Recode v. 2.0 / Database of translational recoding events.

 

Details for "r200264"

Accession numberr200264 [export]
Locus namereplicase
Recode1 namepol_r_vir_galinsoga
Descriptionviral or mobile polyprotein
Recode statusReviewed

Organism

Genomic classViral Genome (Virus)
OrganismGalinsoga mosaic virus [details]

Sequence

GenBank IDsY13463.1
SequenceRNA of 3803 nucleotides [sequence]
OrganisationSequence (1)

Recoding event

Event typeReadthrough (position: 66)
Descriptionproduction of fusion protein and set the ratio between two protein products.
GGTAAAGACG CCAATCTTTG CTAGTCAACC AAAGACTATA ACATGGGGGC TATATCGAAG ATTTCTAAGA TTAGTTCGTT CGTAGTGGCA GGCATTGTTG CATATAAGGT TGGTAAAGCT ACATACAATG CTTTTAGGTA CAGGAACCAG GAATCTATTA CAGCAGCCCG GGACCTCCAA GCAGCAGTGG AAGCTGTGGA AGAACAACCG GAATTCGGTA GTGTAGAAGA ATGTCTTGAG GAAACTCCAG CTTCTCAATC TGAAAGAACC ACCATTCAGA ATGAGGGGGA CCTAGCCAAA ATGCCTGTCA GTCGTAAACG TCGTATTCGA AACAGGAAAC ACGGTCGGTT TGTTAGCTAT CTAGTTAACG AGGCTAAGGC AGAGTACGGA CTACCCAAAC CAACTGAAGC ATATAGGCTA ATGGTTGGTG GATTTCTCAA TCGATTATGT AAAGAATGGG GAGTGGTGAC TAGCCACACA CATCAAGCGG TTTCTATTGC CCTGCCACTT GTCTTCGTTC CGACGAAGTT CGACGTGATG GGGAAAGCTA TGTGTGCCAC TACCCGGACG AACCAACTCA TAGGGGAGAA TTCCACTGAT CAAGCTACAG GGTGGTTTGA CAATGTTCTG GGAATTGGAG GCGGCGTTGG CCTCCGGTTC CTGGGCAAAT AGGGGTGCCT TGAAAGGAGG CTAGGGTTCT CTACCACAGT TTCTCGTGGT AGTCACCCCG ATCTGGTGGT CAAACCATCA GGGCGCCCGG AGAAACAGCG GCAGTTATCC GCTATAGTGG ACTCATGGGG TCGCAAACCA TTGGTGTTCA CAATAACTCG TCTCGCCAAC TTGCGGAGGG GCATGATTGA GCGAATGTAT TATGTAGAGC GAGACAAAAA TCTCGTGGAA CCCCCAGCAC CTAGTGTGGA TTTCCGTCTT CCACACTTCT CGTCTGCGTT CAAGAAGGTA ATTGGTCGTC ATACCCCGGT AACTCGACAA GCTTTTGTTG AATTTTATAG GGGCAGGAAG AGAACCATTT ACGAGAAAGC GGTGGAGAGC TTGTCCGCAG CTCCAGTAAC CCACCGAGAT GCGAGACTAA AGACGTTTGT CAAGGCAGAG AAGCTGGTAT TGTCGCGCAA GCCCGATCCA GCTCCTCGGA TAATCCAACC GAGGGCGCCA CGATATAACG TTGAGTTAGG GGTGTATTTG AGACCGTTCG AACATAAAGC GTTTAGAGCA GTAGAACGCG TATTCGGGAG TCCAACTATC ATGAAAGGCT ACACAGCAGA GGAACAAGCA TCTATAGCGA GAGAAAAGTG GGATCGCTTC TCCAAACCGG TGGCGATTGG TTTGGATGCT AGTAGGTTCG ACCAGCATGT TTCTGTTGCG GCTTTAAAAT GGGAGCACAA ATTGTACCAT CATGCTTTCA ATCATGATAA AACTCTAAAG AAGTTATTAA AATGGCAAAT TCACAATGAG GGAACCGCTT TCGCTAGCGA TGGGTGTATC AAGTATAAGA AGACTGGGTG TCGAATGAGT GGTGACATGA ATACAAGTCT CGGGAACTGT TTGATTATGT GCGGTATGGT TTACGACCTC TTGGTAACAC ACGATATAGA CGCAGAATTG CTTAACAACG GTGATGACTG TGTACTCATA TGCGAGAGGT CGGAGGAAGC GCATTTACTA GAAGTCATTC CCCAGTATTT CCGTCAATAC GGTTTTACAA TGGAGGTGGA AAAACCCGTG CACATTTTCG AGAAGCTCGA GTTTTGTCAA ACTCAGCCAG TCTATGTCGA TGGAAAGTGG ATTATGGTGA GGAAACCCAA CCCTGCTATG AGTAAGGACC TCACGTGTTT ATTGCCAATT CAAAATGAAA ACAACTTCAA GGAGTGGCTA AGTGCAGTTA GCGAGTGTGG GTTAGCTTTA ACGGGTGGAG TCCCGTTGTG GCAAAACTTC TACCAAGCCT GCAACTTAGG AGCGGCCCGC ACCGGCTTCA CGAAATCTGG TCTCTTCACA GAGTCCGGTT TAGCCTACGC ATCCCGTGGT TTACACAGGA GGTTTAGTGA ACCTAGTGCG GAAACTCGCC ATTCATTCTA TCTTGCTTTT GGCATCACGC CTGACCTCCA ATTGGCGTTG GAGAAAGAAC TCGACAGCAA GATCATGAAC GAGTGGACCA TGATTCCCCG TGATACGCGC CAACGTACCT ACTACTCTAC AATCAGCAAT GAACTCACAT GATGACGGAA ACAATAGTGA TCCATCTCCG GGAAATTACA GTCGAAATCG GGGCGTACGA AATAAGGGTA TGTCAGGAGT CAAAGAGCAA GCCGTTGGAC AAGAGATCCA GAAACAGCAC CAGGGACGAG GTAATAGCAC AATGGTCAAT GTTGCAGATA CCCAAACCAT AACGGTGACA AACAACTTCA ATTTCTGATG AAGTACTGTC GGTGCAGTGA TACGGCGCCA ACCGATCATA TCACTCTTCT CTTTGTAATC TTCATACTGT CAGGACTTAT TTTATCTCTG TGTACCAATA TAACATCAAA CAATTATGAA AACCACACAA CCGAAAACAA AACCCAGTGG ATCACCATTG GCGGACAACA ATAAAAGCTA TCGTTCCAAT CGAACCAACA AGCAGAAGAC ACAGGACCAG TCAGCACCTG TTGCCATCTC ACGCCAAGTG AGGGGGAGCG TTCCTAAACT CGCCGGCAAC AGACCGTTCA CATTTGGCCA TCGAGAACTA ATCGCCACCA TATCCAATAC TGTACTCTTC CAAGTGAATG GCGGAGTGGG GGGTAATCTC TACCGACTTA ACCCCGCTAA TTCCTCCCTA TTCACCTGGT TGCCTAGCAT ATCGGCGAAC TTCGACCAGT ACAGATTCTT AAAGGTCTGG CTTGAATATG CCCCATTTTG CTCAACCACT GAGGCTGGCA GGGTGGGGTT GTACTTCGAC AAAGACTCAC AAGATCCTGA GCCTACTGAT CGCGTGGAAT TAGCGAACTT TGGTCATCTT AGTGAGACCG TGGCATGGTC TCCCATCGAG TTACATCTAC CGACCGACAA TGTGGTGCGG TATATGAGCG ATTCTTCCGT TTCAGATCCT AAGTTGATAG ATCTGGGGCA GATCGGGTTC GCCACTTATG GTGGCGGATC TACCAATGCA ATTGGGGACT TGTTCATACA TTACACCATA GAACTGCAGC AACCTCAGCC AACCTACTTT GCAGTCCAGA CTCTCCAATC TGGAAATGGC TCTAGTAGTG CCGGCCCCAC TGTAGCCGCT GTAACGGCTA GCACTGGCAC CAGTACTACT CTTACCTTTC GAAGCCCGGG AACGTATCTC GTCAATCTTT TCCAGCGGTC GCTTACTTTC ACGAGTATAG TGGCAACTGG AGGGACCGTT ATAAATTCCC AGGCTACCCT GCAATCAGGC GCGACGGCAT ACTGCAGCCA ACATAATGTA ACTGTATCAA CTCCAGGTGG GGCACTAGTG GCAACGGGGA CGGGATTTGG AAACTATAAT TTCCAGGTCA CTCGTGCTAG GGTACAAAAC AGGTGTGATC TTCTCTAGAG GAAGATGCTT GGGGGTGTTC CCCTAAAGTT CAGAATGGTC TATCAGGGAG CAGGCACTTT TCCGGCTTTG GCGAGTCGTC TCCACTTGTA TACGAACAGT GAGGGGAAAA GTTATCTGAT AGAAGAATGA ACCATGGACA AGGACACTCT AAACCACCAC TAAGAAGCTA TAGGGAAACC TTGCTGAGGG CAGTGAGTGG TCGTACCAGA ACGAATATGG CTTTGCCCCG CCC

Products

Productgag
HGGYIEDF
Productgag-pol
DescriptionRNA-dependent RNA polymerase
Modifications66..68,aa:OTHER
HGGYIEDFQD QFVRSGRHCC IQGWQSYIQC FQVQEPGIYY SSPGPPSSSG SCGRTTGIRQ CRRMSQGNSS FSIQKNHHSE QGGPSQNACQ SQTSYSKQET RSVCQLSSQR GQGRVRTTQT NQSIQANGWW ISQSIMQRMG SGDQPHTSSG FYCPATCLRS DEVRRDGESY VCHYPDEPTH RGEFHQSSYR VVQQCSGNWR RRWPPVPGQI GVPQKEARVL YHSFSWQSPR SGGQTIRAPG ETAAVIRYSG LMGSQTIGVH NNSSRQLAEG HDQANVLCRA RQKSRGTPST QCGFPSSTLL VCVQEGNWSS YPGNSTSFCQ ILQGQEENHL RESGGELVRS SSNPPRCETK DVCQGREAGI VAQARSSSSD NPTEGATIQR QVRGVFETVR TQSVQSSRTR IRESNYHERL HSRGTSIYSE RKVGSLLQTG GDWFGCQQVR PACFCCGFKM GAQIVPSCFQ SQQNSKEVIK MANSQQGNRF RQRWVYQVQE DWVSNEWQHE YKSRELFDYV RYGLRPLGNT RYRRRIAQQR QQLCTHMREV GGSAFTRSHS PVFPSIRFYN GGGKTRAHFR EARVLSNSAS LCRWKVDYGE ETQPCYEQGP HVFIANSKQK QLQGVAKCSQ RVWVSFNGWS PVVAKLLPSL QLRSGPHRLH EIWSLHRVRF SLRIPWFTQE VQQTQCGNSP FILSCFWHHA QPPIGVGERT RQQDHERVDH DSPQYAPTYL LLYNQQQTH

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