Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200261"

Accession numberr200261 [export]
Locus namereplicase readthrough
Recode1 namepol_r_vir_cymrsv
Descriptionviral or mobile polyprotein
Recode statusValidated

Organism

Genomic classViral Genome (Virus)
OrganismCymbidium ringspot virus [details]

Sequence

GenBank IDsX15511.1
SequenceRNA of 2457 nucleotides [sequence]

Recoding event

Event typeReadthrough (position: 889)
Descriptionproduction of fusion protein and set the ratio between two protein products. CymRSV; Accession no. X15511
ATGGAGACCA TCAAGAGATT AATCTGGCCT AAGAAAGAAA TTTTTGTAGG CGATTTCGCG ATCGGTGTTA ATAGGACGGT ACCGGTGGAT GTCTTCCAAT TGGTGTGCCG TGTTGTGCTG AGATATATGA GGACAGGGAA AATAGAGTGT GAGTCAGACA GTCTGTCTAA GTTCGTTGTG GAGTTATTAA AGACAGATTG TGCTGCTAAG TGGGAATGGT TTATGAAGAG ACGGCAGGGG GGTGATTACA TCGTCCCTCT ATCTATAGCC ACCATCCCTC TCATGCCGCT GTTGAGTTGT ACCACCTCGG TACGCGCAGT CTCAGTCGGG GTTTTGGGTT GTGGGTTTAG CTCCAATATC CCAATACCTC GTCTATCTGT GCCAAGGAAA GGGTTGCTCC TCAGACTGGC GGCCGGCCTA GCGTTAGCTC CTATATGCGC GCTGGCCGTG TACGCTACCC TGCCCAGGGA AAAACTGTCC GTGTATAAGC TAAGGACGGA GGCACGCACA CACATGGAGG ACGAGAAGGA AGCGACGGAT TGTTTAGTGG TGGAGTCGGC TCGTGAGCTC AAGGGTAAGG ATGGTGAGGA TCTGCTCACT GGTAGTAGAA TGACCAAGGT TGTGGCTTCG ACAGGACGTC GTCGCAGGAC ACCATATGCA GCGAAAGTTG CACAGGTGGC ACGTGCCAAG GTTGGGTACC TCAGGAACAC TCCTGAGAAT AGGCTGATCT ACCAGAGGGT AATCATTGAA ATCATGGACA AAGATTGCGT CAGGTATGTT GACAGGGATG TCATATTGCC AATGGCTATT GGATGCTGCT TTGTGTACCA GGATGGAGTG GAGGAGTCGG CGGCACTTTG GGGGTCACAG GACTCCCTGG GTGTGAAATA GGGAGGCCTA GTGCGTCTAC CTGGGGTTGT GACACAGATC AATCGAGATA TCCCATCTGA TGTGTTACTT CCTCAGGAGG TGCTAGAGGT TCGCACAGGA CCTCCCATAG CTAAGGACCG TAATATATTT ATGGTTGCAG GTTGCCCATC ACAGGCACGG TTCTTAGTTC ATAATCACTG CCTGAAAAAC CTTAAAAGGG GTCTTGTGGA GAGGGTTTTC TGCGTCGAGA AGGACGGTAA ACTCACTCGC ACTCCACAAC CTACCAAAGG ATCCTTTGGA CGTCTTTCCC CGTTCAGGAA AGCAGTTTGT GAGAAGGTTG GGGTGGCCCA TCGCTTAGGG TATGACGGGT TCCTGTCATA CTACAGTGGT GCGAAACTCC GTACTTACAC GCGAGCTGTG GAGAGTCTGC ATATCACTCC TGTTTCAGAG AGGGATAGTC ATCTGACTAC CTTCGTGAAA GCAGAGAAGA TATCGACGTC TAAGGGTGAC CCAGCACCTA GGGTGATACA GCCTCGAAAC CCTAGGTACA ATGTGGAACT TGGAAGATAT CTACGGCATA TGGAATCCAA ACTAATGAAA GCTGTTGATG ACGTTTTCGG CGAAACGACG TGCATCAAAG GTTATACAGC TGATGAGGTA GGCGCAATCT TCAGGAGGAA GTGGGATAGG TTCGATAAAC CTGTTGCCAT TGGTCTCGAC GCGTCTAGAT TTGATCAACA CTGTTCCGTT GAAGCGTTGC AATATGAGCA TAGCTTCTAC AGGGCCTTGT ACCCTGGCAA CAAACTCTTG AGTAAGTTGT TGGAATGGCA GCTCCATAAC AAAGGTAAAG GTTATGTCCC TGATGGAACC ATAACTTACA AGAAGGAGGG CTGTCGTATG AGTGGGGATA TAAATACCTC GTTGGGCAAT TACCTGCTGA TGTGCGCGAT GGTACATGGG TACATGCGTC ACTTGGGGAT AAATGAGTTT AGTCTGGCAA ACTGCGGGGA TGACTGCGTT TTGATTATCG AGCGCAGGAA TCTTAAGCGG GTACAGGGAA CACTTCCTGG TTATTTCCTA AATCTAGGTT ATACAATGAA GGTGGAATCC CCTGTATTTC AATTGGAAGA GGTTGAATTC TGCCAGGCAC ACCCCGTACA GTTTCAGGGC GGTTGGAAGA TGGTCAGAAA TGTCCGCACA GCCATGAGCA AAGATGTCCA CTGCGTTAAC AATATACGCG ATCTGGCAAC AAGGAGGGCT TGGAGTAATG CCCAACACCA TGGTGGGTTG GCGCTTAGCG CTGGTATACC TGTGGTTGAA AGGTTTTACT CTAGGTTTCC TCTGTATGAC ATGCCCGTCA AACATCAGCG TATTGACACA GTGACAAACG TACATAAATG GCGCGGATCA GGTGGGAACT ACCATGTGAC CCCGGAGTCT AGAGCTAGCT TTTGGGCGGC ATTTGGACTC ACGGGGGATG AACAGGTGGC CCTTGAGGAT CGTCTGGATA GATGGGAGAT GGATCTATTT GGAAGAGAGG GTGTTGACGC TCATGAGCCC AGCATCCTTG ATTCCGCCGT AGCTTGA

Products

Productgag
Descriptiongag capsid polyprotein
METIKRLIWP KKEIFVGDFA IGVNRTVPVD VFQLVCRVVL RYMRTGKIEC ESDSLSKFVV ELLKTDCAAK WEWFMKRRQG GDYIVPLSIA TIPLMPLLSC TTSVRAVSVG VLGCGFSSNI PIPRLSVPRK GLLLRLAAGL ALAPICALAV YATLPREKLS VYKLRTEART HMEDEKEATD CLVVESAREL KGKDGEDLLT GSRMTKVVAS TGRRRRTPYA AKVAQVARAK VGYLRNTPEN RLIYQRVIIE IMDKDCVRYV DRDVILPMAI GCCFVYQDGV EESAALWGSQ DSLGVK
Productgag-pol
DescriptionRNA-dependent RNA polymerase
Modifications889..891,aa:OTHER
METIKRLIWP KKEIFVGDFA IGVNRTVPVD VFQLVCRVVL RYMRTGKIEC ESDSLSKFVV ELLKTDCAAK WEWFMKRRQG GDYIVPLSIA TIPLMPLLSC TTSVRAVSVG VLGCGFSSNI PIPRLSVPRK GLLLRLAAGL ALAPICALAV YATLPREKLS VYKLRTEART HMEDEKEATD CLVVESAREL KGKDGEDLLT GSRMTKVVAS TGRRRRTPYA AKVAQVARAK VGYLRNTPEN RLIYQRVIIE IMDKDCVRYV DRDVILPMAI GCCFVYQDGV EESAALWGSQ DSLGVKQGGL VRLPGVVTQI NRDIPSDVLL PQEVLEVRTG PPIAKDRNIF MVAGCPSQAR FLVHNHCLKN LKRGLVERVF CVEKDGKLTR TPQPTKGSFG RLSPFRKAVC EKVGVAHRLG YDGFLSYYSG AKLRTYTRAV ESLHITPVSE RDSHLTTFVK AEKISTSKGD PAPRVIQPRN PRYNVELGRY LRHMESKLMK AVDDVFGETT CIKGYTADEV GAIFRRKWDR FDKPVAIGLD ASRFDQHCSV EALQYEHSFY RALYPGNKLL SKLLEWQLHN KGKGYVPDGT ITYKKEGCRM SGDINTSLGN YLLMCAMVHG YMRHLGINEF SLANCGDDCV LIIERRNLKR VQGTLPGYFL NLGYTMKVES PVFQLEEVEF CQAHPVQFQG GWKMVRNVRT AMSKDVHCVN NIRDLATRRA WSNAQHHGGL ALSAGIPVVE RFYSRFPLYD MPVKHQRIDT VTNVHKWRGS GGNYHVTPES RASFWAAFGL TGDEQVALED RLDRWEMDLF GREGVDAHEP SILDSAVA

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