTATTA CCGCATATTT GCTTTATCAG CAGAAATCCG GTAATTGCGA CACTTATGGT TCAAACACAT GGTCCGCGGC GTTGGCGTTG TTGGAATCAA TGCCATTGGA AAAAGCAAAG TTTATGATCT TTGGAGGTGA CGACTCATTG ATCCTTTTTC CAAAACAACA GGTTGTAGAA GATCCCTGCA GGAGGCTTGC CTCACTGTGG AACTTCGACT GCAAACTGTT TGATTTTAAG CATAACATGT TCTGTGGGAA ATTCTTGCTT AAGATCGGGG ACAGGTTCAA ATTTGCACCT GACCCTATGA AGTTGATTAC GAAACTGGGT CGTAAGGATA TTGCTGATGG GAGATTGCTG TCCGAGATTT TTGTGTCTAT TGGAGATAAT TTCCGGTCTT ACCGGGATTA CAGGATACTC GAACAACTTT CTTTGGCCGT ACGGGAAAGG TACAAGACTG ATGAAGATCC GACGGCTACG TTGATTACTT TGAAGAAGTA CATCTTCGAT TTTAAGCTTT GGGGTAGTTT GTTTAATTAT AGTGGTGAGT TTGTGGAGAG TAGAGTAGAT AGGAACTTTG AATGGTAATT CGCTGTTTCT CGTTGTTTTT ATCTATTGTT CACTTCTCTT TTTCTCTTTA CTGCTAATCA TGACTTCCAA AGATGTCAAA GGTGAATCAT ACGAGTCGGT GTACAACAAG ATGTTGGATA TGCAAACTGA AGCGGTTGGT GCAAATGAGT TGCGTCTGAA CAGGCAGAGG AGTTTCAATG TTGAAAATCG GTATGTCGAG AAAGCACTCA TTCAACCGGG GATTGTTACA AAGATGGCTG ATGCTTGGAC GAGTTTTACG AAAACAAACA AGGAGGAAGG GATGCCATAC AACTTGTCTT TTAGCTGCGT GTTAATAAAC GTTATACCAA CAGTACCTAA GGGTTACGCG GGTACCGTGG AAGTATCACT GCTCGATTCG GGCCTGTCAC CGCTTGAGAA TATCATTCCG GATCAGACGC AAATGATGGA GTTGGGCGCG GGACCACATG TGATGTGTTT CTTTATGCAT TACAGCATAC CTTTAAATGA CAAGGATCGT TCAATCAAGT TGGCTTTCAA AATTGATGCA GAGATGGCTA ACAAAGGTAT GAGTGTGATG AACGTCTACA CTTATTGGAC GCAAAGACAG GGGGCTCAAT CTTCGTATTC TGAACCTCAG AGGTCAACTT GTTCGAAGTT GCTTTTAGGT TATGATAAGA GTTTGAAGAT GAAGACAAGA GGAGATGTCC GACGTTTTGT TGGTCGTTCA CTTACTTTGC ACAATTTGGA GCAATCTGTG CCGCAGATGC TTCCTGCTAA TATTAATGTG CTTAAAGAGA ATGTCCCTTT GTATCGGAAA GAGAGTATAA TGGATCTCAC TAAAGAGGAA AGGGAGAAAA ATGCTAAGTT GGAGGAACTT AGAAAAACTC GTGCTATTCA GACAGAACGT AATGTTGAAG AGATGAAGAA GAGGCAGATG GAGCTGTTGA AAGAGGCTCG TCGTAAGACG GCTGAAGATT CGGTCGCTGC TGCTGACAAG CGTAAGTACC AAATTGGTTC ATCTAGTGGA CAACCAGACA TCACTTTTGG CTCTTTTAAT AAGGTGTGAT AAGTGTGTAT ACTATACATA TATACATTAT TGTATATGGC TTGTAAGTTT GCTACTATAT TTGTACTTTG TATTATTACA TTGTAAAAAT AGTCTAACTT GTCAGACTGA GACAAGTCGT TTTCAGTACG ATAACTGGAA CCGCTTGATA AGCGGGTTAT AAAACATTCA AACCTATTTG AGCAGGTTGC GCTCAAACGT GGTCATTACG ATAAATGACT CTGTTTACCA AACAGAAGTA AATTGGTTAC GTAGTACAGT GCGTTAAACT GTACGACTAT CTTCTAGTCC CTATTGATGT AATTGAAAAA AGATCAATAT TGGGCAATGA CGAAGAGCGA CTGGGCGTCG CGGCTGCTAA GACACAGCAG TTAAGAGGGG TTCAATTCCC CCCCGAACCG GAGGGTTATC CGGCCCA

Products

Productgag
MPIDSSSILG IISEEDVIRA AISTSATKFG SQLHSTVCDH VKETYLDAME RQKTKKKIDV RRDLSQEQLQ LLNDLYPERH IVSSNCERGT HSFAAASRKI ETDLLLSRIP KKSWVYDIGG NWATHIKRND GRRVHCCCPT IDIRDSARKT VSWASIEKYL DEKDEIPTEV GERIKRVQAD EIKIYENLKN KRAQPEDLDG KWYCGNKFEE CVFRAERAYA MAIHSIYDID LMDLANALEE KRIKIMSGTF LFSVDLLLGK KSGSLPTMDG FFEVEGDYVK YGFKNDTNPG YKHKLSQLMK YLTKTFVVAK GGTIYYLELT EQRGDVMFFT MTDATEARMN GVVADESFKC IPIDNKSEVV FPIFEVDKQT DSLIFSEVLL SKDFVQRAIE FTGRLKPNQL TPDNVNTYLT STNNTIIIGG SSKKNTTKVD ATLIQQITTT LVVWTELMNL RQKRVLEKLR LQMKDDVDFK SLAHTAFLKV FGKVSYYQRA LRCFANWLSY VHGTDAIQFH DVPLYAEVTD RVKLWKTHAP NQGFVLDMED LDVKIKMHEV SEREKRDVSR CIVSGKLGEL QIHSESSNNE EQINGDYRDS RRRTTFEDLL EGEVATNFLD DWCEKNDHFN FSRDDAQSKY AWGLKLLKGI WEFLLPPMDF APVYVDDEQA RLRMVRVNER RNTSDTGADG DVAACEVAAD FSKAMDTLVD VVKKMDQKKL GLVEKVKASA VAVVELSKTK PVTGNSCAVD LWADFEKNLD DDDEPGCGIS VVTKGKEICQ DNVGPVLLCG SSSCSSVSEV EKETDVVSVT DSGNSPATCC GGMVLDKSVS IAGNDVSVEL PVTATTVATV ETGTADGVIA STDESAFSDV NDKSWGSVAE EESDDTFYSC SGLISDKVKK SNLPKRPDFS KFPTVQQKAK HEAMWYLQCK IVSDRTTLRS IIDDHLRGMF HNGTCELPKD SAFLDYTADN CGTWMYGKPS RFGHSYGVGF SLDTRQRVSK CELVKLMWNH DSRGQVNQKP VNTRAFQYLL LSELSFMMNE MIIYRNLQQV MRKRERSKQA RITLRDGVPG CGKSTWILNN ANPTKDMILS VGKEATEDLK EKFMKKHRCV ESDLKRIRTV DSFLMHDYDK YRAATVHFDE ALMAHAGMVY FCADILGAKK VICQGDSQQI PFINRVESIT LQYSKLVIDE TEHVRLTYRS PVDVAHYLTK KSWYSGGRVT TKNPVMRSMK TVGPRDVKPM TSVHCVPYFK DAQYLTFTQS EKTDLYKALR NKGPVTVNTV HETQGKTFDD VIVVRLETTE NEIYPGGRKG QPYEIVATTR HRRSLVYYTA IEDRLFEDIS DMQDVMESKL MKSLCPEFDK
Productgag-pol
DescriptionRNA-dependent RNA polymerase
Modifications4152..4154,aa:OTHER
MPIDSSSILG IISEEDVIRA AISTSATKFG SQLHSTVCDH VKETYLDAME RQKTKKKIDV RRDLSQEQLQ LLNDLYPERH IVSSNCERGT HSFAAASRKI ETDLLLSRIP KKSWVYDIGG NWATHIKRND GRRVHCCCPT IDIRDSARKT VSWASIEKYL DEKDEIPTEV GERIKRVQAD EIKIYENLKN KRAQPEDLDG KWYCGNKFEE CVFRAERAYA MAIHSIYDID LMDLANALEE KRIKIMSGTF LFSVDLLLGK KSGSLPTMDG FFEVEGDYVK YGFKNDTNPG YKHKLSQLMK YLTKTFVVAK GGTIYYLELT EQRGDVMFFT MTDATEARMN GVVADESFKC IPIDNKSEVV FPIFEVDKQT DSLIFSEVLL SKDFVQRAIE FTGRLKPNQL TPDNVNTYLT STNNTIIIGG SSKKNTTKVD ATLIQQITTT LVVWTELMNL RQKRVLEKLR LQMKDDVDFK SLAHTAFLKV FGKVSYYQRA LRCFANWLSY VHGTDAIQFH DVPLYAEVTD RVKLWKTHAP NQGFVLDMED LDVKIKMHEV SEREKRDVSR CIVSGKLGEL QIHSESSNNE EQINGDYRDS RRRTTFEDLL EGEVATNFLD DWCEKNDHFN FSRDDAQSKY AWGLKLLKGI WEFLLPPMDF APVYVDDEQA RLRMVRVNER RNTSDTGADG DVAACEVAAD FSKAMDTLVD VVKKMDQKKL GLVEKVKASA VAVVELSKTK PVTGNSCAVD LWADFEKNLD DDDEPGCGIS VVTKGKEICQ DNVGPVLLCG SSSCSSVSEV EKETDVVSVT DSGNSPATCC GGMVLDKSVS IAGNDVSVEL PVTATTVATV ETGTADGVIA STDESAFSDV NDKSWGSVAE EESDDTFYSC SGLISDKVKK SNLPKRPDFS KFPTVQQKAK HEAMWYLQCK IVSDRTTLRS IIDDHLRGMF HNGTCELPKD SAFLDYTADN CGTWMYGKPS RFGHSYGVGF SLDTRQRVSK CELVKLMWNH DSRGQVNQKP VNTRAFQYLL LSELSFMMNE MIIYRNLQQV MRKRERSKQA RITLRDGVPG CGKSTWILNN ANPTKDMILS VGKEATEDLK EKFMKKHRCV ESDLKRIRTV DSFLMHDYDK YRAATVHFDE ALMAHAGMVY FCADILGAKK VICQGDSQQI PFINRVESIT LQYSKLVIDE TEHVRLTYRS PVDVAHYLTK KSWYSGGRVT TKNPVMRSMK TVGPRDVKPM TSVHCVPYFK DAQYLTFTQS EKTDLYKALR NKGPVTVNTV HETQGKTFDD VIVVRLETTE NEIYPGGRKG QPYEIVATTR HRRSLVYYTA IEDRLFEDIS DMQDVMESKL MKSLCPEFDK QRFGSKYESI LICDREVRVP DVGTPAILQD FYDRVFPGNS TMDSHFDGYE VSTSDISIEL ENCTVQPNKN VRVWQDKRGL VPVMRTAMPP KRQNLPVEAM LALKKRNMAA PKLQEAVNEF EVIERTINRA KEIFFNVELI DDSELSTRES NLRWWGRQST TARAQMKKEM RVLHEIDLCF YSYNIKGDEK PKMDRSPQHE YGALQTVVFP DKIVNALFGP VMKEINERIR MALKPHVVYN SRMNADELNR TVEFLDPDEE YNAFEIDFSK FDKSKTSLHI RAVIELYKLF GLNDLIALLW EKSQSRTKIR DFVYGITAYL LYQQKSGNCD TYGSNTWSAA LALLESMPLE KAKFMIFGGD DSLILFPKQQ VVEDPCRRLA SLWNFDCKLF DFKHNMFCGK FLLKIGDRFK FAPDPMKLIT KLGRKDIADG RLLSEIFVSI GDNFRSYRDY RILEQLSLAV RERYKTDEDP TATLITLKKY IFDFKLWGSL FNYSGEFVES RVDRNFE

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