Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200260"

Accession numberr200260 [export]
Locus namevp9
Recode1 namepol_r_vir_ctfv
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismColorado tick fever virus [details]
AcronymCTFV

Sequence

GenBank IDsAF000720.1
SequenceRNA of 1884 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 1,052)
GACATTTTGT GTCACGAACG TTCACCCTGC GTTCAGCATC ATGTTTGGAT ATCTGCAGCT CATCAACCCC ACCACTGACA TTTACATTAA AGATTATGGA AACTTTTCTG GGATTGTTGC ACACCAAGCT TATGACCCTG TCCGCCGAGA CCATATGCTT TTGAGATCAA TGAAATTGCA CTTTGGACCA AATTCAAAAT TACTATGGCT AGGCGATTTT CACGCCATCA CCCTGTCACA TGCAAATATG ATATTTGGAG CAAGCTCGGT CGGATTTAAG GGCGTTAATG TGTCTACTTT GCCCCCTGAC ACCCTGACGA CTGGCATTCG CCCTCGCCCC GTAGTCACAA TGGATTTTGC ACAGCTAAAA GGTTTTTACA GCGACTTAGC TCAGAAGGAG GATTACATCA TGTATTTCCA TGACATGGTG AAGTTTGTCA GCCAGACAGG AGGTGCTCCT GTATCATTGA GAGATGTGTT CTTGTGGATT AGTGAAAGCG TGACCGGGCC TGTTGTCATT CGGACAGATT GTGTTACGGG CTGCAACAAC TTATGGCCAA GTGGTAGTGG ACACTTTTAT TTCCCTTATG AGAGGAAGAC CAAATTCAGG TATGGCACGT TTGTTGAGTG TGGCAAAAAT TTGACTTGGT CCGAAGGGCC TCAGTGGGAT GTGAAGAGTT ATGTTGTGGG CTTTAACTTT GTCACACGAG CGAACTCGCT GCTTGGTGGG GGTTTTGACG AGGTTTGCTA TCGATTGATG ATGCAGGCGG AAGTGCCTCG GCAGGTTGCA GAGCAAGGAT TGACACTTGA ACAAGCAGTT CGGAAGTTGG CGTCAGAACA TCACATGTCT AGACCGCAAT TGACTTCACG CCGAGTGCCT GGAATCACAG ACCAGACAAA GTATGAGGCT TACGTGGTAT GTGGTCCTTT CCGAACTGGA CAGGTAGTGG CTGATTCTTT GCAGATGGCT GAAGATCTGG CGTGGCGAGA GATGCTTGGT ACTCTGAAAA CATTGATTCA CGATGAAGCG CGTCAAACCA AGGGCTGCTG TTGACGGTGT TGGCCTGGTG AGCTGTACCT CATTAACATC GAGAGTGCAG GCTTTCGTGA AGGAGCTTCA GCGGCTGCGG CTTACCAGGC GGGCTTTTTG CGTGCTTTTT ATGGGTGTCT GAATACATCT GTGTGTTCCT TTTCGTCTTT GGATGATGGG TTGAGGTGGC TGTGCACACG ATTGAGCACA AAATCCATTG GCGCAAAAGG ACGAACCGTG GTTCTGTTTG GATGTCACTC GGAGGGTGAG GTACTGGCAG ATGGATTCGG AAAAACATAT TCAGCAGCAG AGGCGCGTGA GCAGGTAGCC CTGTCGGGAA AAATCGGTGG GAGTGCTCAA GTGATTGTTG TGTGGCAACG TTGTCGTGAG TCCAAACTCC AAAGGTTGCT GCCTGAATTG GCTATGGTGT CTTATGTGCC AGAGGAGGTT GTTGCAGGCT TTAAGCGAGT GCGGGAGCTT GAGACCTACC CCCAATGGTG TCTATGGTTA TATAGAAGTA TGATTGAGTC TATGGGGGGT ATTGATGTTG GCGTGCGCGA CGCATCTCCG TTAACTGAGA GCGGGGTTGT TTATCAGGTG GAGGCTGCTC AGTACGGAAT GCGAACGACG CGAGTGAGGA GGGCAGATGG CACGCTTGAT TACCAGGGTC TGAGTTGGAC ATCGTTGTTG ATGCTGTTGT TGGGTCACTA TGGGGCTGAC CAGACGTATG AGGCTCTTCG CGTCAGTTCC ATGTTCATCC GTGCTCGTGA AGTCGGCTGG CGCAAGAGGG GGACCTTTTC CTGCATAGTA TCCACATGAT GTGACACACC CTCATATAGG GAATCCTTGC AGTC

Products

Productvp9
MFGYLQLINP TTDIYIKDYG NFSGIVAHQA YDPVRRDHML LRSMKLHFGP NSKLLWLGDF HAITLSHANM IFGASSVGFK GVNVSTLPPD TLTTGIRPRP VVTMDFAQLK GFYSDLAQKE DYIMYFHDMV KFVSQTGGAP VSLRDVFLWI SESVTGPVVI RTDCVTGCNN LWPSGSGHFY FPYERKTKFR YGTFVECGKN LTWSEGPQWD VKSYVVGFNF VTRANSLLGG GFDEVCYRLM MQAEVPRQVA EQGLTLEQAV RKLASEHHMS RPQLTSRRVP GITDQTKYEA YVVCGPFRTG QVVADSLQMA EDLAWREMLG TLKTLIHDEA RQTKGCC
Productvp9-orf2
Modifications1052..1054,aa:OTHER
MFGYLQLINP TTDIYIKDYG NFSGIVAHQA YDPVRRDHML LRSMKLHFGP NSKLLWLGDF HAITLSHANM IFGASSVGFK GVNVSTLPPD TLTTGIRPRP VVTMDFAQLK GFYSDLAQKE DYIMYFHDMV KFVSQTGGAP VSLRDVFLWI SESVTGPVVI RTDCVTGCNN LWPSGSGHFY FPYERKTKFR YGTFVECGKN LTWSEGPQWD VKSYVVGFNF VTRANSLLGG GFDEVCYRLM MQAEVPRQVA EQGLTLEQAV RKLASEHHMS RPQLTSRRVP GITDQTKYEA YVVCGPFRTG QVVADSLQMA EDLAWREMLG TLKTLIHDEA RQTKGCCQRC WPGELYLINI ESAGFREGAS AAAAYQAGFL RAFYGCLNTS VCSFSSLDDG LRWLCTRLST KSIGAKGRTV VLFGCHSEGE VLADGFGKTY SAAEAREQVA LSGKIGGSAQ VIVVWQRCRE SKLQRLLPEL AMVSYVPEEV VAGFKRVREL ETYPQWCLWL YRSMIESMGG IDVGVRDASP LTESGVVYQV EAAQYGMRTT RVRRADGTLD YQGLSWTSLL MLLLGHYGAD QTYEALRVSS MFIRAREVGW RKRGTFSCIV ST

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