Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200257"

Accession numberr200257 [export]
Locus namecoat protein
Recode1 namepol_r_vir_chinese2
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismChinese wheat mosaic virus [details]

Sequence

GenBank IDsAJ012006.2
SequenceRNA of 3569 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 852)
Descriptionset ratio of coat protein:assembly protein
GTATTTCAAT CTGTACAAGT GCGGTGTTAA CCAAACTAAA TCAGATATAC CTTTCTTCTC CCGAAAAGAA ATAAAATATT TTCGGGAATC GTGGTAACTG ATACTTTGGA ACTGTATACT AAGCCAAGTT TAGGCCCGTT ATGCGATAAA TCCTAGGTTG GTGGAGAATA CGGTTTCGTT GTTGAAGTGG CTGCTGTTAC GCGGCGCTGG ATAAGTTCAG TAGGCTGAAA GACGAGGTTT CTACCGCGTT ATCTAAGTCT ACAGGGAAAG TAACCGTTGA GGACACTGGT GAGGGTAGGA CGCCGGTTAC GGTGGTATTA CCCATGGCCG TGAAATCTGG TTATACTGTT TTCAACAGGG AGTTGAATGT TATGGCCAAT ACTCATGCAT ATATACGTCT CAGTGCTCTT TTGAGCCAAG TTGAGACATG GCAGAGTACG AGGACGAGTG TGTTGTCTCA CCTTGGTATT ATGTTGAACG GGGTAAGTAA GTTGGGGGAA CGTAATTTCT TCTCACGGAG TAAACGCTTC GGTACTCATA CCCTTGACGG GGATGAGATC TTTTGCGACC TTGGCGGAGA GGGGGTCAGT CAGGTACTGA CTAGACTCAC TGTCGCTCTC GGTGCTGCTA AAGGTGAAGG GGCGCAGTCC AGGAATGCAA AGAGGGGAGC ACCACCGGCT GCTGGCCAGA TAGAAACAGA AGAACAAGGG CAGACTGATC AATCGTTGGC TATATCTAAT GCTTTGGGCG AACTGATGAC TTATGTTAGT TCGAAAGAAT ACACTATGAA TGAGTGTTAC ACACAGGATT CTTTCGAGGC TAAGTATAAT CTTAAGTGGG AAGGTTCGAG TTGACGGGAT GGCGTCTCGG ATAAGAGTAG GGTCCAAGTG GTGGAGGATC TGTCTAACAG ACTCACACTG GCTGACGACC TGGGTATCTT ACCGAGACGC GACAATATGG GGATGATCAT CAAAGATGAA CCTGAAGTTG TGTACTCAGA ACTAGAAGAC AGATTACTGA GTTTTGAGCA TTCAGTTTAT CATCCCTGTG CGATAACAGT TGAGAGAGAG ATATCTACTA CTAGTGATCT ACTGGTTGTA CCTGACACTG AAGATGTGGA GTTCGTTGAG AACGATAGTG TTATCGTCAC GGAAGTCATG GTGGATGATG AATCCAATTA CTATTGGCTT TATGCGGTCC TGCTCATCAT CTCCTTTCTT ATTACTGGTT TTATAGCTCT GTCACGTTCT TTTATTCACT TTCTTGGTGA TGGCAGACAG GGACCAGGTG GACAAACACG GTATAGAATA GCCAGTGCGT TGTGGGCCGT AAGACTGTGG TTACTTCGTC ACGCTACATT ACGTTTCTGC GGATTGGGTG TCGTTCGCAA GACGCACACC AGGAGTTCCA TGCGTAGGTA CTTGCGTGAC TACAATTATC AGCTTGACAT GTGGGAAGCT GCTGCCAGCT GTTCGCCCAG CGAGGCACTG ATAGTGGCGG ATCAACATAT ATTCGTATCT GGTGTCATGC GTTTGCTTGA TTACGAGGGC GATCTAACAT GTGTCGGCGA CATCAGAAAA GTGATGACCA ACTACGGAAT GAAAAATTTT TCTTTTGAAA AATGGTTAGA CAAGCAGACC GTTAGTTGTT CTCTAGTCGT CCTGAATGAC AAAGTAAAAA ATGATGACGT GCATCTCGAT GAAAATATGT TATCTTTGGA GAATGCATCT ATCGAGGAGG TTCTTGCATG CGTTATTGAA ACGCAAAGGG GTAGTCTCTA CTTTAATGAC ATCATCGCTT TGCAGTTCGC TTTTAAGCTC ATTGGTACAC CTGAATTTTC AGACTTTGTA CTTGCTTACA AAGGCCCTCT GTATCCTTGT TACGTTGAAG CCATAAAGAG ACATGGCGAC GAGTTGGCTA AGTGGCGAGT TGATGAGGAC AGAAATAGAC AGAGTGAAAA AGCTATCGAG TGGTTGCTGT TAGCAGGTCA AGGTGCTTTT GTTGTATCAT CAGGTGTGAC GGTGGGAGTT CTCATCTATC GGATTCATAA ATGGTTGAAG AAGAGGTTGT TGTTGCGTGC TTTACAGTCT CTACCATCTG TGGGTGGGAG TTCTGGTGGA GGTGGTGGTG CACTGCCTAT GTCAGTGCTC AATCAGTTTG GTCAGGCTCT CACGTTCGAT GAGCGTTTGG CGGCGTTGCA ACACCATCTT GATCTTGGAG AGGATAACTT GGATTATTGC TCTTCTACTG ACCTTAAACA AGAAGTTGCT AACGTTCTTG CTACTAGGGC TGACGATGCC TTTCATGTTG CTGACGTGCC GTACGTTGTC GATGTTGTTA GGTCTGTTGG GTCTGTGTCC ACCAATCTTG GTGGATCTGT TGTTGGAGGT GTAAGTGCTA GGGTCTCTGA CGGTGCCAGT TCTTCTCTAG TGTTGAGTAA TGCGCGTAGT ACTAAGTCTA GGCGTCGTTC AGTGTCCAAG AAAGATAGGG TCTTTCCTGG TGGTTACAGT GTGTATAGTG ATATGTTACC TAGTAAAATA GGTGGGAAAA GTGGTGTGAG TAGTTTGAAA ATGAAAATTG CTAGTAAGCC TTTGGCGATC TAGCATGTTG TTTTTGTATT CACACTCAAT CTTACCATTA ACGTAATCGT TATGACTACT GGTACTCATT CTTGTGAGAA GTGTGCTAAC GGTTTCTCTA ATGTCATCTG CGTTAGTAAG TATCGTACTA GCGTGTATAA ATCTCTAGGT TTGGTTCCTG TTAAGTGTCG TCTGCCTGCA GATTGTGGTG TTAATTGTGG TATGCCTGCA GCTTTTGTTC TGGTGAAAGG ACATCCAGAG TTGTCCATGG ATGGTTTCTG CGGTGAAAAA CATAGGGGTT ATGTGGTTTC AGGGGCATGG CGTATGGCTC AACTTCAAAC TTTAAATGCT GAGTTGGATA AGTTGGAAGC CAGGGAAGAA TCGTTGCGTT CGCAGATTCG CGGTCTGAAT GAGGCCATTA AGGCCTCAAC CGCACCCGTT TACGCTCCAA TTAAACTTCA AAAGCTGAAA GTTGAAGCTT CCAGCGTCGA TGAAAAAAAA CAGACTCGTA GCACTGATCT CTGTGCTGTG ATGACTTCTG TTATGACTAA GCTGTCACCT GATTCCACAC CGAAAAAAAC TCGTGTGGAG TAATTGTGTA TGTCCTTACT GACATCTGCG TTTGTATCTG TGTGTGCGTG CTGGATTCGG TAACCAGGAT AAAGAACCCG GCCGAAAATC GTTCCAAAAA ATATGGAATA AAGGAGGGGC AAGTCTGTCA CTTTGGCTAG AAGAGTTATC ACACTCTATA AAGAATGACG CGGTCTTTGC GATAAAAGAT GGTGCTTGCT ATTTCACCTA AATCGAAATA GCGACTGGGC GTCCCGCAGT ACGTTTAAAC TGTAGGGACT ATCCTCTAGT CTCTACTGAT GTAATTGAAA AAAGATCAGT ATTAGATTGT GATGGGGAGC GACTGGGTGT CGCGGTTGCT AAGACACAGC AACTAAGAGG GGTTCAATTC CCCCCCAAAC CGGTGGGTAA ACCGGCCCA

Products

ProductCP
Descriptioncoat protein
MAVKSGYTVF NRELNVMANT HAYIRLSALL SQVETWQSTR TSVLSHLGIM LNGVSKLGER NFFSRSKRFG THTLDGDEIF CDLGGEGVSQ VLTRLTVALG AAKGEGAQSR NAKRGAPPAA GQIETEEQGQ TDQSLAISNA LGELMTYVSS KEYTMNECYT QDSFEAKYNL KWEGSS
ProductCP-ORF2
Descriptioncoat protein, readthrough
Modifications852..854,aa:OTHER
MAVKSGYTVF NRELNVMANT HAYIRLSALL SQVETWQSTR TSVLSHLGIM LNGVSKLGER NFFSRSKRFG THTLDGDEIF CDLGGEGVSQ VLTRLTVALG AAKGEGAQSR NAKRGAPPAA GQIETEEQGQ TDQSLAISNA LGELMTYVSS KEYTMNECYT QDSFEAKYNL KWEGSSQRDG VSDKSRVQVV EDLSNRLTLA DDLGILPRRD NMGMIIKDEP EVVYSELEDR LLSFEHSVYH PCAITVEREI STTSDLLVVP DTEDVEFVEN DSVIVTEVMV DDESNYYWLY AVLLIISFLI TGFIALSRSF IHFLGDGRQG PGGQTRYRIA SALWAVRLWL LRHATLRFCG LGVVRKTHTR SSMRRYLRDY NYQLDMWEAA ASCSPSEALI VADQHIFVSG VMRLLDYEGD LTCVGDIRKV MTNYGMKNFS FEKWLDKQTV SCSLVVLNDK VKNDDVHLDE NMLSLENASI EEVLACVIET QRGSLYFNDI IALQFAFKLI GTPEFSDFVL AYKGPLYPCY VEAIKRHGDE LAKWRVDEDR NRQSEKAIEW LLLAGQGAFV VSSGVTVGVL IYRIHKWLKK RLLLRALQSL PSVGGSSGGG GGALPMSVLN QFGQALTFDE RLAALQHHLD LGEDNLDYCS STDLKQEVAN VLATRADDAF HVADVPYVVD VVRSVGSVST NLGGSVVGGV SARVSDGASS SLVLSNARST KSRRRSVSKK DRVFPGGYSV YSDMLPSKIG GKSGVSSLKM KIASKPLA

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