Recode v. 2.0 / Database of translational recoding events.
Details for "r200270"
| Accession number | r200270 [export] |
| Locus name | RdRp readthrough |
| Recode1 name | pol_r_vir_mcmv1 |
| Description | viral or mobile polyprotein |
| Recode status | Reviewed |
Organism
| Genomic class | Viral Genome (Virus) |
| Organism | Maize chlorotic mottle virus [details] |
| Acronym | MCMV |
Sequence
| GenBank IDs | X14736.2 |
| Sequence | RNA of 2898 nucleotides [sequence] |
| Organisation | Sequence (1)
|
Recoding event
| Event type | Readthrough (position: 1,315) |
| Description | production of fusion protein and set the ratio between two protein products. MCMV; Accession no. X14736 |
ATGGCGACCC TACCTTCAAT TCACGCATTT TGGAAGCTGT GGTGGCCGAC GTTCTCGGAG GAACGGAAGA
TGACGGTGGT CCAAGCCTTG AGGAATGGTT TGACGCGCAA ACTCTTTCAG ATTACACAAA TTGCGCAACA
GATCCTCCGA TGGCCACCGT ACATACGCGA GAGAATGACA TCAAGTCTTG GACAGAGCTT AGTGAAAACT
TTCCAGACCT TGTTAGGTAT CCGGAAAGCC TTGTCGAGAC TCTGCTTGAC ACGGAACATG AATGTGGACA
TTTTTACGAT GCTCCTGATT CCTTTCAAAT TTCTGTCACA GCTATGTTCA CAGATCGTTG CAAGTGCCAA
TTTTGTGATC CAAACTTTCA GGCACGGTCT CTCTCGCGGG CTCTGCTTGG CCCGTTGCCG GAATCCGGAG
ACGATGCGGA GTGGATGGAG CAAGCATACA CTCCAGATGC AGAATTGTTC GTCAACGAGC CCACTGATGA
CCCCATTCCA ACCACAGATT GCAAGAGACC TATCCAACCC ACATGGTCTG TGGATGTCTA CTCGAAACAA
GTTGACTCGG ACTGGGGGCT CAGCGATTCA ACAAACGTCA CGGTATGTTC GGCTAGCAGT TCGCTTCTCC
CTGCTGGCCG CGGGGGCATA TATTTCATGT GTCCTCGCCC GGAAGGCATT GAAAGAGTAT GTCTACAGGT
GGGAGCTAAA ATCCGATCAG GAGCTCCCAA CTCGGGAACA ATCACAAATC TCCCAGGTGG AACAGGCTAT
GGAACAGAAT GGAGCGATGA TGGTTATGAA ACTCAATGGT CCGACGGCCC CTATTCTATC CCTTCAGGAC
TGTCTGACTA AACACGTTCT GGTTCCAGAG ATTGTGGACG AAGAAGGCAC AGTAACACAA AAAGAACAGT
CCACTTTTCT CATCCGTGAG TTTGGTCCTG CCGTCAGAAA CCTAGTGACC CTCGCAAAGC TAGAATTCGG
CGGAATTCCA AAGAAAACTA CAGCCAATGA ACTTACGGTT TGGCGGTTCC TAGTACGGAA GTGTGAACAT
GCAAATATGA ACCCAACTGA CTCCCGTACT GCCATTTCAA TGGCCCTGCC ATACGTGTTT ATGCCGTGTC
GCACTGATGT TGGAAGAGCT TCAATTCCAC TGCGTGATGA ATCCATTGAA ATCTGTCGCC AATATCGCGC
ACAATTTGTG GAGGAGACAC CCCTACGGCG AGTATTCAAC AACCCATTGA GCGGAAAAGC ATGGCGTAAC
TGGGTTAGGC ACCTGGGTGG GCTGGATGAT CCAGCCCTAT TCCAGGAGTT GAAATAGGGG TGTCTTGAAG
AGTGGCTTGG GGTGCAGTCT CGGCGCACAC GTGCGCGGCA CCCCAAACTC CGTAGCCACT TTAAAGACAC
GAGACACAAA ACCCGCAGAG TGTTCCGGAT TGCAGGTTTG GGCAACCTGT ATGAATTTGG AGTCCACAAC
AACTCTGCGG TAAACCTGGA ACGTGGACTA ATGGAGCGAG TATTTTATGT GAAAGATGAT AAGGGGGAAC
TCGTTTCATG CCCTGAGCCT ATTAGTGGGA TATTTTGGAA AAACTTGAAG GGATTCAGAA ATAGCATTGT
ACACCATGTG GGACACAGAC ATCCAGTGTC ACGAGAGACG TTTCTCGCTT ACTATACAGG GCCAAAGCGC
ACCATGTATG AGAAAGCGGT GAATTCCCTC TACGAAATGC CTGTCTCATA CGACGATGCT AAACTGAAAA
CATTTGTAAA AGCAGAAAAG ATCAATCTCA CTAAGAAAGC TGATCCTGTA CCACGTGTGA TCCAGCCCCG
TGCTCCCCGG TATAATGTGG AACTGGGTAG GTATCTGAGA CCGGTTGAGC ACCCAATCTA CCATGCTATA
GACAAGATTT GGGGTGGTCC GACTATTATG AAAGGTTACT CGGTTGAACA GATTGGAAGA CATATTGAGA
ACGCGTTCCG ATCGTTCACC GATCCAGTGG CCATTGGATT TGATGCAAGT CGGTTTGATC AACACGTGAG
TGTTGAAGCT CTACGCTGGG AACATAGCGT ATACTCACGG ATTTATGGCT ATCCAGAGCT TCTCACACAA
TTGCTGCGGT GGCAGATTCA TAATCGCGGA ACAGCATATG CCTCAGACGG CGCGTTCAAC TACCAGGTGG
ATGGTAAACG CATGAGTGGG GACATGAACA TATCATTGGG CAATTGCATA CTGGCCACAG CAATCACACA
TGACTTCGTG ACCAAGCTGG GAATTCCAGC CAGATTAATC AACAATGGAG ATGACAACGT CCTGATCTGT
CCGGCAGTGG AGGTAGGCAG AGTCAGACAG GAACTGTACA GACATTGGTT GAACTACGGA TTTGAAGTCA
TATCAGAAGA ACCTGTGTAC ATCCTTGAAC AGGTTGAATT TTGCCAGATG CGACCAGTCT TCGACGGTAC
ACAATACACC ATGATGAGAG ACCCTCGCAC CACCATGTCC AAAGATGCCT ATGCTGTAAC CCCTTTTAAC
ACACCAACCG CAGCAAGGAG GTGGATGAGA GCAGTTGGGG AATGCGGACT CAGCCTTACA GGAGGCCTCC
CCGTAAAGCA GGAATACTAT ACTGCTCTTG TAAAACACGG ACTAGATCCG AAAAACATCA AACAGGGAAA
AGACTTTGAC AGTGGGCTAT ACTATCTTAG CAAGTTATCC AATCGCAAAT GGCAGGAGGT CCAAGAGAGC
GCCCGCTACT CATTCTGGCT TGCTTTCGGG TACACACCAG ATGAACAACG AGCGTTAGAG GAGTATTTTA
AATCTTGGAC CCCTACGTTT GAATGGTCCA CAACGGGTAT TTTGGCAGAA ATTCCCGAAT GTCTTCTTCT
CAAACACAAT CCCCTCCCAC CGACGTAG
Product
| Product | RdRp |
| Description | RNA-dependent RNA polymerase |
| Modifications | 1315..1317,aa:OTHER |
MATLPSIHAF WKLWWPTFSE ERKMTVVQAL RNGLTRKLFQ ITQIAQQILR WPPYIRERMT SSLGQSLVKT
FQTLLGIRKA LSRLCLTRNM NVDIFTMLLI PFKFLSQLCS QIVASANFVI QTFRHGLSRG LCLARCRNPE
TMRSGWSKHT LQMQNCSSTS PLMTPFQPQI ARDLSNPHGL WMSTRNKLTR TGGSAIQQTS RYVRLAVRFS
LLAAGAYISC VLARKALKEY VYRWELKSDQ ELPTREQSQI SQVEQAMEQN GAMMVMKLNG PTAPILSLQD
CLTKHVLVPE IVDEEGTVTQ KEQSTFLIRE FGPAVRNLVT LAKLEFGGIP KKTTANELTV WRFLVRKCEH
ANMNPTDSRT AISMALPYVF MPCRTDVGRA SIPLRDESIE ICRQYRAQFV EETPLRRVFN NPLSGKAWRN
WVRHLGGLDD PALFQELKQG CLEEWLGVQS RRTRARHPKL RSHFKDTRHK TRRVFRIAGL GNLYEFGVHN
NSAVNLERGL MERVFYVKDD KGELVSCPEP ISGIFWKNLK GFRNSIVHHV GHRHPVSRET FLAYYTGPKR
TMYEKAVNSL YEMPVSYDDA KLKTFVKAEK INLTKKADPV PRVIQPRAPR YNVELGRYLR PVEHPIYHAI
DKIWGGPTIM KGYSVEQIGR HIENAFRSFT DPVAIGFDAS RFDQHVSVEA LRWEHSVYSR IYGYPELLTQ
LLRWQIHNRG TAYASDGAFN YQVDGKRMSG DMNISLGNCI LATAITHDFV TKLGIPARLI NNGDDNVLIC
PAVEVGRVRQ ELYRHWLNYG FEVISEEPVY ILEQVEFCQM RPVFDGTQYT MMRDPRTTMS KDAYAVTPFN
TPTAARRWMR AVGECGLSLT GGLPVKQEYY TALVKHGLDP KNIKQGKDFD SGLYYLSKLS NRKWQEVQES
ARYSFWLAFG YTPDEQRALE EYFKSWTPTF EWSTTGILAE IPECLLLKHN PLPPT
Publications
- Nutter RC, Scheets K, Panganiban LC, Lommel SA. (1989) The complete nucleotide sequence of the maize chlorotic mottle virus genome. Nucleic Acids Res. 17(8):3163-3177. [abstract]
- Harrell L, Melcher U, Atkins JF. (2002) Predominance of six different hexanucleotide recoding signals 3' of read-through stop codons. Nucleic Acids Res. 30(9):2011-2017. [abstract]